Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_L15
(893 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 54 1e-07
U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical pr... 50 2e-06
DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin p... 50 2e-06
U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical pr... 46 4e-05
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 39 0.004
Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical pr... 39 0.006
DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin p... 39 0.006
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 38 0.007
Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical pr... 34 0.12
Z30317-1|CAA82967.1| 213|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z81506-1|CAB04128.1| 555|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z81028-3|CAB02691.1| 545|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z74033-3|CAA98477.1| 407|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z54306-2|CAA91088.1| 260|Caenorhabditis elegans Hypothetical pr... 29 5.9
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein
H02I12.1 protein.
Length = 1319
Score = 54.4 bits (125), Expect = 1e-07
Identities = 27/64 (42%), Positives = 32/64 (50%)
Frame = +3
Query: 474 QTTPDCPHQYGIFKHPNASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPS 653
QT +C ++G F A NC + CV GR M CP G FNP S CDW VPS
Sbjct: 1240 QTNGECS-EHGSFI---ADANNCEVFYRCVWGRKVVMTCPSGTVFNPLLSVCDWPSAVPS 1295
Query: 654 CDAE 665
C +
Sbjct: 1296 CSGQ 1299
Score = 37.5 bits (83), Expect = 0.013
Identities = 26/104 (25%), Positives = 38/104 (36%), Gaps = 1/104 (0%)
Frame = +3
Query: 537 NCGQYRTCVGGRAFDMV-CPPGLAFNPDFSRCDWADLVPSCDAEKFLGFTCPPAPLDAIG 713
+C C GG F+ C LAFN +CD+ V C+ C G
Sbjct: 1195 DCSAILQCFGGELFEHPSCQSSLAFNQLTGKCDYPQKVSGCENHGQTNGEC-----SEHG 1249
Query: 714 NPLNNVINYKYEGNCYYFFSCEQNRAXLLSCDIGLAFXPTTGRC 845
+ + + NC F+ C R +++C G F P C
Sbjct: 1250 SFIADA------NNCEVFYRCVWGRKVVMTCPSGTVFNPLLSVC 1287
Score = 32.3 bits (70), Expect = 0.48
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 197 ARNGYYKTDAN-CDTYIECRDYQATNMICPDGLHFNPSVEWPAYPCGYPVEVTCVGRGS 370
+ +G + DAN C+ + C + M CP G FNP + +P P +C G+ S
Sbjct: 1246 SEHGSFIADANNCEVFYRCVWGRKVVMTCPSGTVFNPLLSVCDWPSAVP---SCSGQAS 1301
Score = 29.1 bits (62), Expect = 4.5
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +3
Query: 549 YRTCVGGRAFDMVCPPGLAFNPDFSRCDW 635
+ +C F CPPG FN + CD+
Sbjct: 209 FYSCSNNMVFQRYCPPGTVFNINQQSCDF 237
>U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical
protein B0280.5 protein.
Length = 524
Score = 50.4 bits (115), Expect = 2e-06
Identities = 40/123 (32%), Positives = 48/123 (39%), Gaps = 2/123 (1%)
Frame = +3
Query: 516 HPNASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSCDAEKFLGFTCPPA 695
HPN + + TC GG A M CP L FNP CDW V C G P
Sbjct: 255 HPNGVCST--NFLTCSGGIARIMDCPASLVFNPTILVCDWPRDVAEC-----AGLPTPQP 307
Query: 696 PLDAIGNPLNNVINYKYEGNC-YYFFSCEQNRAXLLSCDIGLAFXPTTGRC-VDXNRVXC 869
+ G Y G C F +C RA ++ C GL F +T RC + N C
Sbjct: 308 TCEEDG--------YFSFGQCSSSFTACTNGRAIVMFCPAGLKFSESTVRCDYESNVSEC 359
Query: 870 NAT 878
T
Sbjct: 360 QET 362
Score = 36.3 bits (80), Expect = 0.030
Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Frame = +3
Query: 426 SLSTFTELLLNISEPAQTTPDCPHQY-GIFKHPNASPTNCGQYRTCVGGRAFDMVCPPGL 602
+++ T L + Q DC + G++ P Q+ TC GG A M CP L
Sbjct: 3 TVAALTLLAFATAANGQFLQDCTNALDGLYALGECEP----QFLTCSGGIARIMDCPADL 58
Query: 603 AFNPDFSRCDWADLVPSCD 659
+N CDW V C+
Sbjct: 59 IYNEPLLICDWRHNVIGCE 77
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +3
Query: 702 DAIGNPLNNVINYKYE-GNC--YYFFSCEQNRAXLLSCDIGLAFXPTTGRCV 848
+ + N N+ + Y G C YYFF C N A LSC L + + +C+
Sbjct: 132 ETVENVCENLEDGAYSSGGCTTYYFF-CTTNTARFLSCPTPLFYDADSQKCI 182
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +3
Query: 549 YRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 656
Y C A + CP L ++ D +C W LV C
Sbjct: 155 YFFCTTNTARFLSCPTPLFYDADSQKCIWKSLVEEC 190
>DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin
proteoglycan-2 protein.
