Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_L09
(893 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70755-3|CAA94782.1| 475|Caenorhabditis elegans Hypothetical pr... 96 3e-20
U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I ho... 58 6e-09
L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophi... 58 6e-09
U88311-8|AAB42341.2| 918|Caenorhabditis elegans Hypothetical pr... 36 0.039
Z81091-5|CAB03142.1| 768|Caenorhabditis elegans Hypothetical pr... 35 0.068
U64608-4|AAB04595.2| 282|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z66567-5|CAA91492.4| 757|Caenorhabditis elegans Hypothetical pr... 30 2.6
AF040654-4|AAN65303.2| 886|Caenorhabditis elegans Trp (transien... 29 3.4
U42835-6|AAA83589.2| 816|Caenorhabditis elegans Dehydrogenases,... 28 7.8
L23646-6|AAU87821.1| 469|Caenorhabditis elegans Hypothetical pr... 28 7.8
>Z70755-3|CAA94782.1| 475|Caenorhabditis elegans Hypothetical
protein K06A4.3 protein.
Length = 475
Score = 95.9 bits (228), Expect = 3e-20
Identities = 48/97 (49%), Positives = 57/97 (58%)
Frame = +2
Query: 107 AFADAGRKPGLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGDKDRLTWDIHFWLGS 286
A A+ G+K GL +WRI F VP+ G+FY GD+YI L D WD+HFWLG
Sbjct: 9 ALAEIGKKNGLLVWRINKFVLEPVPEVDHGVFYIGDAYIALYQKYDG---CWDVHFWLGK 65
Query: 287 RTSQDEAGAAAILTVNLDDEQFQGSAVQHREVQYYES 397
S DE G AAI TV +DD G QHRE+Q YES
Sbjct: 66 NASTDEIGVAAIKTVEIDD-SLGGIPTQHREIQNYES 101
Score = 85.8 bits (203), Expect = 4e-17
Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 3/139 (2%)
Frame = +3
Query: 375 ERSNITSPRKFLEYFSPAIRYLKGGHASGFSHVTIN-EGTEKRLFQIKGKRNVRVKQVKP 551
E N SP FL YF IRY+ GG+ SG+ HV + + LF KGKRNVR +V+
Sbjct: 95 EIQNYESPL-FLSYFPDGIRYVSGGYESGYRHVDDQFKNWKPHLFHCKGKRNVRCTEVEC 153
Query: 552 TFESLNNGDCFILDVDHQIFVFVGEKAKGVERMKAITVANQIKDQDHNGRADIEVVDSEA 731
SLN GD FILD+ ++V++ ++ +ER+K + A I D + G + ++D
Sbjct: 154 EVNSLNLGDVFILDLGKDLYVWMPPESGRLERIKGMARAKNIADHERMGIPKVHILDDVE 213
Query: 732 --HDGIFDRFFDALGSGNK 782
+D F +F + S K
Sbjct: 214 WDNDSTFWSYFGGVSSVRK 232
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +3
Query: 558 ESLNNGDCFILD-VDHQIFVFVGEKAKGVERMKAITVANQIKDQDH 692
E L+ D FILD ++ IFV++G + ER KA+ Q H
Sbjct: 277 EQLDPKDAFILDAINGGIFVWIGHECTLEERSKALIWGQNYLKQHH 322
>U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I
homolog protein.
