Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_L06
         (927 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    25   3.3  
AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic acetylch...    23   9.9  

>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 25.0 bits (52), Expect = 3.3
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = -2

Query: 407 RLHPFCYVLWIFFCCSN 357
           R  PFCY LW F    N
Sbjct: 91  RTAPFCYTLWTFDIVKN 107


>AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 8 protein.
          Length = 520

 Score = 23.4 bits (48), Expect = 9.9
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = +3

Query: 273 IKRENVVPSQEKGHILYRRLAVAMHRTIIRTTEKNPKDVAKW 398
           ++ ENV+P Q    +L    AV      I+  +K+ + V  W
Sbjct: 413 VEAENVIPKQLSPEVLSAIQAVRFIAQHIKDADKDNEIVEDW 454


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 582,028
Number of Sequences: 2352
Number of extensions: 8815
Number of successful extensions: 12
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 100882044
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)