Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_L23
         (1047 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   0.70 
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    23   0.93 
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    26   2.1  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 27.5 bits (58), Expect = 0.70
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = +1

Query: 748 GGXXXPPPPPPP 783
           GG   PPPPPPP
Sbjct: 525 GGPLGPPPPPPP 536



 Score = 23.8 bits (49), Expect = 8.7
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +1

Query: 745 GGGXXXPPPPPP 780
           GG    PPPPPP
Sbjct: 525 GGPLGPPPPPPP 536


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 22.6 bits (46), Expect(2) = 0.93
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2

Query: 794 PXXXGGGGGGG 762
           P   GGGGGGG
Sbjct: 10  PLRAGGGGGGG 20



 Score = 22.6 bits (46), Expect(2) = 0.93
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2

Query: 782 GGGGGGGXXXP 750
           GGGGGGG   P
Sbjct: 16  GGGGGGGGGGP 26


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 25.8 bits (54), Expect = 2.1
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +1

Query: 745 GGGXXXPPPPPPP 783
           G G   PPPPPPP
Sbjct: 779 GIGSPPPPPPPPP 791


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 547,905
Number of Sequences: 2352
Number of extensions: 8805
Number of successful extensions: 136
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 113
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 116341017
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)