Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_L09
         (893 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    27   0.77 
AY063776-1|AAL59658.1|  224|Anopheles gambiae glutathione S-tran...    24   5.4  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    23   9.5  
AF316635-1|AAG45163.1|  224|Anopheles gambiae glutathione S-tran...    23   9.5  

>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 27.1 bits (57), Expect = 0.77
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -1

Query: 203 RRDQTESSERRPVRSSQSSIFRDPA 129
           RR+Q  + +RRP R  Q  I  +PA
Sbjct: 113 RREQLRNEQRRPARLRQDQIIFEPA 137


>AY063776-1|AAL59658.1|  224|Anopheles gambiae glutathione
           S-transferase E1 protein.
          Length = 224

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = -1

Query: 449 SAF*VADGWREIFQELPWTRNIGPLGAVPLIPGIV 345
           S F    GW E  ++LP+   I   GA  L   IV
Sbjct: 181 SEFPRVHGWMERLKQLPYYEEINGAGATELAEFIV 215


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 23.4 bits (48), Expect = 9.5
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +2

Query: 368 QHREVQYYESKEVPGIFLASHPLLKRRTRLRLQ 466
           QH+E    +SKE+   +     LLK+   L+L+
Sbjct: 875 QHKEKMNSQSKELKAKYHQRDKLLKQNDELKLE 907


>AF316635-1|AAG45163.1|  224|Anopheles gambiae glutathione
           S-transferase E1 protein.
          Length = 224

 Score = 23.4 bits (48), Expect = 9.5
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = -1

Query: 449 SAF*VADGWREIFQELPWTRNIGPLGAVPLIPGIV 345
           S F    GW E  ++LP+   I   GA  L   IV
Sbjct: 181 SEFPRVHGWIERMKQLPYYEEINGAGATELAEFIV 215


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 879,128
Number of Sequences: 2352
Number of extensions: 18403
Number of successful extensions: 39
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 96334083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)