Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_L09
         (893 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    23   4.3  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    23   4.3  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    23   4.3  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   5.6  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   9.9  

>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 13/36 (36%), Positives = 16/36 (44%)
 Frame = +3

Query: 444 GGHASGFSHVTINEGTEKRLFQIKGKRNVRVKQVKP 551
           GG   G    T +E T   L   K +   RVK+ KP
Sbjct: 137 GGKGGGVIQGTASEATLVALLGAKARMIDRVKKEKP 172



 Score = 21.4 bits (43), Expect = 9.9
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +3

Query: 645 RMKAITVANQIKDQDHNGRADIEVVDSEAHDGIFDR 752
           R+KA    N+   +  NGR  I +V S+  D  F R
Sbjct: 410 RLKASNEINEALLKRLNGRGVIHLVPSKIRDVYFLR 445


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 16/63 (25%), Positives = 33/63 (52%)
 Frame = -1

Query: 650 HPLDSFRLLTHEDEDLMVYVQNEAVAVVQGLKCRFYLLNADVSFTLDLEESFLCSLIDRH 471
           +PL++F+L T   + L V+        V+    R Y +    SF +    +++C+L++ +
Sbjct: 5   NPLEAFKLNTFFLKALTVWH-------VENPTYRLYKIFVVFSFAVTFFSAWICALVNYN 57

Query: 470 VAE 462
           V+E
Sbjct: 58  VSE 60


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +1

Query: 331 ELGRRTIPGISGTAPRGPILRVQGSSW 411
           EL RRTI G+S       I+ VQ +S+
Sbjct: 313 ELNRRTILGVSNAVITFLIVMVQKASY 339


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +1

Query: 352  PGISG-TAPRGPILRVQGSSWNISRQPSAT*KADTPQAS 465
            P +S  T+PR P     GS    S  P+++ ++ TP+++
Sbjct: 911  PSVSPLTSPRQPAETHAGSPCRNSASPASSDRSGTPRST 949



 Score = 21.8 bits (44), Expect = 7.5
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -1

Query: 170 PVRSSQSSIFRDPASCR 120
           P  SS  SI  DP +CR
Sbjct: 61  PTPSSPRSISEDPLNCR 77


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +3

Query: 216 PILY*TPQAIRTV*HGTSTSGSAQGPART 302
           PIL  T     ++ + TSTS SA  P+ T
Sbjct: 149 PILTKTSPTPVSINNNTSTSSSASSPSVT 177


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,909
Number of Sequences: 336
Number of extensions: 4207
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24823920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)