Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_L01
(940 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 35 0.097
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 35 0.097
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 35 0.097
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 35 0.097
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 35 0.097
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 35 0.097
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 35 0.097
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.29
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.29
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.29
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.39
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.39
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 32 0.51
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 32 0.68
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 31 0.90
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 31 0.90
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 31 1.2
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 31 1.2
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 31 1.6
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 31 1.6
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 31 1.6
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 31 1.6
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 31 1.6
Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical pr... 30 2.1
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 30 2.1
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 30 2.1
AF036699-5|AAB88359.1| 290|Caenorhabditis elegans Collagen prot... 30 2.1
Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical pr... 30 2.7
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 30 2.7
AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen stru... 30 2.7
AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen stru... 30 2.7
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 30 2.7
AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen prot... 30 2.7
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 29 3.6
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 3.6
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 3.6
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 3.6
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 29 3.6
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 29 4.8
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 4.8
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 29 4.8
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 29 4.8
Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 29 6.3
X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein. 29 6.3
U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter... 29 6.3
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 28 8.4
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 28 8.4
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 28 8.4
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 28 8.4
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 28 8.4
AC006790-10|AAF60736.1| 371|Caenorhabditis elegans Collagen pro... 28 8.4
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 34.7 bits (76), Expect = 0.097
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +3
Query: 801 PPPPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSPXXP 929
PP P P P P G PG P P + PSG P P
Sbjct: 145 PPCQPCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGP 187
Score = 32.3 bits (70), Expect = 0.51
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +3
Query: 801 PPPPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSP 920
PP P P P P G PG P P + PP P
Sbjct: 154 PPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGP 193
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 34.7 bits (76), Expect = 0.097
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +3
Query: 801 PPPPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSPXXP 929
PP P P P P G PG P P + PSG P P
Sbjct: 145 PPCQPCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGP 187
Score = 32.3 bits (70), Expect = 0.51
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +3
Query: 801 PPPPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSP 920
PP P P P P G PG P P + PP P
Sbjct: 154 PPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGP 193
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 34.7 bits (76), Expect = 0.097
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = +3
Query: 801 PPPPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSP 920
PPPP LP P P G PP P PP G P
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPP 753
Score = 34.7 bits (76), Expect = 0.097
Identities = 18/45 (40%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Frame = +3
Query: 801 PPPPP--LPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSPXXP 929
PPPPP LP P P G PP P PP G P P
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Score = 30.3 bits (65), Expect = 2.1
Identities = 18/48 (37%), Positives = 19/48 (39%), Gaps = 5/48 (10%)
Frame = +3
Query: 801 PPP--PPLPXKXXXPXXPXGKP---GXPPKXKXPXXSSPPSGXSPXXP 929
PPP PP+ P P G P G PP P P SG P P