Length = 524
Score = 50.4 bits (115), Expect = 2e-06
Identities = 40/123 (32%), Positives = 48/123 (39%), Gaps = 2/123 (1%)
Frame = +3
Query: 516 HPNASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSCDAEKFLGFTCPPA 695
HPN + + TC GG A M CP L FNP CDW V C G P
Sbjct: 255 HPNGVCST--NFLTCSGGIARIMDCPASLVFNPTILVCDWPRDVAEC-----AGLPTPQP 307
Query: 696 PLDAIGNPLNNVINYKYEGNC-YYFFSCEQNRAXLLSCDIGLAFXPTTGRC-VDXNRVXC 869
+ G Y G C F +C RA ++ C GL F +T RC + N C
Sbjct: 308 TCEEDG--------YFSFGQCSSSFTACTNGRAIVMFCPAGLKFSESTVRCDYESNVSEC 359
Query: 870 NAT 878
T
Sbjct: 360 QET 362
Score = 36.3 bits (80), Expect = 0.030
Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Frame = +3
Query: 426 SLSTFTELLLNISEPAQTTPDCPHQY-GIFKHPNASPTNCGQYRTCVGGRAFDMVCPPGL 602
+++ T L + Q DC + G++ P Q+ TC GG A M CP L
Sbjct: 3 TVAALTLLAFATAANGQFLQDCTNALDGLYALGECEP----QFLTCSGGIARIMDCPADL 58
Query: 603 AFNPDFSRCDWADLVPSCD 659
+N CDW V C+
Sbjct: 59 IYNEPLLICDWRHNVIGCE 77
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +3
Query: 702 DAIGNPLNNVINYKYE-GNC--YYFFSCEQNRAXLLSCDIGLAFXPTTGRCV 848
+ + N N+ + Y G C YYFF C N A LSC L + + +C+
Sbjct: 132 ETVENVCENLEDGAYSSGGCTTYYFF-CTTNTARFLSCPTPLFYDADSQKCI 182
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +3
Query: 549 YRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 656
Y C A + CP L ++ D +C W LV C
Sbjct: 155 YFFCTTNTARFLSCPTPLFYDADSQKCIWKSLVEEC 190
>U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical
protein R02F2.4 protein.
