Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_L12
         (921 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC035561-1|AAH35561.1|  493|Homo sapiens hexosaminidase (glycosy...    32   3.4  
AF010310-1|AAC39529.1|  253|Homo sapiens p53 induced protein pro...    31   4.5  
Z48615-1|CAA88531.1|  953|Homo sapiens serine/threonine kinase w...    31   7.8  
X90846-1|CAA62351.1|  954|Homo sapiens mixed lineage kinase 2 pr...    31   7.8  

>BC035561-1|AAH35561.1|  493|Homo sapiens hexosaminidase (glycosyl
           hydrolase family 20, catalytic domain) containing
           protein.
          Length = 493

 Score = 31.9 bits (69), Expect = 3.4
 Identities = 31/116 (26%), Positives = 43/116 (37%), Gaps = 4/116 (3%)
 Frame = +3

Query: 516 RCWRFS----IGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRXCRLPXT 683
           RCWR +     GSAP T+     +  R   +    + +  +   APSC    R  RLP  
Sbjct: 320 RCWRATGMSLAGSAPTTASGS--SSTRSWFSTSSPQRSASWHSGAPSC----RSWRLP-- 371

Query: 684 CPPFSLREAWGXSXTSRCRYLXXXXXXXXXWAVCPNPPXXRPXALSGKIVXXPXGK 851
           C   S R  W       C             +    PP   P AL+G ++  P G+
Sbjct: 372 CSWLSTRMPWRSGWRKTCTPACSGCKLCCRTSARCLPPRCHPPALAGTLLRTPEGR 427


>AF010310-1|AAC39529.1|  253|Homo sapiens p53 induced protein
           protein.
          Length = 253

 Score = 31.5 bits (68), Expect = 4.5
 Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 6/92 (6%)
 Frame = +1

Query: 616 PGVSPWKLPRALS-CSXP----AAYRXPVRLSPFGKRGAXLIPHAVGISVRCXSSLQAGL 780
           P  +P  LP   + CS P    AA + P+    F       +   +G  VRC  +L   +
Sbjct: 160 PASTPSSLPAPPAPCSRPFNQQAASQTPILQHRFTFFHPTTLQSLLGGEVRCLPALAQSM 219

Query: 781 XAQTPLXPDRW-PYPVKLFXIXPVKTIXPWPP 873
             Q    PD     P++ F   P+K + P PP
Sbjct: 220 GTQVWAEPDTCLGQPLETFGNSPLKCVGPRPP 251


>Z48615-1|CAA88531.1|  953|Homo sapiens serine/threonine kinase with
           SH3 domain, leucine zipper domain and proline rich
           protein.
          Length = 953

 Score = 30.7 bits (66), Expect = 7.8
 Identities = 17/57 (29%), Positives = 29/57 (50%)
 Frame = -2

Query: 662 SEQESARGSFQGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATRPFYGSWP 492
           S+Q S+     G++P    +  GFA+ +   +F +A  GG +   +P + P Y S P
Sbjct: 582 SKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDGGSSVPPSPYSTPSYLSVP 638


>X90846-1|CAA62351.1|  954|Homo sapiens mixed lineage kinase 2
           protein.
          Length = 954

 Score = 30.7 bits (66), Expect = 7.8
 Identities = 17/57 (29%), Positives = 29/57 (50%)
 Frame = -2

Query: 662 SEQESARGSFQGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATRPFYGSWP 492
           S+Q S+     G++P    +  GFA+ +   +F +A  GG +   +P + P Y S P
Sbjct: 583 SKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDGGSSVPPSPYSTPSYLSVP 639


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,687,398
Number of Sequences: 237096
Number of extensions: 2471801
Number of successful extensions: 6492
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6492
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11992411152
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)