Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_L16
(904 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 136 1e-30
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 108 2e-22
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 79 2e-13
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 72 2e-11
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 64 4e-09
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 63 1e-08
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 58 3e-07
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 56 1e-06
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 48 4e-04
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.002
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 44 0.004
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 41 0.038
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.087
UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 34 5.7
UniRef50_A3N6N0 Cluster: Putative uncharacterized protein; n=4; ... 34 5.7
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 5.7
UniRef50_UPI0000491AEB Cluster: PREDICTED: hypothetical protein;... 33 10.0
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 136 bits (328), Expect = 1e-30
Identities = 57/68 (83%), Positives = 59/68 (86%)
Frame = +2
Query: 626 FPLESSSCALLFRPCRLPDTCPPFSLREAWRFLIAHAVXFSXRCXSFAPXWAVCPNPPFN 805
FPLE+ SCALLFRPCRLPDTCPPFSLREAWRFLIAHAV S RC SFAP WAVC NPPF+
Sbjct: 48 FPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFS 107
Query: 806 PTGGPYPV 829
PT PYPV
Sbjct: 108 PTAAPYPV 115
Score = 87.4 bits (207), Expect = 4e-16
Identities = 47/78 (60%), Positives = 52/78 (66%)
Frame = +3
Query: 489 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVKGGETRQDYKDTRRFPWKAPRALSCSDP 668
SK+ T R RFSIGSAPLTSITKIDAQV+GGETRQDYKDTRRFP +AP P
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61
Query: 669 AAYRIPVRLSPFGKRGAF 722
R+P PF R A+
Sbjct: 62 C--RLPDTCPPFSLREAW 77
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 108 bits (260), Expect = 2e-22
Identities = 68/134 (50%), Positives = 78/134 (58%)
Frame = +3
Query: 321 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQNQGITQERTCEQKASKRP 500
R +C G +PLPRSLTR ARSFGCGERY+LT G E T + SK
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDT-RKTLSKEE 76
Query: 501 GTVKRPRCWRFSIGSAPLTSITKIDAQVKGGETRQDYKDTRRFPWKAPRALSCSDPAAYR 680
RPR RFSIGSAPLTSI K DAQ+ GGETRQDYKD RRFP AP P +
Sbjct: 77 ---IRPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLP--FG 131
Query: 681 IPVRLSPFGKRGAF 722
+PV +G+ +F
Sbjct: 132 LPVSFRCYGRGFSF 145
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 78.6 bits (185), Expect = 2e-13
Identities = 37/46 (80%), Positives = 39/46 (84%)
Frame = +3
Query: 507 VKRPRCWRFSIGSAPLTSITKIDAQVKGGETRQDYKDTRRFPWKAP 644
V+ PR RFSIGSAPLTSITK DAQ+ GGETRQDYKDTRRFP AP
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAP 89
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 71.7 bits (168), Expect = 2e-11
Identities = 33/37 (89%), Positives = 35/37 (94%)
Frame = +1
Query: 646 VRSPVPTLPLTGYLSAFLPSGSVALSHSSRCXFLXSV 756
+RSPVPTLPLTGYLSAFLPSGSVALSHSSRC +L SV
Sbjct: 1 MRSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 37
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 64.5 bits (150), Expect = 4e-09
Identities = 30/38 (78%), Positives = 30/38 (78%)
Frame = -3
Query: 497 PFAGLLLTCSFLRYPLILWITVLPPLSELIPLAAAERP 384
P LLTCSF YPLILWITVLPPLSEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 62.9 bits (146), Expect = 1e-08
Identities = 36/75 (48%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = -1
Query: 802 ERGVXAXSPXWSERXTPX*ETYSVSYEKAPRFPKGERRTGIR-*AAGSEQESARGAFQGK 626
ERGV A SP WSER P +T SVSYEKAPRFPKG++ + G + + GA K
Sbjct: 25 ERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQVSGKRQGRNRRAHEGAAGEK 84
Query: 625 RLVSL*SCRVSPPLT 581
SL PPLT
Sbjct: 85 SPASLSPVGFRPPLT 99