Length = 431
Score = 46.0 bits (104), Expect = 4e-05
Identities = 35/133 (26%), Positives = 52/133 (39%), Gaps = 1/133 (0%)
Frame = +3
Query: 450 LLNISEPAQTTPDCPHQYGIFKHPNASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRC 629
+++ SE ++ +C G F S + + C G M CP GL F+ C
Sbjct: 226 VMDCSEKSEKPQNCGEVDGYFSFGRCSSS----FSACTNGIPIVMFCPDGLMFSEKNQMC 281
Query: 630 DWADLVPSCDAEKFLGFTCPPAPLDAIGNPLNNVINYKYEGNCY-YFFSCEQNRAXLLSC 806
D+ V CD E GF +A+ P N+ N Y +C SC+ R + C
Sbjct: 282 DYEWNVDECDLES-SGFMENYKASEAL-TPCTNMDNGLYALDCTPRVLSCQNGRENIFEC 339
Query: 807 DIGLAFXPTTGRC 845
L F + C
Sbjct: 340 PPSLVFNENSLIC 352
Score = 38.3 bits (85), Expect = 0.007
Identities = 31/110 (28%), Positives = 37/110 (33%), Gaps = 2/110 (1%)
Frame = +3
Query: 522 NASPTNCGQ-YRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSCDAEKFLGFTCPPAP 698
N S + C + +C G A CP L FNP S CDW V C + C
Sbjct: 184 NISKSECSNVFFSCSEGIAHRRNCPANLVFNPAISSCDWPKNVMDCSEKSEKPQNC---- 239
Query: 699 LDAIGNPLNNVINYKYEGNCYYFFS-CEQNRAXLLSCDIGLAFXPTTGRC 845
V Y G C FS C ++ C GL F C
Sbjct: 240 --------GEVDGYFSFGRCSSSFSACTNGIPIVMFCPDGLMFSEKNQMC 281
Score = 34.3 bits (75), Expect = 0.12
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Frame = +3
Query: 429 LSTFTELLLNISEP-AQTTPDCPHQY-GIFKHPNASPTNCGQYRTCVGGRAFDMVCPPGL 602
L T LLL IS ++ DC + G++ P ++ CV G A M CP L
Sbjct: 4 LPCLTTLLLTISTVNSKFVTDCTNVGDGMYPLGACEP----RFLACVSGEARYMDCPEDL 59
Query: 603 AFNPDFSRCDWADLVPSCDAE 665
++ + CDW V C E
Sbjct: 60 VYHKNLEFCDWRHNVFECGEE 80
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +3
Query: 555 TCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSCDAEKFL 674
+C GR CPP L FN + CD+ + C E L
Sbjct: 328 SCQNGRENIFECPPSLVFNENSLICDYPETSLKCCMEDAL 367
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 39.1 bits (87), Expect = 0.004
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +2
Query: 155 STPAAATAQNVICKARNGYYKTDANCDTYIECRDYQATNMICPDGLHFNPSVEW 316
+T A+ NV +G+Y NC ++ C ++ +M CP GL ++ S+++
Sbjct: 470 ATTTTASNTNVCSGKSDGFYPNSNNCGLFVLCLSSKSYSMSCPSGLQYSASLKY 523
Score = 37.5 bits (83), Expect = 0.013
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 531 PTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDWAD 641
P++C ++ CV G +++ CP GL+F+ D CD D
Sbjct: 575 PSDCLKFIRCVNGISYNFECPNGLSFHADTMMCDRPD 611
Score = 34.3 bits (75), Expect = 0.12
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 516 HPNASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRC 629
+PN++ NCG + C+ +++ M CP GL ++ C
Sbjct: 489 YPNSN--NCGLFVLCLSSKSYSMSCPSGLQYSASLKYC 524
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +2
Query: 137 AASHVQSTPAAATAQNVICKA-RNGYYKTDANCDTYIECRDYQATNMICPDGLHFN 301
+A V +T A T K ++G++ ++C +I C + + N CP+GL F+
Sbjct: 546 SAPTVTTTTRAPTTTTPAFKCTKDGFFGVPSDCLKFIRCVNGISYNFECPNGLSFH 601
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/47 (25%), Positives = 19/47 (40%)
Frame = +3
Query: 738 YKYEGNCYYFFSCEQNRAXLLSCDIGLAFXPTTGRCVDXNRVXCNAT 878
Y NC F C +++ +SC GL + + C C+ T
Sbjct: 489 YPNSNNCGLFVLCLSSKSYSMSCPSGLQYSASLKYCTTSTASGCSVT 535
>Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical
protein C07G2.1a protein.
Length = 584
Score = 38.7 bits (86), Expect = 0.006
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +3
Query: 468 PAQTTPDCPHQYGIFKHPNASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLV 647
PA+TT + P + A Y+ CV G+ +C GL F+P+ +RC AD +
Sbjct: 517 PAETTTEVP---ACVEGATAIEPCSQHYKNCVNGQEAIFICENGLFFSPEQARCAPADQI 573
Query: 648 PSC 656
C
Sbjct: 574 AEC 576
Score = 34.3 bits (75), Expect = 0.12
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 546 QYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 656
Q+ TC GG + M CP L ++P C+++ VP C
Sbjct: 77 QFLTCSGGISRIMDCPADLIYDPRIVACEYSYNVPQC 113
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +3
Query: 549 YRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 656
Y C G M CP LAF+ CD+ VP C
Sbjct: 231 YTACSNGYLIPMQCPARLAFDEARVICDYVMNVPEC 266
>DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin
proteoglycan-1 protein.
