Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_L17
(875 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_02_0495 + 9880714-9881196 32 0.52
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 30 2.8
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 29 3.7
09_02_0327 - 7284829-7284889,7284946-7286126 29 4.9
07_01_0479 + 3606663-3607448 29 4.9
06_01_0760 - 5676973-5677830 29 4.9
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 29 4.9
01_01_0570 - 4231100-4232560 29 4.9
07_01_0080 + 587674-588510 29 6.5
05_03_0176 + 9240573-9241043 29 6.5
04_04_0233 + 23801944-23802598,23802914-23803047,23803548-238037... 29 6.5
04_01_0197 + 2323790-2324098,2324145-2324774 29 6.5
03_02_0784 - 11154395-11154888,11155284-11155360,11155447-111554... 29 6.5
02_05_0686 - 30900748-30902167,30903442-30904742 29 6.5
09_04_0684 - 19442335-19442990,19443774-19443839,19443935-194440... 28 8.5
05_07_0332 - 29332520-29332818,29333511-29333725,29334380-293344... 28 8.5
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 28 8.5
03_05_0630 + 26260159-26260272,26260520-26260894 28 8.5
02_01_0129 - 934865-935152,935241-935490,935965-936105,937175-93... 28 8.5
01_05_0490 + 22672241-22674679 28 8.5
01_01_1162 - 9253034-9254229,9254387-9254456,9254473-9254567,925... 28 8.5
>09_02_0495 + 9880714-9881196
Length = 160
Score = 32.3 bits (70), Expect = 0.52
Identities = 19/41 (46%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Frame = -2
Query: 511 GGGPGXXGGXRGG--PPIGXXFXPG-FARXFKGKXPXNPSP 398
GGG G GG GG PP PG FA F G P P+P
Sbjct: 65 GGGDGGAGGLFGGTYPPPPPGVMPGAFAPPFGGGFPYGPAP 105
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +3
Query: 429 KXRANPG*KXXPIGGPPRXPPXXPGPPP 512
K A PG GGPPR PP PPP
Sbjct: 249 KPPAAPGTLPNGSGGPPRPPPPQVPPPP 276
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 462 PIGGPPRXPPXXPGPPPXPXGK 527
P PP PP P PPP P K
Sbjct: 108 PTPAPPLPPPPAPAPPPTPTPK 129
>09_02_0327 - 7284829-7284889,7284946-7286126
Length = 413
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 474 PPRXPPXXPGPPPXPXGK 527
PP PP P PPP P G+
Sbjct: 53 PPPPPPPPPPPPPPPRGR 70
>07_01_0479 + 3606663-3607448
Length = 261
Score = 29.1 bits (62), Expect = 4.9
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 462 PIGGPPRXPPXXPGPPPXPXG 524
P PP PP PG PP P G
Sbjct: 186 PFQRPPGVPPAFPGGPPPPPG 206
>06_01_0760 - 5676973-5677830
Length = 285
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -2
Query: 517 GXGGGPGXXGGXRGGPPIGXXFXPGFAR 434
G GGG G GG GG G F G+ +
Sbjct: 113 GEGGGGGGGGGQNGGSGYGSGFGSGYGQ 140
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 29.1 bits (62), Expect = 4.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 462 PIGGPPRXPPXXPGPPPXPXGK 527
P PP PP P PPP P K
Sbjct: 345 PSNAPPPPPPPPPPPPPPPPPK 366
>01_01_0570 - 4231100-4232560
Length = 486
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -2
Query: 517 GXGGGPGXXGGXRGGPPIGXXFXPGF 440
G GGG G GG RGG +G GF
Sbjct: 131 GSGGGVGAGGGLRGGGGVGAGGGGGF 156
>07_01_0080 + 587674-588510
Length = 278
Score = 28.7 bits (61), Expect = 6.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 468 GGPPRXPPXXPGPPPXP 518
G PP PP P PPP P
Sbjct: 102 GSPPPPPPPPPPPPPPP 118
>05_03_0176 + 9240573-9241043
Length = 156
Score = 28.7 bits (61), Expect = 6.5
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -1
Query: 617 FWAFXXDFXXXGFSRGFGXPRXPPFXGP 534
F DF GF RG+G P PP P
Sbjct: 123 FTGLPPDFDFFGFGRGYGYPPPPPPEDP 150
>04_04_0233 +
23801944-23802598,23802914-23803047,23803548-23803730,
23804145-23804318
Length = 381
Score = 28.7 bits (61), Expect = 6.5
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 471 GPPRXPPXXPGPPPXP 518
GPP PP P PPP P
Sbjct: 26 GPPPPPPSDPPPPPPP 41
>04_01_0197 + 2323790-2324098,2324145-2324774
Length = 312
Score = 28.7 bits (61), Expect = 6.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 468 GGPPRXPPXXPGPPPXP 518
G PP PP P PPP P
Sbjct: 25 GNPPPPPPPPPPPPPPP 41
>03_02_0784 -
11154395-11154888,11155284-11155360,11155447-11155497,
11155599-11155672,11156127-11156215,11156533-11156618,
11157570-11157669,11158540-11158622,11158776-11159194
Length = 490
Score = 28.7 bits (61), Expect = 6.5
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 471 GPPRXPPXXPGPPPXP 518
GPP PP P PPP P
Sbjct: 423 GPPYAPPPPPPPPPPP 438
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 28.7 bits (61), Expect = 6.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 468 GGPPRXPPXXPGPPPXP 518
G PP PP P PPP P
Sbjct: 352 GPPPPPPPKGPSPPPPP 368
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 462 PIGGPPRXPPXXPGPPPXPXG 524
P G PP P P PPP P G
Sbjct: 341 PKGPPPPPPAKGPPPPPPPKG 361
>09_04_0684 -
19442335-19442990,19443774-19443839,19443935-19444032,
19444787-19445157
Length = 396
Score = 28.3 bits (60), Expect = 8.5
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = -2
Query: 523 PXGXGGGPGXXGGXRGGPPIGXXFXPGFARXFKGKXPXNPS 401
P GGGPG G G PP PG+A + G+ NPS
Sbjct: 335 PGYQGGGPGYQG---GNPPPYQGGNPGYAPGYHGQG-GNPS 371
>05_07_0332 - 29332520-29332818,29333511-29333725,29334380-29334408,
29334956-29335045,29335120-29335155,29335222-29336553,
29337331-29337497,29337519-29337724,29337815-29338036,
29338332-29338381,29338754-29338870,29339471-29339551,
29339656-29339694,29340464-29340636,29340769-29340826,
29340934-29340987,29341066-29341613,29341695-29341755,
29342180-29342260,29342448-29342630,29342908-29343162,
29343304-29343423,29343497-29344901,29344988-29345085,
29345164-29345218,29345307-29345366,29346498-29346697
Length = 2077
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 462 PIGGPPRXPPXXPGPPPXPXGK 527
P+ G P+ PP P PPP P K
Sbjct: 1939 PVEGKPKPPPHAP-PPPPPEAK 1959
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 28.3 bits (60), Expect = 8.5
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Frame = +3
Query: 423 PLKXRANPG*KXXPIGGP-PRXPPXXPG-PPPXPXGK 527
P + G P G P P PP PG PPP P G+
Sbjct: 1188 PPRGHGGVGGPPTPPGAPAPPMPPGVPGGPPPPPGGR 1224
>03_05_0630 + 26260159-26260272,26260520-26260894
Length = 162
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -2
Query: 517 GXGGGPGXXGGXRGGPPIGXXFXPGFAR 434
G GGG G GG RGG G G+ R
Sbjct: 95 GYGGGGGGYGGGRGGGGYGGGGGGGYGR 122
>02_01_0129 -
934865-935152,935241-935490,935965-936105,937175-937707
Length = 403
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 462 PIGGPPRXPPXXPGPPPXPXG 524
P PPR PP P P P P G
Sbjct: 23 PSPPPPRPPPHQPQPQPLPCG 43
>01_05_0490 + 22672241-22674679
Length = 812
Score = 28.3 bits (60), Expect = 8.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 462 PIGGPPRXPPXXPGPPP 512
P PPR PP P PPP
Sbjct: 599 PAPAPPRRPPPPPPPPP 615
>01_01_1162 -
9253034-9254229,9254387-9254456,9254473-9254567,
9255344-9255487,9255514-9255622
Length = 537
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +3
Query: 420 FPLKXRANPG*KXXPIGGPPRXPPXXPGPPPXPXG 524
FPL A P P R PP P PPP G
Sbjct: 183 FPLLATAVAAAAAAPFPAPTRRPPPPPPPPPRCPG 217
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,182,139
Number of Sequences: 37544
Number of extensions: 142813
Number of successful extensions: 1930
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 958
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1677
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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