Length = 1257
Score = 58.4 bits (135), Expect = 6e-09
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Frame = +2
Query: 116 DAGRKPGLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGD-KDRLTWDIHFWLGSRT 292
D G G+ +W IENF P + + G FY D+Y+VL TT + +L I +WLG
Sbjct: 503 DVGSDEGMWVWEIENFYPSIMDEAFHGQFYDADAYLVLKTTREASGQLRHAIFYWLGEHA 562
Query: 293 SQDEAGAAAILTVNLDDEQFQGSAVQHREVQYYESKEVPGIF 418
S D+ +A+ V L + + RE E++E +F
Sbjct: 563 SLDKGMCSAVHAVGLRN-HLNATCRTQREEMNDETEEFLTLF 603
Score = 47.6 bits (108), Expect = 1e-05
Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 4/118 (3%)
Frame = +3
Query: 372 TERSNITSP-RKFLEYFSPAIRYLKGGHA-SGFSHVTINEGTEKRLFQ--IKGKRNVRVK 539
T+R + +FL F I Y++GG SGF + T RL++ + G V ++
Sbjct: 587 TQREEMNDETEEFLTLFGEEIVYIEGGRTISGF-YTTEKPAHLTRLYRAGVNGTA-VEME 644
Query: 540 QVKPTFESLNNGDCFILDVDHQIFVFVGEKAKGVERMKAITVANQIKDQDHNGRADIE 713
V + ESL+ CF+LD I+++ G K++ KA A ++ +D G+++IE
Sbjct: 645 PVPLSVESLDPRFCFLLDAGETIWIWSGYKSRITVSNKARLFAERLNKRDRKGKSEIE 702
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +2
Query: 137 LEIWRIENFEPVAVPKTQFGLFYSGDSYIVL 229
+E + +E + V +P+ +FG+FY+ D Y+ L
Sbjct: 903 MESFVLEGKKFVKLPQKEFGIFYTMDCYVFL 933
>L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophila
flightless) homologprotein 1 protein.
Length = 1257
Score = 58.4 bits (135), Expect = 6e-09
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Frame = +2
Query: 116 DAGRKPGLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGD-KDRLTWDIHFWLGSRT 292
D G G+ +W IENF P + + G FY D+Y+VL TT + +L I +WLG
Sbjct: 503 DVGSDEGMWVWEIENFYPSIMDEAFHGQFYDADAYLVLKTTREASGQLRHAIFYWLGEHA 562
Query: 293 SQDEAGAAAILTVNLDDEQFQGSAVQHREVQYYESKEVPGIF 418
S D+ +A+ V L + + RE E++E +F
Sbjct: 563 SLDKGMCSAVHAVGLRN-HLNATCRTQREEMNDETEEFLTLF 603
Score = 47.6 bits (108), Expect = 1e-05
Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 4/118 (3%)
Frame = +3
Query: 372 TERSNITSP-RKFLEYFSPAIRYLKGGHA-SGFSHVTINEGTEKRLFQ--IKGKRNVRVK 539
T+R + +FL F I Y++GG SGF + T RL++ + G V ++
Sbjct: 587 TQREEMNDETEEFLTLFGEEIVYIEGGRTISGF-YTTEKPAHLTRLYRAGVNGTA-VEME 644
Query: 540 QVKPTFESLNNGDCFILDVDHQIFVFVGEKAKGVERMKAITVANQIKDQDHNGRADIE 713
V + ESL+ CF+LD I+++ G K++ KA A ++ +D G+++IE
Sbjct: 645 PVPLSVESLDPRFCFLLDAGETIWIWSGYKSRITVSNKARLFAERLNKRDRKGKSEIE 702
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +2
Query: 137 LEIWRIENFEPVAVPKTQFGLFYSGDSYIVL 229
+E + +E + V +P+ +FG+FY+ D Y+ L
Sbjct: 903 MESFVLEGKKFVKLPQKEFGIFYTMDCYVFL 933
>U88311-8|AAB42341.2| 918|Caenorhabditis elegans Hypothetical
protein C10H11.1 protein.
Length = 918
Score = 35.9 bits (79), Expect = 0.039
Identities = 24/94 (25%), Positives = 44/94 (46%)
Frame = +3
Query: 396 PRKFLEYFSPAIRYLKGGHASGFSHVTINEGTEKRLFQIKGKRNVRVKQVKPTFESLNNG 575
P K LE AI ++G S ++ + L Q++G +NV V+ V P S++
Sbjct: 187 PEK-LETQEQAIAAIQGAKQLLKSPTKVSPYPDVMLIQVRGSKNVDVRLVAPAMSSVHEV 245
Query: 576 DCFILDVDHQIFVFVGEKAKGVERMKAITVANQI 677
CF++ + + G + +E+ KA + +I
Sbjct: 246 ACFVVVHQKHLMKYEGLYSNILEKTKASQLCIEI 279
>Z81091-5|CAB03142.1| 768|Caenorhabditis elegans Hypothetical
protein F55H12.1 protein.