Length = 584
Score = 38.7 bits (86), Expect = 0.006
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +3
Query: 468 PAQTTPDCPHQYGIFKHPNASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLV 647
PA+TT + P + A Y+ CV G+ +C GL F+P+ +RC AD +
Sbjct: 517 PAETTTEVP---ACVEGATAIEPCSQHYKNCVNGQEAIFICENGLFFSPEQARCAPADQI 573
Query: 648 PSC 656
C
Sbjct: 574 AEC 576
Score = 34.3 bits (75), Expect = 0.12
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 546 QYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 656
Q+ TC GG + M CP L ++P C+++ VP C
Sbjct: 77 QFLTCSGGISRIMDCPADLIYDPRIVACEYSYNVPQC 113
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +3
Query: 549 YRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 656
Y C G M CP LAF+ CD+ VP C
Sbjct: 231 YTACSNGYLIPMQCPARLAFDEARVICDYVMNVPEC 266
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 38.3 bits (85), Expect = 0.007
Identities = 29/105 (27%), Positives = 42/105 (40%), Gaps = 2/105 (1%)
Frame = +3
Query: 540 CGQ-YRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSCDAEKFLGFTCPPAPLDAIGN 716
C Q Y C+ GR+ C PGL +N C + V +C K +D+ N
Sbjct: 902 CSQDYVQCMQGRSLISSCAPGLFYNEKNGMCAYKHTVDTCKIGKGSDI------IDS--N 953
Query: 717 PLNNVINYKYEGNC-YYFFSCEQNRAXLLSCDIGLAFXPTTGRCV 848
+ Y C Y+FSC + +SC L F + +CV
Sbjct: 954 ACFGKSDGYYSAGCSSYYFSCIDEQIRKMSCPNSLKFSKESEKCV 998
Score = 32.3 bits (70), Expect = 0.48
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +3
Query: 558 CVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 656
C G+ CP L FNP CD++ V C
Sbjct: 594 CANGQVVATTCPANLIFNPYVGECDYSTNVRDC 626
Score = 32.3 bits (70), Expect = 0.48
Identities = 23/99 (23%), Positives = 37/99 (37%)
Frame = +3
Query: 549 YRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSCDAEKFLGFTCPPAPLDAIGNPLNN 728
Y +C+ + M CP L F+ + +C + C L T P P D N
Sbjct: 971 YFSCIDEQIRKMSCPNSLKFSKESEKCVFPIDAKECSIATTLDRTPPAVPSDFCTIRSNG 1030
Query: 729 VINYKYEGNCYYFFSCEQNRAXLLSCDIGLAFXPTTGRC 845
+ + K ++ C+ RA +C L + T C
Sbjct: 1031 LHHLKMCSP--HYIVCDNGRAFSGTCIAPLVYNGDTQTC 1067
Score = 31.9 bits (69), Expect = 0.64
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +3
Query: 555 TCVGGRAFDMVCPPGLAFNPDFSRCDWAD 641
TC GRAF CP L FN CD+A+
Sbjct: 452 TCHDGRAFANDCPGDLVFNKATGTCDFAE 480
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +2
Query: 203 NGYYKTDANCDTY-IECRDYQATNMICPDGLHFNPSVEWPAYP 328
+GYY A C +Y C D Q M CP+ L F+ E +P
Sbjct: 960 DGYYS--AGCSSYYFSCIDEQIRKMSCPNSLKFSKESEKCVFP 1000
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 5/78 (6%)
Frame = +3
Query: 414 LLQSSLSTFTELLLNISEPAQTT-----PDCPHQYGIFKHPNASPTNCGQYRTCVGGRAF 578
L LS F ++ IS A+ P CP G++ +S +Y CV +
Sbjct: 13 LQMRQLSIFAAAVILISADAKNVLNPKGPPCPDGDGLYAVGCSS-----KYLQCVNNVEY 67
Query: 579 DMVCPPGLAFNPDFSRCD 632
+ CP GL F+ +RC+
Sbjct: 68 EQSCPEGLYFDRLLARCE 85
