Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_L06
(927 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC050434-1|AAH50434.1| 273|Homo sapiens FLJ10154 protein protein. 41 0.006
AL442127-3|CAI13168.1| 273|Homo sapiens RP11-297I6.1 protein. 41 0.006
AL442127-1|CAI13166.1| 142|Homo sapiens RP11-297I6.1 protein. 41 0.006
AK001016-1|BAA91467.1| 273|Homo sapiens protein ( Homo sapiens ... 41 0.006
BC146775-1|AAI46776.1| 1320|Homo sapiens TNRC15 protein protein. 36 0.21
AY176045-1|AAO46889.1| 1299|Homo sapiens Grb10 interacting GYF p... 36 0.21
AK001739-1|BAA91873.1| 1100|Homo sapiens protein ( Homo sapiens ... 36 0.21
AB014542-1|BAA31617.2| 1329|Homo sapiens KIAA0642 protein protein. 36 0.21
BC002366-1|AAH02366.1| 820|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 33 1.9
AF026402-1|AAB87902.1| 820|Homo sapiens U5 snRNP 100 kD protein... 33 1.9
BC007074-1|AAH07074.1| 173|Homo sapiens Unknown (protein for IM... 32 3.4
X84841-1|CAA59278.1| 437|Homo sapiens 68 kDa (U1) ribonucleopro... 31 4.5
X07401-1|CAA30303.1| 285|Homo sapiens hU1-70K protein (286 AA) ... 31 4.5
X06814-1|CAA29963.1| 233|Homo sapiens protein ( Human mRNA for ... 31 4.5
X06812-1|CAA29961.1| 301|Homo sapiens protein ( Human mRNA for ... 31 4.5
X04654-1|CAA28352.1| 614|Homo sapiens protein ( Human mRNA for ... 31 4.5
M57939-2|AAA36573.1| 428|Homo sapiens ribonucleoprotein antigen... 31 4.5
M57939-1|AAA36572.1| 437|Homo sapiens ribonucleoprotein antigen... 31 4.5
M22636-1|AAA03001.1| 437|Homo sapiens protein ( Human U1 small ... 31 4.5
BC001315-1|AAH01315.1| 437|Homo sapiens small nuclear ribonucle... 31 4.5
AL117507-1|CAB55969.1| 341|Homo sapiens hypothetical protein pr... 31 4.5
U82939-1|AAC98530.1| 815|Homo sapiens p53 binding protein protein. 31 5.9
BC060884-1|AAH60884.1| 1045|Homo sapiens topoisomerase I binding... 31 5.9
AL353671-4|CAH71253.1| 980|Homo sapiens topoisomerase I binding... 31 5.9
AL353671-3|CAH71254.1| 1045|Homo sapiens topoisomerase I binding... 31 5.9
AF098300-1|AAD23379.1| 1045|Homo sapiens topoisomerase I-binding... 31 5.9
AB045733-1|BAB03715.1| 980|Homo sapiens RING-finger protein pro... 31 5.9
AB045732-1|BAB03714.1| 1045|Homo sapiens RING-finger protein pro... 31 5.9
AY533563-1|AAS45544.1| 2663|Homo sapiens ankyrin repeat-containi... 31 7.9
AY373756-1|AAR25661.1| 2664|Homo sapiens ankyrin repeat-containi... 31 7.9
AY131227-1|AAN07913.1| 611|Homo sapiens medulloblastoma antigen... 31 7.9
>BC050434-1|AAH50434.1| 273|Homo sapiens FLJ10154 protein protein.
Length = 273
Score = 41.1 bits (92), Expect = 0.006
Identities = 22/50 (44%), Positives = 34/50 (68%)
Frame = +2
Query: 698 IMAENTKKIEEAQRKLAEERLAMIEEQEKWMRNDXS*KRPEKRIKRTKED 847
I+ EN +KI EAQ KLAEE+L ++EEQ K ++ K ++R ++ KE+
Sbjct: 204 ILEENNRKIAEAQAKLAEEQLRIVEEQRK--IHEERMKLEQERQRQQKEE 251
>AL442127-3|CAI13168.1| 273|Homo sapiens RP11-297I6.1 protein.