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 762
Score = 29.9 bits (64), Expect = 2.7
Identities = 20/72 (27%), Positives = 20/72 (27%)
Frame = +1
Query: 655 PPXXPPPQXPPPKXWXXXXKXGAXPGXXXKXXXGXSPPGGXPXGGTXXXXXXXXXXXKXX 834
PP PPP PP PG G PP P G K
Sbjct: 726 PPPPPPPGGLPP--ITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Query: 835 PPXPPXXNRVGP 870
PP PP P
Sbjct: 784 PPPPPPPGMFAP 795
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/46 (36%), Positives = 17/46 (36%), Gaps = 3/46 (6%)
Frame = +3
Query: 801 PPPPP--LPXKXXXPXXPXGKP-GXPPKXKXPXXSSPPSGXSPXXP 929
PPPPP LP P P P G PP P G P P
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 34.7 bits (76), Expect = 0.097
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = +3
Query: 801 PPPPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSP 920
PPPP LP P P G PP P PP G P
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPP 753
Score = 34.7 bits (76), Expect = 0.097
Identities = 18/45 (40%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Frame = +3
Query: 801 PPPPP--LPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSPXXP 929
PPPPP LP P P G PP P PP G P P
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Score = 30.3 bits (65), Expect = 2.1
Identities = 18/48 (37%), Positives = 19/48 (39%), Gaps = 5/48 (10%)
Frame = +3
Query: 801 PPP--PPLPXKXXXPXXPXGKP---GXPPKXKXPXXSSPPSGXSPXXP 929
PPP PP+ P P G P G PP P P SG P P
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 762
Score = 29.9 bits (64), Expect = 2.7
Identities = 20/72 (27%), Positives = 20/72 (27%)
Frame = +1
Query: 655 PPXXPPPQXPPPKXWXXXXKXGAXPGXXXKXXXGXSPPGGXPXGGTXXXXXXXXXXXKXX 834
PP PPP PP PG G PP P G K
Sbjct: 726 PPPPPPPGGLPP--ITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Query: 835 PPXPPXXNRVGP 870
PP PP P
Sbjct: 784 PPPPPPPGMFAP 795
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/46 (36%), Positives = 17/46 (36%), Gaps = 3/46 (6%)
Frame = +3
Query: 801 PPPPP--LPXKXXXPXXPXGKP-GXPPKXKXPXXSSPPSGXSPXXP 929
PPPPP LP P P P G PP P G P P
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 34.7 bits (76), Expect = 0.097
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +3
Query: 801 PPPPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSPXXP 929
PP P P P P G PG P P + PSG P P
Sbjct: 145 PPCQPCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGP 187
Score = 32.3 bits (70), Expect = 0.51
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +3
Query: 801 PPPPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSP 920
PP P P P P G PG P P + PP P
Sbjct: 154 PPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGP 193
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 34.7 bits (76), Expect = 0.097
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +3
Query: 801 PPPPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSPXXP 929
PP P P P P G PG P P + PSG P P
Sbjct: 145 PPCQPCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGP 187
Score = 32.3 bits (70), Expect = 0.51
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +3
Query: 801 PPPPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSP 920
PP P P P P G PG P P + PP P
Sbjct: 154 PPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGP 193
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 34.7 bits (76), Expect = 0.097
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = +3
Query: 801 PPPPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSP 920
PPPP LP P P G PP P PP G P
Sbjct: 297 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPP 336
Score = 34.7 bits (76), Expect = 0.097
Identities = 18/45 (40%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Frame = +3
Query: 801 PPPPP--LPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSPXXP 929
PPPPP LP P P G PP P PP G P P
Sbjct: 311 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 355
Score = 30.3 bits (65), Expect = 2.1
Identities = 18/48 (37%), Positives = 19/48 (39%), Gaps = 5/48 (10%)
Frame = +3
Query: 801 PPP--PPLPXKXXXPXXPXGKP---GXPPKXKXPXXSSPPSGXSPXXP 929
PPP PP+ P P G P G PP P P SG P P
Sbjct: 298 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 345
Score = 29.9 bits (64), Expect = 2.7
Identities = 20/72 (27%), Positives = 20/72 (27%)
Frame = +1
Query: 655 PPXXPPPQXPPPKXWXXXXKXGAXPGXXXKXXXGXSPPGGXPXGGTXXXXXXXXXXXKXX 834
PP PPP PP PG G PP P G K
Sbjct: 309 PPPPPPPGGLPP--ITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 366
Query: 835 PPXPPXXNRVGP 870
PP PP P
Sbjct: 367 PPPPPPPGMFAP 378
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/46 (36%), Positives = 17/46 (36%), Gaps = 3/46 (6%)
Frame = +3
Query: 801 PPPPP--LPXKXXXPXXPXGKP-GXPPKXKXPXXSSPPSGXSPXXP 929
PPPPP LP P P P G PP P G P P
Sbjct: 327 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 372
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.1 bits (72), Expect = 0.29
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = +3
Query: 807 PPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSPXXPK 932
PPP P P G P PP P PP+G SP P+
Sbjct: 255 PPPPPAAGSPPPPRTGSPPPPPTGSPPP---PPAGGSPPPPR 293
Score = 32.7 bits (71), Expect = 0.39
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = +3
Query: 804 PPPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSPXXP 929
PPPP P K P G P PP P PP SP P
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPPPPAAGSP---PPPRTGSPPPP 275