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 58.0 bits (134), Expect = 3e-07
Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +3
Query: 297 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 464
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 56.0 bits (129), Expect = 1e-06
Identities = 25/47 (53%), Positives = 28/47 (59%)
Frame = +2
Query: 689 PPFSLREAWRFLIAHAVXFSXRCXSFAPXWAVCPNPPFNPTGGPYPV 829
PPFSL + + S RC SFAP WAV NPPF+PT PYPV
Sbjct: 59 PPFSLAGSVALSHSSHSGISARCRSFAPSWAVSKNPPFSPTAAPYPV 105
Score = 40.3 bits (90), Expect = 0.066
Identities = 23/46 (50%), Positives = 26/46 (56%)
Frame = +3
Query: 582 VKGGETRQDYKDTRRFPWKAPRALSCSDPAAYRIPVRLSPFGKRGA 719
V+ GETRQD K P ALSCS+PA RIPV PF G+
Sbjct: 23 VRSGETRQDLKIITVSDESLPLALSCSNPAVSRIPV--PPFSLAGS 66
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 47.6 bits (108), Expect = 4e-04
Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = +3
Query: 396 CGERYQLTQRR*YG--YPQNQGITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITK 569
C R Q R G +P+N I +R + + + P T F S PLT+ITK
Sbjct: 22 CCHRQQCLLNRNLGLDHPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITK 81
Query: 570 IDAQVKGGETRQDYKDTRRFPWKAP 644
I Q K +T+ +YK T FP ++P
Sbjct: 82 IYPQFKNTQTQHNYKYTTPFPLQSP 106
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +3
Query: 99 DPDMIRYIDEFGQTTTRMQ 155
DPDMIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 44.4 bits (100), Expect = 0.004
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +2
Query: 416 HSKAVIRLSTESGDNAGKNM 475
HSKAVIRLSTESGDNAGKNM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 41.1 bits (92), Expect = 0.038
Identities = 22/41 (53%), Positives = 26/41 (63%)
Frame = +1
Query: 223 INKLTTTIAFILCFRFRGEVWEVFSALMNRPTRGERRFAYW 345
+++LT L RF V +ALMNRPTRGERRFAYW
Sbjct: 1 MSELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.087
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -1
Query: 367 ERGSGRAPNTQTASPRALADSLMQ 296
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_Q12GC2 Cluster: Putative uncharacterized protein
precursor; n=2; Polaromonas|Rep: Putative
uncharacterized protein precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 268
Score = 33.9 bits (74), Expect = 5.7
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -3
Query: 506 GSWPFAGLLLTCSFLRYP---LILWITVLPPLSELIPLAAAERP 384
G W +G L L++ LI+W+ LPPL++ IP+A+ + P
Sbjct: 158 GVWLSSGNALPWGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201
>UniRef50_A3N6N0 Cluster: Putative uncharacterized protein; n=4;
Burkholderia|Rep: Putative uncharacterized protein -
Burkholderia pseudomallei (strain 668)
Length = 755
Score = 33.9 bits (74), Expect = 5.7
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = -2
Query: 726 MRKRHASRREKGGQVSGKRQGRNRRAHEE 640
+R+R A RR GG+ G+R+GRNR+ ++
Sbjct: 355 VRRRAAPRRRHGGEWRGRRRGRNRKRRQQ 383
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.9 bits (74), Expect = 5.7
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -3
Query: 257 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 93
+MNA V + FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
>UniRef50_UPI0000491AEB Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 178
Score = 33.1 bits (72), Expect = 10.0
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = +1
Query: 601 DRTIKIPGVSPGKLLVRSPVPTLPLTGYLSAFLPSGSVALSHSSRCXFLXSVXVVRS 771
DR + PG+L VRSP P+ G +A P G + RC F + +V S
Sbjct: 86 DRRFRAAPGMPGQLWVRSPQPSFINAGPGAAQTPQGGPRVHRCPRCVFTQPLAIVFS 142
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 819,033,999
Number of Sequences: 1657284
Number of extensions: 16024248
Number of successful extensions: 44090
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 42004
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44068
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 81981722200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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