Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_L23
(1047 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 27 0.20
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 27 0.20
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 27 0.20
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 25 0.96
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 25 0.97
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 25 1.1
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 31 1.4
U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical pr... 25 2.9
U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical pr... 25 2.9
U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical pr... 25 2.9
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 26 6.4
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 26 6.4
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 7.3
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 7.3
Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical p... 28 9.6
AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (... 28 9.6
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 27.5 bits (58), Expect(2) = 0.20
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +1
Query: 748 GGXXXPPPPPPP 783
GG PPPPPPP
Sbjct: 766 GGCPPPPPPPPP 777
Score = 25.0 bits (52), Expect(2) = 0.20
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 763 PPPPPPPXXXG 795
PPPPPPP G
Sbjct: 769 PPPPPPPPPGG 779
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 27.5 bits (58), Expect(2) = 0.20
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +1
Query: 748 GGXXXPPPPPPP 783
GG PPPPPPP
Sbjct: 766 GGCPPPPPPPPP 777
Score = 25.0 bits (52), Expect(2) = 0.20
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 763 PPPPPPPXXXG 795
PPPPPPP G
Sbjct: 769 PPPPPPPPPGG 779
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 27.5 bits (58), Expect(2) = 0.20
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +1
Query: 748 GGXXXPPPPPPP 783
GG PPPPPPP
Sbjct: 349 GGCPPPPPPPPP 360
Score = 25.0 bits (52), Expect(2) = 0.20
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 763 PPPPPPPXXXG 795
PPPPPPP G
Sbjct: 352 PPPPPPPPPGG 362
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 25.0 bits (52), Expect(2) = 0.96
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 751 GXXXPPPPPPP 783
G PPPPPPP
Sbjct: 806 GAPPPPPPPPP 816
Score = 25.0 bits (52), Expect(2) = 0.96
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 763 PPPPPPPXXXG 795
PPPPPPP G
Sbjct: 808 PPPPPPPPPGG 818
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 25.0 bits (52), Expect(2) = 0.97
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 751 GXXXPPPPPPP 783
G PPPPPPP
Sbjct: 806 GAPPPPPPPPP 816
Score = 25.0 bits (52), Expect(2) = 0.97
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 763 PPPPPPPXXXG 795
PPPPPPP G
Sbjct: 808 PPPPPPPPPGG 818
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 25.0 bits (52), Expect(2) = 1.1
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 751 GXXXPPPPPPP 783
G PPPPPPP
Sbjct: 48 GCAPPPPPPPP 58
Score = 25.0 bits (52), Expect(2) = 1.1
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 763 PPPPPPPXXXG 795
PPPPPPP G
Sbjct: 53 PPPPPPPPMCG 63
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 31.1 bits (67), Expect = 1.4
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 745 GGGXXXPPPPPPPXXXG 795
GGG PPPPPPP G
Sbjct: 48 GGGYEAPPPPPPPSYAG 64
>U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical
protein ZK180.5a protein.
Length = 542
Score = 25.0 bits (52), Expect(2) = 2.9
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 763 PPPPPPPXXXG 795
PPPPPPP G
Sbjct: 66 PPPPPPPAFGG 76
Score = 23.4 bits (48), Expect(2) = 2.9
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 745 GGGXXXPPPPPP 780
G G PPPPPP
Sbjct: 61 GYGAPPPPPPPP 72
>U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical
protein ZK180.5b protein.
Length = 497
Score = 25.0 bits (52), Expect(2) = 2.9
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 763 PPPPPPPXXXG 795
PPPPPPP G
Sbjct: 66 PPPPPPPAFGG 76
Score = 23.4 bits (48), Expect(2) = 2.9
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 745 GGGXXXPPPPPP 780
G G PPPPPP
Sbjct: 61 GYGAPPPPPPPP 72
>U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical
protein ZK180.5c protein.
Length = 399
Score = 25.0 bits (52), Expect(2) = 2.9
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 763 PPPPPPPXXXG 795
PPPPPPP G
Sbjct: 66 PPPPPPPAFGG 76
Score = 23.4 bits (48), Expect(2) = 2.9
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 745 GGGXXXPPPPPP 780
G G PPPPPP
Sbjct: 61 GYGAPPPPPPPP 72
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 25.8 bits (54), Expect(2) = 6.4
Identities = 11/31 (35%), Positives = 11/31 (35%)
Frame = +1
Query: 691 PPPXFXFXXKKKXKXXXXGGGXXXPPPPPPP 783
PPP G PPPPPPP
Sbjct: 284 PPPMPPTPGMTPRPPPPPSSGMWPPPPPPPP 314
Score = 21.4 bits (43), Expect(2) = 6.4
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +1
Query: 763 PPPPPPPXXXG 795
PPPPPP G
Sbjct: 309 PPPPPPGRTPG 319
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 25.8 bits (54), Expect(2) = 6.4
Identities = 11/31 (35%), Positives = 11/31 (35%)
Frame = +1
Query: 691 PPPXFXFXXKKKXKXXXXGGGXXXPPPPPPP 783
PPP G PPPPPPP
Sbjct: 274 PPPMPPTPGMTPRPPPPPSSGMWPPPPPPPP 304
Score = 21.4 bits (43), Expect(2) = 6.4
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +1
Query: 763 PPPPPPPXXXG 795
PPPPPP G
Sbjct: 299 PPPPPPGRTPG 309
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.7 bits (61), Expect = 7.3
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 745 GGGXXXPPPPPPPXXXG 795
G G PPPPPPP G
Sbjct: 645 GAGAPPPPPPPPPSGAG 661
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 28.7 bits (61), Expect = 7.3
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 745 GGGXXXPPPPPPPXXXG 795
G G PPPPPPP G
Sbjct: 471 GAGAPPPPPPPPPSGAG 487
>Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical
protein F47B8.14 protein.
Length = 255
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -2
Query: 782 GGGGGGGXXXPPP 744
GGGGGGG PPP
Sbjct: 31 GGGGGGGDAAPPP 43
>AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (grd
related) protein19 protein.
Length = 157
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -2
Query: 782 GGGGGGGXXXPPP 744
GGGGGGG PPP
Sbjct: 35 GGGGGGGCCAPPP 47
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,026,798
Number of Sequences: 27780
Number of extensions: 243714
Number of successful extensions: 2733
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1801
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2782955308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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