Score = 32.3 bits (70), Expect = 0.51
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Frame = +3
Query: 801 PPPPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPP--SGXSP 920
PPPPP P P PP+ P S PP +G SP
Sbjct: 280 PPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSP 321
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/44 (36%), Positives = 17/44 (38%), Gaps = 4/44 (9%)
Frame = +3
Query: 801 PPP----PPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSP 920
PPP PP P P P G PP+ P PP G P
Sbjct: 265 PPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPP 308
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/47 (38%), Positives = 18/47 (38%), Gaps = 4/47 (8%)
Frame = +3
Query: 801 PPP----PPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSPXXP 929
PPP PP P P P G P PP P PP SP P
Sbjct: 257 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP---PPPRAGSPPPP 300
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.1 bits (72), Expect = 0.29
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = +3
Query: 807 PPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSPXXPK 932
PPP P P G P PP P PP+G SP P+
Sbjct: 276 PPPPPAAGSPPPPRTGSPPPPPTGSPPP---PPAGGSPPPPR 314
Score = 32.7 bits (71), Expect = 0.39
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = +3
Query: 804 PPPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSPXXP 929
PPPP P K P G P PP P PP SP P
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPPPPAAGSP---PPPRTGSPPPP 296
Score = 32.3 bits (70), Expect = 0.51
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Frame = +3
Query: 801 PPPPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPP--SGXSP 920
PPPPP P P PP+ P S PP +G SP
Sbjct: 301 PPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSP 342
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/44 (36%), Positives = 17/44 (38%), Gaps = 4/44 (9%)
Frame = +3
Query: 801 PPP----PPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSP 920
PPP PP P P P G PP+ P PP G P
Sbjct: 286 PPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPP 329
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/47 (38%), Positives = 18/47 (38%), Gaps = 4/47 (8%)
Frame = +3
Query: 801 PPP----PPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSPXXP 929
PPP PP P P P G P PP P PP SP P
Sbjct: 278 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP---PPPRAGSPPPP 321
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.1 bits (72), Expect = 0.29
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = +3
Query: 807 PPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSPXXPK 932
PPP P P G P PP P PP+G SP P+
Sbjct: 261 PPPPPAAGSPPPPRTGSPPPPPTGSPPP---PPAGGSPPPPR 299
Score = 32.7 bits (71), Expect = 0.39
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = +3
Query: 804 PPPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSPXXP 929
PPPP P K P G P PP P PP SP P
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPPPPAAGSP---PPPRTGSPPPP 281
Score = 32.3 bits (70), Expect = 0.51
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Frame = +3
Query: 801 PPPPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPP--SGXSP 920
PPPPP P P PP+ P S PP +G SP
Sbjct: 286 PPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSP 327
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/44 (36%), Positives = 17/44 (38%), Gaps = 4/44 (9%)
Frame = +3
Query: 801 PPP----PPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSP 920
PPP PP P P P G PP+ P PP G P
Sbjct: 271 PPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPP 314
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/47 (38%), Positives = 18/47 (38%), Gaps = 4/47 (8%)
Frame = +3
Query: 801 PPP----PPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSPXXP 929
PPP PP P P P G P PP P PP SP P
Sbjct: 263 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP---PPPRAGSPPPP 306
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.7 bits (71), Expect = 0.39
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +3
Query: 801 PPPPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSPXXP 929
PPPPP P + P G PG PP P G P P
Sbjct: 298 PPPPPPPGR---TPGPPGMPGMPPPPPPSRFGPPGMGGMPPPP 337
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/34 (35%), Positives = 14/34 (41%)
Frame = +3
Query: 804 PPPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPP 905
PPPP P + P P PP + P PP
Sbjct: 317 PPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPP 350
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.7 bits (71), Expect = 0.39
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +3
Query: 801 PPPPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSPXXP 929
PPPPP P + P G PG PP P G P P
Sbjct: 308 PPPPPPPGR---TPGPPGMPGMPPPPPPSRFGPPGMGGMPPPP 347
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/34 (35%), Positives = 14/34 (41%)
Frame = +3
Query: 804 PPPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPP 905
PPPP P + P P PP + P PP
Sbjct: 327 PPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPP 360
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 32.3 bits (70), Expect = 0.51
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +3
Query: 801 PPPPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSP 920
PP PP P P P G+ G P P PP P