Length = 273
Score = 41.1 bits (92), Expect = 0.006
Identities = 22/50 (44%), Positives = 34/50 (68%)
Frame = +2
Query: 698 IMAENTKKIEEAQRKLAEERLAMIEEQEKWMRNDXS*KRPEKRIKRTKED 847
I+ EN +KI EAQ KLAEE+L ++EEQ K ++ K ++R ++ KE+
Sbjct: 204 ILEENNRKIAEAQAKLAEEQLRIVEEQRK--IHEERMKLEQERQRQQKEE 251
>AL442127-1|CAI13166.1| 142|Homo sapiens RP11-297I6.1 protein.
Length = 142
Score = 41.1 bits (92), Expect = 0.006
Identities = 22/50 (44%), Positives = 34/50 (68%)
Frame = +2
Query: 698 IMAENTKKIEEAQRKLAEERLAMIEEQEKWMRNDXS*KRPEKRIKRTKED 847
I+ EN +KI EAQ KLAEE+L ++EEQ K ++ K ++R ++ KE+
Sbjct: 73 ILEENNRKIAEAQAKLAEEQLRIVEEQRK--IHEERMKLEQERQRQQKEE 120
>AK001016-1|BAA91467.1| 273|Homo sapiens protein ( Homo sapiens
cDNA FLJ10154 fis, clone HEMBA1003418. ).
Length = 273
Score = 41.1 bits (92), Expect = 0.006
Identities = 22/50 (44%), Positives = 34/50 (68%)
Frame = +2
Query: 698 IMAENTKKIEEAQRKLAEERLAMIEEQEKWMRNDXS*KRPEKRIKRTKED 847
I+ EN +KI EAQ KLAEE+L ++EEQ K ++ K ++R ++ KE+
Sbjct: 204 ILEENNRKIAEAQAKLAEEQLRIVEEQRK--IHEERMKLEQERQRQQKEE 251
>BC146775-1|AAI46776.1| 1320|Homo sapiens TNRC15 protein protein.
Length = 1320
Score = 35.9 bits (79), Expect = 0.21
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +2
Query: 704 AENTKKIEEAQRKLAEERLAMIEEQEKWMRNDXS*KRPEKRIKRTKE 844
A+ ++ EEAQR+L E RL M EE + + KR E ++R KE
Sbjct: 869 AKWAREEEEAQRRLEENRLRMEEEAARLRHEEEERKRKELEVQRQKE 915
>AY176045-1|AAO46889.1| 1299|Homo sapiens Grb10 interacting GYF
protein 2 protein.
Length = 1299
Score = 35.9 bits (79), Expect = 0.21
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +2
Query: 704 AENTKKIEEAQRKLAEERLAMIEEQEKWMRNDXS*KRPEKRIKRTKE 844
A+ ++ EEAQR+L E RL M EE + + KR E ++R KE
Sbjct: 848 AKWAREEEEAQRRLEENRLRMEEEAARLRHEEEERKRKELEVQRQKE 894
>AK001739-1|BAA91873.1| 1100|Homo sapiens protein ( Homo sapiens
cDNA FLJ10877 fis, clone NT2RP4001861. ).
Length = 1100
Score = 35.9 bits (79), Expect = 0.21
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +2
Query: 704 AENTKKIEEAQRKLAEERLAMIEEQEKWMRNDXS*KRPEKRIKRTKE 844
A+ ++ EEAQR+L E RL M EE + + KR E ++R KE
Sbjct: 848 AKWAREEEEAQRRLEENRLRMEEEAARLRHEEEERKRKELEVQRQKE 894
>AB014542-1|BAA31617.2| 1329|Homo sapiens KIAA0642 protein protein.
Length = 1329
Score = 35.9 bits (79), Expect = 0.21
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +2
Query: 704 AENTKKIEEAQRKLAEERLAMIEEQEKWMRNDXS*KRPEKRIKRTKE 844
A+ ++ EEAQR+L E RL M EE + + KR E ++R KE
Sbjct: 878 AKWAREEEEAQRRLEENRLRMEEEAARLRHEEEERKRKELEVQRQKE 924
>BC002366-1|AAH02366.1| 820|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 23 protein.
Length = 820
Score = 32.7 bits (71), Expect = 1.9
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +1
Query: 679 KERTRRHHG*KYQKN*RSTAQAGGREISDDRR--TRKMDEERXKLKKTREADKEDQRRSR 852
K+R R + + RS +++ + +RR R+ D+ER + KK R+ DK+ RR +
Sbjct: 42 KDRKRHRSRDRRRGGSRSRSRSRSKSAERERRHKERERDKERDRNKKDRDRDKDGHRRDK 101
Query: 853 QNIHGQVS 876
+S
Sbjct: 102 DRKRSSLS 109
>AF026402-1|AAB87902.1| 820|Homo sapiens U5 snRNP 100 kD protein
protein.
