Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_L22
         (911 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0900 + 29232365-29232931                                         29   3.9  
01_07_0021 - 40533864-40534583,40534779-40534814,40534909-405350...    29   5.1  
09_01_0140 + 2083885-2083969,2084178-2084653                           29   6.8  
04_03_0584 + 17546945-17547382                                         29   6.8  
03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343     29   6.8  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   9.0  
08_02_0969 - 23126389-23126670,23126764-23126947,23127017-231278...    28   9.0  
06_03_0223 - 18391177-18391287,18391570-18392081,18392200-183930...    28   9.0  

>04_04_0900 + 29232365-29232931
          Length = 188

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -2

Query: 703 RRGERRTGIPVSGRVGTGERTRELPGETPG 614
           R G R +GIP SGR G+G   + + G   G
Sbjct: 115 RGGRRCSGIPASGRSGSGRLGKSMDGRRRG 144


>01_07_0021 -
           40533864-40534583,40534779-40534814,40534909-40535048,
           40535837-40535922,40536430-40536653,40536770-40536865,
           40538766-40538833,40539945-40540055,40540799-40540955
          Length = 545

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
 Frame = +3

Query: 528 FHRLRPPDEHHKNRRSSXXWRXPTGL*XXPGVSPGSSLVRS--PVPTLPLTGIPVRLSPL 701
           F +  PP EH     S+     PT     P V P      S  P+P+ P  G+PV   P+
Sbjct: 427 FEQPPPPPEHPPPPESTSPPPPPTS--DPPPVPPPPPTTGSFMPIPSAPFAGLPVPAGPM 484


>09_01_0140 + 2083885-2083969,2084178-2084653
          Length = 186

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = -3

Query: 558 DARQGGGAYGKRQQRXXLRFLAFCWPFAHMFFPALSPDSVDNRITAF 418
           D+ +GGGA G   ++    F  F W FA    P L+ DS     ++F
Sbjct: 14  DSPRGGGAGGPAGEQAATSFQIFLWSFACTPPPRLALDSPSAPASSF 60


>04_03_0584 + 17546945-17547382
          Length = 145

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
 Frame = -1

Query: 719 KRHGXPKGRKADR-YSGKRQGRNR--RAHEGASRG 624
           +R G PKGR+  R + G+R  R R  R ++ A RG
Sbjct: 15  RRKGWPKGRRRQRGWRGRRNARRRGLRTNQRAGRG 49


>03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343
          Length = 356

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
 Frame = +3

Query: 351 PLPRSLTRCARSF--GCGERYQLTQRR*YGYPQNQGITQ--ERTCEQKASKRPGTV 506
           P PRS  RC      GCG R Q TQR     P N  IT   E TC   ++  P  +
Sbjct: 150 PYPRSYYRCTHKLDQGCGARRQ-TQRC-EADPSNYDITYYGEHTCRDPSTIIPTAI 203


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +3

Query: 300 NESAN---ARGEAVCVLGALPLPRSLTRCAR 383
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>08_02_0969 -
           23126389-23126670,23126764-23126947,23127017-23127834,
           23127953-23128642
          Length = 657

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = -1

Query: 716 RHGXPKGRKADRYSGKRQGRNRRAHEGASRGNAW 615
           RHG    R+ D     R+G+    H  A RG  W
Sbjct: 292 RHGDRDDRRDDARRRDRKGKYNNDHPDADRGRGW 325


>06_03_0223 -
           18391177-18391287,18391570-18392081,18392200-18393019,
           18393603-18393671,18393973-18394062,18395381-18395575
          Length = 598

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +2

Query: 629 WKLPRALSCSDPAAYRNTCPPFSPSGN 709
           W   RA SCSDPAA     PP S +G+
Sbjct: 2   WLATRASSCSDPAA-AGLVPPKSAAGD 27


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,178,950
Number of Sequences: 37544
Number of extensions: 356447
Number of successful extensions: 1069
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1037
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1068
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)