Length = 768
Score = 35.1 bits (77), Expect = 0.068
Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Frame = +3
Query: 189 SLVSSTLGTPILY*TPQAIRTV*HGTSTSGSAQGPARTKPARRPSSR*TWTTNNSRDQRY 368
++ ST+ T + P +RT +T + P K R PS+ T T S Q
Sbjct: 10 TIAPSTMKTTV---APPTMRTT-MAPTTMKTTVAPPTMKTTRSPSTMKT-TKEPSMTQTT 64
Query: 369 STERSNITSPRKFLEYFSPAIRYLKGGHAS--GFSHVTINEGTEKRLFQ 509
T +S IT+P FL+ A Y+K G A+ + E T+++ F+
Sbjct: 65 KTVQSTITNPVSFLDSEVTAKEYVKDGGAARKAYRDAIQVENTDRQAFR 113
>U64608-4|AAB04595.2| 282|Caenorhabditis elegans Hypothetical
protein T22B7.3 protein.
Length = 282
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = +3
Query: 633 KGVERMKAITVANQIKDQDHNGRADIEVVDSEAHDGIFDRFF---DALGSGNKXAIA 794
+GV R KA+ +Q+K+ N A +EV++S + + D F A+ GNK +A
Sbjct: 39 RGVNREKALKQWDQLKNTIENSGAKVEVMESTGAESLPDIVFAANAAIIKGNKAYLA 95
>Z66567-5|CAA91492.4| 757|Caenorhabditis elegans Hypothetical
protein ZK455.8a protein.
Length = 757
Score = 29.9 bits (64), Expect = 2.6
Identities = 20/92 (21%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Frame = +3
Query: 111 SRMPAGSRVSKYGGLRTSNRSPFRRLSLV-SSTLGTPILY*TPQA-IRTV*HGTSTSGSA 284
+ +P S + S+ P L+ S+ T + + TPQA ++TV G ++ +
Sbjct: 47 THLPIRSETDLISNISASSMMPLENHPLIYSNPEFTTVRFLTPQASVQTVNAGAASVAPS 106
Query: 285 QGPARTKPARRPSSR*TWTTNNSRDQRYSTER 380
+ + +R+PS + R+Q Y ++
Sbjct: 107 EASVNAENSRKPSKARLQSEMEIRNQHYQKQK 138
>AF040654-4|AAN65303.2| 886|Caenorhabditis elegans Trp (transient
receptor potential)channel family protein 2, isoform b
protein.
Length = 886
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = -2
Query: 631 AFSPTKTKI*WSTSKMKQSPLFKDSNVGFTCLTRTFLLPLIWKS 500
+F P+ +K+ WS K+K S L K ++ T L T L L KS
Sbjct: 820 SFMPSSSKLSWSNLKVKASRLSKSKSIDTTHLDVTRLHALSKKS 863
>U42835-6|AAA83589.2| 816|Caenorhabditis elegans Dehydrogenases,
short chain protein27 protein.
Length = 816
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
Frame = +2
Query: 341 DEQFQGSAVQ--HREVQYYESKEVPGI 415
DEQF G +REV+YY +++PG+
Sbjct: 172 DEQFIGGLTMFFNREVEYYAMEKIPGL 198
>L23646-6|AAU87821.1| 469|Caenorhabditis elegans Hypothetical
protein F44E2.7d protein.
Length = 469
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +1
Query: 691 TMEGLISKWSTPKRTMESSTGSSMPSAPATR 783
TM+ L WS KR+ + T S+P++P +R
Sbjct: 63 TMDTLGLIWSESKRSYDRDTSCSLPASPMSR 93
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,453,644
Number of Sequences: 27780
Number of extensions: 415373
Number of successful extensions: 1313
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1310
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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