Length = 820
Score = 32.7 bits (71), Expect = 1.9
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +1
Query: 679 KERTRRHHG*KYQKN*RSTAQAGGREISDDRR--TRKMDEERXKLKKTREADKEDQRRSR 852
K+R R + + RS +++ + +RR R+ D+ER + KK R+ DK+ RR +
Sbjct: 42 KDRKRHRSRDRRRGGSRSRSRSRSKSAERERRHKERERDKERDRNKKDRDRDKDGHRRDK 101
Query: 853 QNIHGQVS 876
+S
Sbjct: 102 DRKRSSLS 109
>BC007074-1|AAH07074.1| 173|Homo sapiens Unknown (protein for
IMAGE:4293359) protein.
Length = 173
Score = 31.9 bits (69), Expect = 3.4
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +2
Query: 713 TKKIEEAQRKLAEERLAMIEEQEKWMRNDXS*KRPEKRIKR 835
T+K E Q KLAEE++ EE+ K D + K+ +K+ K+
Sbjct: 133 TEKERERQAKLAEEKMRKEEEEAKKRAEDDAKKKKKKKKKK 173
>X84841-1|CAA59278.1| 437|Homo sapiens 68 kDa (U1)
ribonucleoprotein protein.
Length = 437
Score = 31.5 bits (68), Expect = 4.5
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 763 DDRRTRKMDEERXKLKKTREADKEDQRRSRQ 855
D R R+ R + +++R DKE++RRSR+
Sbjct: 249 DKERERRRSRSRDRRRRSRSRDKEERRRSRE 279
>X07401-1|CAA30303.1| 285|Homo sapiens hU1-70K protein (286 AA)
protein.
Length = 285
Score = 31.5 bits (68), Expect = 4.5
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 763 DDRRTRKMDEERXKLKKTREADKEDQRRSRQ 855
D R R+ R + +++R DKE++RRSR+
Sbjct: 97 DKERERRRSRSRDRRRRSRSRDKEERRRSRE 127
>X06814-1|CAA29963.1| 233|Homo sapiens protein ( Human mRNA for
hU1-70K small nuclear RNP protein (RNP12). ).
Length = 233
Score = 31.5 bits (68), Expect = 4.5
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 763 DDRRTRKMDEERXKLKKTREADKEDQRRSRQ 855
D R R+ R + +++R DKE++RRSR+
Sbjct: 64 DKERERRRSRSRDRRRRSRSRDKEERRRSRE 94
>X06812-1|CAA29961.1| 301|Homo sapiens protein ( Human mRNA for
hU1-70K snRNP protein (RNP8). ).
Length = 301
Score = 31.5 bits (68), Expect = 4.5
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 763 DDRRTRKMDEERXKLKKTREADKEDQRRSRQ 855
D R R+ R + +++R DKE++RRSR+
Sbjct: 200 DKERERRRSRSRDRRRRSRSRDKEERRRSRE 230
>X04654-1|CAA28352.1| 614|Homo sapiens protein ( Human mRNA for U1
RNA-associated 70K protein. ).
Length = 614
Score = 31.5 bits (68), Expect = 4.5
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 763 DDRRTRKMDEERXKLKKTREADKEDQRRSRQ 855
D R R+ R + +++R DKE++RRSR+
Sbjct: 426 DKERERRRSRSRDRRRRSRSRDKEERRRSRE 456
>M57939-2|AAA36573.1| 428|Homo sapiens ribonucleoprotein antigen
protein.
Length = 428
Score = 31.5 bits (68), Expect = 4.5
Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Frame = +1
Query: 766 DRRTRKMDEERXKLKKTREADKE-DQRRSR 852
D R R D ER + +++RE DKE ++RRSR
Sbjct: 220 DERDRDRDRERERRERSRERDKERERRRSR 249
Score = 31.5 bits (68), Expect = 4.5
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 763 DDRRTRKMDEERXKLKKTREADKEDQRRSRQ 855
D R R+ R + +++R DKE++RRSR+
Sbjct: 240 DKERERRRSRSRDRRRRSRSRDKEERRRSRE 270
>M57939-1|AAA36572.1| 437|Homo sapiens ribonucleoprotein antigen
protein.
Length = 437
Score = 31.5 bits (68), Expect = 4.5
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 763 DDRRTRKMDEERXKLKKTREADKEDQRRSRQ 855
D R R+ R + +++R DKE++RRSR+
Sbjct: 249 DKERERRRSRSRDRRRRSRSRDKEERRRSRE 279
>M22636-1|AAA03001.1| 437|Homo sapiens protein ( Human U1 small
nuclear ribonucleoprotein 70 kd protein mRNA, complete
cds. ).
Length = 437
Score = 31.5 bits (68), Expect = 4.5
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 763 DDRRTRKMDEERXKLKKTREADKEDQRRSRQ 855
D R R+ R + +++R DKE++RRSR+
Sbjct: 249 DKERERRRSRSRDRRRRSRSRDKEERRRSRE 279
>BC001315-1|AAH01315.1| 437|Homo sapiens small nuclear
ribonucleoprotein 70kDa polypeptide (RNP antigen)
protein.
Length = 437
Score = 31.5 bits (68), Expect = 4.5
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 763 DDRRTRKMDEERXKLKKTREADKEDQRRSRQ 855
D R R+ R + +++R DKE++RRSR+
Sbjct: 249 DKERERRRSRSRDRRRRSRSRDKEERRRSRE 279
>AL117507-1|CAB55969.1| 341|Homo sapiens hypothetical protein
protein.
Length = 341
Score = 31.5 bits (68), Expect = 4.5
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 763 DDRRTRKMDEERXKLKKTREADKEDQRRSRQ 855
D R R+ R + +++R DKE++RRSR+
Sbjct: 153 DKERERRRSRSRDRRRRSRSRDKEERRRSRE 183
>U82939-1|AAC98530.1| 815|Homo sapiens p53 binding protein protein.
Length = 815
Score = 31.1 bits (67), Expect = 5.9
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Frame = +1
Query: 691 RRHHG*KYQKN*RSTAQAGGREIS--DDRRTRKMDEERXKLKKTREADKED--QRRSRQN 858
R+HHG K K+ RS ++ R D +R+R D + +T E + RSR +
Sbjct: 386 RKHHGKKRMKSKRSRSRESSRPRGRRDKKRSRTRDSSWSRRSQTLSLSSESTSRSRSRSS 445
Query: 859 IHGQ 870
HG+
Sbjct: 446 DHGK 449
>BC060884-1|AAH60884.1| 1045|Homo sapiens topoisomerase I binding,
arginine/serine-rich protein.
Length = 1045
Score = 31.1 bits (67), Expect = 5.9
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Frame = +1
Query: 691 RRHHG*KYQKN*RSTAQAGGREIS--DDRRTRKMDEERXKLKKTREADKED--QRRSRQN 858
R+HHG K K+ RS ++ R D +R+R D + +T E + RSR +
Sbjct: 616 RKHHGKKRMKSKRSRSRESSRPRGRRDKKRSRTRDSSWSRRSQTLSLSSESTSRSRSRSS 675
Query: 859 IHGQ 870
HG+
Sbjct: 676 DHGK 679
>AL353671-4|CAH71253.1| 980|Homo sapiens topoisomerase I binding,
arginine/serine-rich protein.
Length = 980
Score = 31.1 bits (67), Expect = 5.9
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Frame = +1
Query: 691 RRHHG*KYQKN*RSTAQAGGREIS--DDRRTRKMDEERXKLKKTREADKED--QRRSRQN 858
R+HHG K K+ RS ++ R D +R+R D + +T E + RSR +
Sbjct: 551 RKHHGKKRMKSKRSRSRESSRPRGRRDKKRSRTRDSSWSRRSQTLSLSSESTSRSRSRSS 610
Query: 859 IHGQ 870
HG+
Sbjct: 611 DHGK 614
>AL353671-3|CAH71254.1| 1045|Homo sapiens topoisomerase I binding,
arginine/serine-rich protein.
Length = 1045
Score = 31.1 bits (67), Expect = 5.9
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Frame = +1
Query: 691 RRHHG*KYQKN*RSTAQAGGREIS--DDRRTRKMDEERXKLKKTREADKED--QRRSRQN 858
R+HHG K K+ RS ++ R D +R+R D + +T E + RSR +
Sbjct: 616 RKHHGKKRMKSKRSRSRESSRPRGRRDKKRSRTRDSSWSRRSQTLSLSSESTSRSRSRSS 675
Query: 859 IHGQ 870
HG+
Sbjct: 676 DHGK 679
>AF098300-1|AAD23379.1| 1045|Homo sapiens topoisomerase I-binding RS
protein protein.