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 194 KARNGYYKTDANCDTYIECRDYQATNMICPDGLHFN 301
+ NG Y D D YI C +++ T CP GL ++
Sbjct: 790 RLENGNYGLDCE-DYYISCNNFETTINRCPAGLFYS 824
Score = 29.1 bits (62), Expect = 4.5
Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
Frame = +3
Query: 468 PAQTTPDCPHQYGIFKHPNAS-PTNCGQYR-TCVGGRAFDMVCPPGLAFNPDFSRCDWAD 641
P+ TTP H + N + +C Y +C CP GL ++ +RCD+ +
Sbjct: 775 PSVTTPSPQHAAFCERLENGNYGLDCEDYYISCNNFETTINRCPAGLFYSKLNNRCDYKE 834
Query: 642 LVPSCDAEKFLGFTCPPA 695
V C K T P A
Sbjct: 835 HVEDCPEYKPTPSTTPAA 852
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +3
Query: 549 YRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 656
Y C GRAF C L +N D C++ C
Sbjct: 1041 YIVCDNGRAFSGTCIAPLVYNGDTQTCNYKSTNKDC 1076
>Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical
protein C07G2.1b protein.
Length = 160
Score = 34.3 bits (75), Expect = 0.12
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 546 QYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 656
Q+ TC GG + M CP L ++P C+++ VP C
Sbjct: 77 QFLTCSGGISRIMDCPADLIYDPRIVACEYSYNVPQC 113
>Z30317-1|CAA82967.1| 213|Caenorhabditis elegans Hypothetical
protein T16G12.4 protein.
Length = 213
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +3
Query: 213 TKQTRIVIHTLNAGTIKLLT*YARMVCTLILAW 311
TK+T V+ TL TI L++ + CTLIL W
Sbjct: 70 TKETPFVLVTLAINTIVLISAITQDFCTLILTW 102
>Z81506-1|CAB04128.1| 555|Caenorhabditis elegans Hypothetical
protein F16H6.1 protein.
Length = 555
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +3
Query: 651 SCDAEKFLGFTCPPAPLDAI--GNPLNNVINYKYEGNCYY 764
S A K+L C L+ I P+ N ++Y GNCYY
Sbjct: 139 SSSAGKWLSGDCDAMILNFICETTPITNTCTFQYNGNCYY 178
>Z81028-3|CAB02691.1| 545|Caenorhabditis elegans Hypothetical
protein B0365.6 protein.
Length = 545
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 672 LGFTCPPAPLDAIGNPLNNVINYKYEGNCYY 764
L F C AP +P+ + +++Y GNCYY
Sbjct: 145 LNFICETAPT----SPITDTCSFQYNGNCYY 171
>Z74033-3|CAA98477.1| 407|Caenorhabditis elegans Hypothetical
protein F38B7.3 protein.
Length = 407
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 3/36 (8%)
Frame = +3
Query: 402 CSWILLQSSL---STFTELLLNISEPAQTTPDCPHQ 500
C WIL S S FTE+ + +PA P+ P Q
Sbjct: 112 CHWILFSSDSDIESWFTEITKTLPKPANPPPNAPQQ 147
>Z54306-2|CAA91088.1| 260|Caenorhabditis elegans Hypothetical
protein B0457.4 protein.
Length = 260
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = -2
Query: 475 WAGSEIFSKSSVNV-ERLDCSKIQEHYTNSLIQHTDAPSSYTCHFNWITARICRPFHAR 302
WA S + + + + E L C + + S I+H + C F+W + +P HA+
Sbjct: 59 WAESTVVTNETHCLCEILTCRNCNKSHKRSRIEHVEVSQ---CRFSWFKVSMKQPGHAK 114
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,418,573
Number of Sequences: 27780
Number of extensions: 502123
Number of successful extensions: 1434
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1431
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -