Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_L06
(927 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016427-8|AAB65355.1| 513|Caenorhabditis elegans Hypothetical ... 34 0.17
Z81568-2|CAB04590.1| 276|Caenorhabditis elegans Hypothetical pr... 30 2.0
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 30 2.0
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 30 2.0
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical pr... 29 3.6
U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin pro... 29 3.6
M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger pro... 29 3.6
Z75550-3|CAA99929.1| 167|Caenorhabditis elegans Hypothetical pr... 29 4.7
U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical pr... 29 4.7
L23646-1|AAA28041.1| 244|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z81546-7|CAB04452.1| 320|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z81115-5|CAB03295.1| 482|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical p... 29 6.2
X59589-1|CAA42159.1| 395|Caenorhabditis elegans calreticulin pr... 29 6.2
U88308-4|AAB42323.1| 299|Caenorhabditis elegans Hypothetical pr... 29 6.2
U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction... 29 6.2
U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction... 29 6.2
U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction... 29 6.2
U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction... 29 6.2
AF164431-1|AAF82633.1| 320|Caenorhabditis elegans NUD-1 protein. 29 6.2
AF125963-7|AAD14746.1| 395|Caenorhabditis elegans Calreticulin ... 29 6.2
AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein. 29 6.2
AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical ... 29 6.2
Z81586-9|CAB04699.2| 676|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z78012-6|CAB01416.1| 480|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical p... 28 8.2
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p... 28 8.2
Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical p... 28 8.2
U88172-2|AAB42262.1| 368|Caenorhabditis elegans Hypothetical pr... 28 8.2
AY557405-1|AAS64750.1| 480|Caenorhabditis elegans cyclin L prot... 28 8.2
AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine... 28 8.2
>AF016427-8|AAB65355.1| 513|Caenorhabditis elegans Hypothetical
protein F32D1.9 protein.
Length = 513
Score = 33.9 bits (74), Expect = 0.17
Identities = 18/59 (30%), Positives = 34/59 (57%)
Frame = +1
Query: 679 KERTRRHHG*KYQKN*RSTAQAGGREISDDRRTRKMDEERXKLKKTREADKEDQRRSRQ 855
++R R G + + + S+ + R S DRR ++ D ER K ++ R D++ ++RSR+
Sbjct: 414 RDRETRRRG-ERESDRTSSRRHRSRSASGDRRRKRDDREREKRRERRGDDEDRKKRSRR 471
>Z81568-2|CAB04590.1| 276|Caenorhabditis elegans Hypothetical
protein K08E3.2 protein.
Length = 276
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/48 (22%), Positives = 26/48 (54%)
Frame = +1
Query: 754 EISDDRRTRKMDEERXKLKKTREADKEDQRRSRQNIHGQVSLXEPSLI 897
E D+++ K D+E+ + ++ +K+D ++ + +S+ P LI
Sbjct: 130 ERKDEKKDEKKDDEKDERNDEKKEEKKDDQKDDKKAKSMISVDAPELI 177
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/35 (31%), Positives = 24/35 (68%)
Frame = +1
Query: 751 REISDDRRTRKMDEERXKLKKTREADKEDQRRSRQ 855
R+ +++RR R+ +EE + ++ EA+K+ +R R+
Sbjct: 469 RQQAEERRRREREEEERRKREEEEAEKQRKREERE 503
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/35 (31%), Positives = 24/35 (68%)
Frame = +1
Query: 751 REISDDRRTRKMDEERXKLKKTREADKEDQRRSRQ 855
R+ +++RR R+ +EE + ++ EA+K+ +R R+
Sbjct: 469 RQQAEERRRREREEEERRKREEEEAEKQRKREERE 503
>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical
protein F36F2.3a protein.
Length = 1128
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +1
Query: 679 KERTRR---HHG*KYQKN*RSTAQAGGREISDDRRTRKMDEERXKLKKTREADKEDQRRS 849
K+RTRR H ++ S++ + SD+ R+ E+ KK R +KE RR+
Sbjct: 487 KDRTRRKDRHDSRSRRRRDSSSSSSMSSSSSDEDERRRKRREKESSKKRRSVEKERPRRA 546
Query: 850 RQN 858
++
Sbjct: 547 DEH 549
>Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical
protein F33A8.1 protein.
Length = 897
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +1
Query: 670 DS*KERTRRHHG*KYQKN*RSTAQAGGREISD-DRRTRKMDEERXKL-KKTREADKEDQR 843
D K+R R+ + +K +G R D DRR R D+E + ++ R D+ED+R
Sbjct: 801 DRSKDRRRQDSDDEDRKGRERREDSGERRRGDRDRRDRNKDQEDHREDRRDRSKDREDRR 860
Query: 844 RSRQN 858
R++
Sbjct: 861 DRRRH 865
>Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical
protein C25D7.3 protein.
Length = 2150
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 766 DRRTRKMDEERXKLKKTREADKEDQRRSRQNI-HGQVSL 879
++R ++ E R + +E ++EDQRR I HGQ SL
Sbjct: 871 EKREKEWHEMRAAQRAQKEKEEEDQRRMDMGIEHGQESL 909
>U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin
protein.
Length = 897
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +1
Query: 670 DS*KERTRRHHG*KYQKN*RSTAQAGGREISD-DRRTRKMDEERXKL-KKTREADKEDQR 843
D K+R R+ + +K +G R D DRR R D+E + ++ R D+ED+R
Sbjct: 801 DRSKDRRRQDSDDEDRKGRERREDSGERRRGDRDRRDRNKDQEDHREDRRDRSKDREDRR 860
Query: 844 RSRQN 858
R++
Sbjct: 861 DRRRH 865
>M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger
protein protein.
Length = 2150
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 766 DRRTRKMDEERXKLKKTREADKEDQRRSRQNI-HGQVSL 879
++R ++ E R + +E ++EDQRR I HGQ SL
Sbjct: 871 EKREKEWHEMRAAQRAQKEKEEEDQRRMDMGIEHGQESL 909
>Z75550-3|CAA99929.1| 167|Caenorhabditis elegans Hypothetical
protein T22C1.5 protein.
Length = 167
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +2
Query: 716 KKIEEAQRKLAEERLAMIEEQEKWMRNDXS*KRPEKRIKRTKEDLGRTFTAKCR 877
KK+ E R++ EE E EK + + P + +++TK D R TA+ +
Sbjct: 83 KKLLEKLRRMDEETAEQDAEDEKENDENKEPESPNRTLRKTKVDTPRPKTAQLK 136
>U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical
protein T23B3.5 protein.
Length = 211
Score = 29.1 bits (62), Expect = 4.7
Identities = 11/56 (19%), Positives = 31/56 (55%)
Frame = +1
Query: 679 KERTRRHHG*KYQKN*RSTAQAGGREISDDRRTRKMDEERXKLKKTREADKEDQRR 846
++++ + G K ++ + + G + DD++ K DE++ KK + K+++++
Sbjct: 76 EKKSEKKDGDKKEEEKKDEEKKDGDKKEDDKKDEKKDEDKKDEKKDADEKKDEEKK 131
>L23646-1|AAA28041.1| 244|Caenorhabditis elegans Hypothetical
protein F44E2.3 protein.
Length = 244
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/40 (30%), Positives = 26/40 (65%)
Frame = +2
Query: 725 EEAQRKLAEERLAMIEEQEKWMRNDXS*KRPEKRIKRTKE 844
EE+++K E+RLAM+E++ + R+ R + +K+ ++
Sbjct: 185 EESRKKFEEDRLAMLEQKSQLERDRAELARQKSDMKKNEQ 224
>Z81546-7|CAB04452.1| 320|Caenorhabditis elegans Hypothetical
protein F53A2.4 protein.
Length = 320
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 707 ENTKKIEEAQRKLAEERLAMIEEQEKWMRN 796
E K+ EE +RKLAE R A ++E+ RN
Sbjct: 69 EAKKRKEEQERKLAERRAAQKAKEEEEFRN 98
>Z81115-5|CAB03295.1| 482|Caenorhabditis elegans Hypothetical
protein T05D4.5 protein.
Length = 482
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 763 DDRRTRKMDEERXKLKKTREADKEDQRRSRQ 855
D+RRT++ +EE K K E K+D ++
Sbjct: 395 DERRTKRKEEEEKKKKDAEEKKKKDAEEKKK 425
>Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical protein
C35C5.1 protein.
Length = 2962
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 751 REISDDRRTRKMDEERXKLKKTREADKEDQRRSRQN 858
RE +R R+ +EER +L++ REA+K ++N
Sbjct: 1207 REREQERLKREEEEERKRLEQLREAEKLKAEIEKEN 1242
>Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical
protein C35C5.1 protein.
Length = 2962
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 751 REISDDRRTRKMDEERXKLKKTREADKEDQRRSRQN 858
RE +R R+ +EER +L++ REA+K ++N
Sbjct: 1207 REREQERLKREEEEERKRLEQLREAEKLKAEIEKEN 1242
>X59589-1|CAA42159.1| 395|Caenorhabditis elegans calreticulin
protein.
Length = 395
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 766 DRRTRKMDEE-RXKLKKTREADKEDQRRSRQNIHGQVSL 879
D TRK +EE R K ++ +EA K+D ++ G L
Sbjct: 357 DEETRKAEEEARKKAEEEKEAKKDDDEEEKEEEEGHDEL 395
>U88308-4|AAB42323.1| 299|Caenorhabditis elegans Hypothetical
protein C32E8.5 protein.
Length = 299
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +1
Query: 748 GREISDDRRTRKMDEERXKLKKTREADKEDQRRSRQN 858
GR+ DRR R ER + ++R D++ +R +R++
Sbjct: 2 GRDSPRDRRHRDRSPERRRRSRSRSRDRQTRRDTRRD 38
>U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction
molecule protein1, isoform b protein.
Length = 944
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +2
Query: 767 IEEQEKWMRNDXS*KRPEKRIKRTKEDLGRTFTAK 871
IEEQE+ +R D + ++ E++ +R +ED R A+
Sbjct: 264 IEEQERRIREDQARRQQEEQDRRDREDNARRILAQ 298
>U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction
molecule protein1, isoform c protein.
Length = 1148
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +2
Query: 767 IEEQEKWMRNDXS*KRPEKRIKRTKEDLGRTFTAK 871
IEEQE+ +R D + ++ E++ +R +ED R A+
Sbjct: 264 IEEQERRIREDQARRQQEEQDRRDREDNARRILAQ 298
>U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction
molecule protein1, isoform d protein.
Length = 1439
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +2
Query: 767 IEEQEKWMRNDXS*KRPEKRIKRTKEDLGRTFTAK 871
IEEQE+ +R D + ++ E++ +R +ED R A+
Sbjct: 264 IEEQERRIREDQARRQQEEQDRRDREDNARRILAQ 298
>U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction
molecule protein1, isoform a protein.
Length = 1480
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +2
Query: 767 IEEQEKWMRNDXS*KRPEKRIKRTKEDLGRTFTAK 871
IEEQE+ +R D + ++ E++ +R +ED R A+
Sbjct: 264 IEEQERRIREDQARRQQEEQDRRDREDNARRILAQ 298
>AF164431-1|AAF82633.1| 320|Caenorhabditis elegans NUD-1 protein.
Length = 320
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 707 ENTKKIEEAQRKLAEERLAMIEEQEKWMRN 796
E K+ EE +RKLAE R A ++E+ RN
Sbjct: 69 EAKKRKEEQERKLAERRAAQKAKEEEEFRN 98
>AF125963-7|AAD14746.1| 395|Caenorhabditis elegans Calreticulin
protein 1 protein.
Length = 395
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 766 DRRTRKMDEE-RXKLKKTREADKEDQRRSRQNIHGQVSL 879
D TRK +EE R K ++ +EA K+D ++ G L
Sbjct: 357 DEETRKAEEEARKKAEEEKEAKKDDDEEEKEEEEGHDEL 395
>AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein.
Length = 2962
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 751 REISDDRRTRKMDEERXKLKKTREADKEDQRRSRQN 858
RE +R R+ +EER +L++ REA+K ++N
Sbjct: 1207 REREQERLKREEEEERKRLEQLREAEKLKAEIEKEN 1242
>AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical
protein E03H12.5 protein.
Length = 210
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/55 (20%), Positives = 30/55 (54%)
Frame = +1
Query: 682 ERTRRHHG*KYQKN*RSTAQAGGREISDDRRTRKMDEERXKLKKTREADKEDQRR 846
+++ + G K ++ + + G + DD++ K DE++ KK + K+++++
Sbjct: 77 KKSEKKDGDKKEEEKKDEEKKDGDKKEDDKKDEKKDEDKKDEKKDADEKKDEEKK 131
>Z81586-9|CAB04699.2| 676|Caenorhabditis elegans Hypothetical
protein T05F1.11 protein.
Length = 676
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +2
Query: 707 ENTKKIEEAQRKLAEERLAMIEEQEKWMRNDXS*KRPEKRIKRTKED 847
E +++EE +RK EER EE EK + + S +R+++ KE+
Sbjct: 428 EEEERLEEIRRKKEEERKKKEEEDEKRRKAEES-----ERVRKLKEE 469
>Z78012-6|CAB01416.1| 480|Caenorhabditis elegans Hypothetical
protein C52E4.6a protein.
Length = 480
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = +1
Query: 751 REISDDRRTRKMDEERXKLKKT--READKEDQRRSR 852
R+ DR R+ DE++ + K+T R D++D+ R+R
Sbjct: 427 RDRDKDRGDRRKDEKKDRRKRTRSRSRDRKDKNRNR 462
>Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical
protein R11A8.7b protein.
Length = 2584
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = +1
Query: 736 AQAGGREISDDRRTRKMDEERXK--LKKTREADKEDQRRSRQNIHGQVSLXEP 888
AQA E++ + +DEE+ + +KK ++ DK+ +++ + I Q + EP
Sbjct: 1585 AQAESAELAAQKLLELIDEEKVQKEVKKQKQKDKKIKKKEEKKIKKQEAEPEP 1637
>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
protein R11A8.7a protein.
Length = 2606
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = +1
Query: 736 AQAGGREISDDRRTRKMDEERXK--LKKTREADKEDQRRSRQNIHGQVSLXEP 888
AQA E++ + +DEE+ + +KK ++ DK+ +++ + I Q + EP
Sbjct: 1585 AQAESAELAAQKLLELIDEEKVQKEVKKQKQKDKKIKKKEEKKIKKQEAEPEP 1637
>Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical
protein R11A8.7d protein.
Length = 1427
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = +1
Query: 736 AQAGGREISDDRRTRKMDEERXK--LKKTREADKEDQRRSRQNIHGQVSLXEP 888
AQA E++ + +DEE+ + +KK ++ DK+ +++ + I Q + EP
Sbjct: 406 AQAESAELAAQKLLELIDEEKVQKEVKKQKQKDKKIKKKEEKKIKKQEAEPEP 458
>Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical
protein R11A8.7c protein.
Length = 1405
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = +1
Query: 736 AQAGGREISDDRRTRKMDEERXK--LKKTREADKEDQRRSRQNIHGQVSLXEP 888
AQA E++ + +DEE+ + +KK ++ DK+ +++ + I Q + EP
Sbjct: 406 AQAESAELAAQKLLELIDEEKVQKEVKKQKQKDKKIKKKEEKKIKKQEAEPEP 458
>Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical protein
R11A8.7b protein.
Length = 2584
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = +1
Query: 736 AQAGGREISDDRRTRKMDEERXK--LKKTREADKEDQRRSRQNIHGQVSLXEP 888
AQA E++ + +DEE+ + +KK ++ DK+ +++ + I Q + EP
Sbjct: 1585 AQAESAELAAQKLLELIDEEKVQKEVKKQKQKDKKIKKKEEKKIKKQEAEPEP 1637
>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein
R11A8.7a protein.
Length = 2606
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = +1
Query: 736 AQAGGREISDDRRTRKMDEERXK--LKKTREADKEDQRRSRQNIHGQVSLXEP 888
AQA E++ + +DEE+ + +KK ++ DK+ +++ + I Q + EP
Sbjct: 1585 AQAESAELAAQKLLELIDEEKVQKEVKKQKQKDKKIKKKEEKKIKKQEAEPEP 1637
>Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical
protein T04A8.13 protein.
Length = 791
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 769 RRTRKMDEERXKLKKTREADKEDQRRSR 852
+R RK+ +E +LKK E DKE+ + +
Sbjct: 48 KRERKLQDEFAELKKDEEKDKEEAEKEK 75
>U88172-2|AAB42262.1| 368|Caenorhabditis elegans Hypothetical
protein ZK354.6 protein.
Length = 368
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +1
Query: 754 EISDDRRTRKMDEERXKLKKTREADK--EDQRRSRQNIHGQV 873
E + +K DE + K +K E K ED+++ +QNI G V
Sbjct: 8 EEKKETEEKKDDESKKKDEKKEEKSKRKEDEKKEKQNIAGAV 49
>AY557405-1|AAS64750.1| 480|Caenorhabditis elegans cyclin L
protein.
Length = 480
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = +1
Query: 751 REISDDRRTRKMDEERXKLKKT--READKEDQRRSR 852
R+ DR R+ DE++ + K+T R D++D+ R+R
Sbjct: 427 RDRDKDRGDRRKDEKKDRRKRTRSRSRDRKDKNRNR 462
>AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine
receptor protein 6 protein.
Length = 562
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/37 (29%), Positives = 23/37 (62%)
Frame = +1
Query: 754 EISDDRRTRKMDEERXKLKKTREADKEDQRRSRQNIH 864
+++DD R ++ +E + K + D+E R++ +NIH
Sbjct: 463 DMTDDIRGKETEEISPETTKDTDPDREKLRKAEKNIH 499
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,918,639
Number of Sequences: 27780
Number of extensions: 205345
Number of successful extensions: 1123
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1096
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2381234086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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