Length = 1045
Score = 31.1 bits (67), Expect = 5.9
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Frame = +1
Query: 691 RRHHG*KYQKN*RSTAQAGGREIS--DDRRTRKMDEERXKLKKTREADKED--QRRSRQN 858
R+HHG K K+ RS ++ R D +R+R D + +T E + RSR +
Sbjct: 616 RKHHGKKRMKSKRSRSRESSRPRGRRDKKRSRTRDSSWSRRSQTLSLSSESTSRSRSRSS 675
Query: 859 IHGQ 870
HG+
Sbjct: 676 DHGK 679
>AB045733-1|BAB03715.1| 980|Homo sapiens RING-finger protein
protein.
Length = 980
Score = 31.1 bits (67), Expect = 5.9
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Frame = +1
Query: 691 RRHHG*KYQKN*RSTAQAGGREIS--DDRRTRKMDEERXKLKKTREADKED--QRRSRQN 858
R+HHG K K+ RS ++ R D +R+R D + +T E + RSR +
Sbjct: 551 RKHHGKKRMKSKRSRSRESSRPRGRRDKKRSRTRDSSWSRRSQTLSLSSESTSRSRSRSS 610
Query: 859 IHGQ 870
HG+
Sbjct: 611 DHGK 614
>AB045732-1|BAB03714.1| 1045|Homo sapiens RING-finger protein
protein.
Length = 1045
Score = 31.1 bits (67), Expect = 5.9
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Frame = +1
Query: 691 RRHHG*KYQKN*RSTAQAGGREIS--DDRRTRKMDEERXKLKKTREADKED--QRRSRQN 858
R+HHG K K+ RS ++ R D +R+R D + +T E + RSR +
Sbjct: 616 RKHHGKKRMKSKRSRSRESSRPRGRRDKKRSRTRDSSWSRRSQTLSLSSESTSRSRSRSS 675
Query: 859 IHGQ 870
HG+
Sbjct: 676 DHGK 679
>AY533563-1|AAS45544.1| 2663|Homo sapiens ankyrin repeat-containing
cofactor-1 protein.
Length = 2663
Score = 30.7 bits (66), Expect = 7.9
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Frame = +2
Query: 695 DIMAENTKKIEEAQRK--LAEERLAMIEEQEK-WMRNDXS*KRPEKRIKRTKEDLGRTF 862
D+ EN K+ + R EE+L+ ++ +EK W+ D ++ KRIK T +D+ R+F
Sbjct: 677 DLSTENKLKVLKHDRDHFKKEEKLSKMKLEEKEWLFKD---EKSLKRIKDTNKDISRSF 732
>AY373756-1|AAR25661.1| 2664|Homo sapiens ankyrin repeat-containing
protein protein.
Length = 2664
Score = 30.7 bits (66), Expect = 7.9
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Frame = +2
Query: 695 DIMAENTKKIEEAQRK--LAEERLAMIEEQEK-WMRNDXS*KRPEKRIKRTKEDLGRTF 862
D+ EN K+ + R EE+L+ ++ +EK W+ D ++ KRIK T +D+ R+F
Sbjct: 678 DLSTENKLKVLKHDRDHFKKEEKLSKMKLEEKEWLFKD---EKSLKRIKDTNKDISRSF 733
>AY131227-1|AAN07913.1| 611|Homo sapiens medulloblastoma antigen
MU-MB-20.240 protein.
Length = 611
Score = 30.7 bits (66), Expect = 7.9
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Frame = +2
Query: 695 DIMAENTKKIEEAQRK--LAEERLAMIEEQEK-WMRNDXS*KRPEKRIKRTKEDLGRTF 862
D+ EN K+ + R EE+L+ ++ +EK W+ D ++ KRIK T +D+ R+F
Sbjct: 296 DLSTENKLKVLKHDRDHFKKEEKLSKMKLEEKEWLFKD---EKSLKRIKDTNKDISRSF 351
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,905,537
Number of Sequences: 237096
Number of extensions: 1189662
Number of successful extensions: 3998
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 3455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3935
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12103451996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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