Sbjct: 159 PPGPPGPDGPAGPAGPDGEAGSPAAPSPPGPPGPPGPAGP 198
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 31.9 bits (69), Expect = 0.68
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +3
Query: 801 PPPPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSG 911
PPPPP P P P PP P PP G
Sbjct: 561 PPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPPPPG 597
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 31.5 bits (68), Expect = 0.90
Identities = 14/40 (35%), Positives = 16/40 (40%)
Frame = +3
Query: 801 PPPPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSP 920
PPPPP + P G+P PP P PP P
Sbjct: 680 PPPPPQGQQYYGGPPPPGQPYGPPGGYPPQQQRPPYQAQP 719
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 31.5 bits (68), Expect = 0.90
Identities = 14/40 (35%), Positives = 16/40 (40%)
Frame = +3
Query: 801 PPPPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSP 920
PPPPP + P G+P PP P PP P
Sbjct: 680 PPPPPQGQQYYGGPPPPGQPYGPPGGYPPQQQRPPYQAQP 719
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = +3
Query: 801 PPPPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSPXXPKXN 938
PP PP P P P G+ G P P PP P P N
Sbjct: 158 PPGPPGPDGPAGPAGPDGEAGSPAAPSPP---GPPGPSGPAGPAGN 200
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = +3
Query: 801 PPPPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSPXXP 929
PP P P P P G PG P + PSG P P
Sbjct: 160 PPCQPCPAGPPGPPGPDGTPGEPGGPGPAGSPAGPSGPGPAGP 202
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = +3
Query: 801 PPPPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSPXXP 929
PPPPP P K P P + P SPP P P
Sbjct: 122 PPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTP 164
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = +3
Query: 801 PPPPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPP 905
PP PP P P P G PG P K P + PP
Sbjct: 223 PPGPPGPP---GPPGPQGPPGPPGKDGQPGKAGPP 254
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +3
Query: 801 PPPPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPP 905
PP PP P P P GK G P K P P
Sbjct: 226 PPGPPGPPGPQGPPGPPGKDGQPGKAGPPGLPGDP 260
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -1
Query: 871 GGXPGXPXGXXGXXXFXGRGGGGG 800
GG PG P G G G GGGGG
Sbjct: 615 GGGPGGPGGGGGPPRGPGGGGGGG 638
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +3
Query: 804 PPPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSP 920
PPPPLP P KP PP P PP SP
Sbjct: 76 PPPPLPLSN-----PPAKPTPPPPPPKPTIRPPPIPASP 109
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +3
Query: 804 PPPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSP 920
PPPPLP P KP PP P PP SP
Sbjct: 298 PPPPLPLSN-----PPAKPTPPPPPPKPTIRPPPIPASP 331
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -1
Query: 871 GGXPGXPXGXXGXXXFXGRGGGGG 800
GG PG P G G G GGGGG
Sbjct: 615 GGGPGGPGGGGGPPRGPGGGGGGG 638
>Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical
protein C15A11.1 protein.
Length = 303
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/43 (32%), Positives = 15/43 (34%)
Frame = +3
Query: 801 PPPPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSPXXP 929
PP PP P P P G PG P + P P P
Sbjct: 116 PPGPPGPDGNAGPEGPSGAPGADGDAAGPGEAGPAGPAGPPGP 158
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/46 (34%), Positives = 19/46 (41%), Gaps = 3/46 (6%)
Frame = +3
Query: 801 PPPPPL-PXKXXXPXXPXGKPGXP--PKXKXPXXSSPPSGXSPXXP 929
P P P+ P P P G PG P P + P PP+ P P
Sbjct: 227 PSPGPVDPSDEPSPSDPPGPPGPPGPPTRRPPGPPGPPTRRPPGPP 272
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 3/45 (6%)
Frame = +3
Query: 804 PPPPLPXKXXXPXXPXGKP---GXPPKXKXPXXSSPPSGXSPXXP 929
PPP LP P P G P G PP + PP G P P
Sbjct: 55 PPPSLPPSTMPPG-PHGMPFMGGPPPHHQYHLQYPPPHGLGPPPP 98
>AF036699-5|AAB88359.1| 290|Caenorhabditis elegans Collagen protein
105 protein.
Length = 290
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = +3
Query: 801 PPPPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSPXXP 929
P P P K P P G PG PP+ + PP P P
Sbjct: 102 PGRPGRPGKPGVPGMP-GNPGKPPQQPCELVTPPPCSPCPAGP 143
>Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical
protein T11F9.9 protein.
Length = 299
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = +3
Query: 801 PPPPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSPXXP 929
P P P K P P G PG PP+ + PP P P
Sbjct: 111 PGKPGRPGKPGAPGLP-GNPGRPPQQPCDPITPPPCQPCPQGP 152
>Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical
protein F55C10.3 protein.
Length = 266
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = +3
Query: 801 PPPPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSPXXP 929
P P P K P P G PG PP+ + PP P P
Sbjct: 78 PGKPGRPGKPGAPGLP-GNPGHPPQQPCDPITPPPCQPCPQGP 119
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical
protein F55C10.2 protein.
Length = 299
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = +3
Query: 801 PPPPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSPXXP 929
P P P K P P G PG PP+ + PP P P
Sbjct: 111 PGKPGRPGKPGAPGLP-GNPGRPPQQPCDPITPPPCQPCPQGP 152
>Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical
protein C29F4.1 protein.
Length = 299
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = +3
Query: 801 PPPPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSPXXP 929
P P P K P P G PG PP+ + PP P P
Sbjct: 111 PGKPGRPGKPGAPGLP-GNPGRPPQQPCEPITPPPCKPCPAGP 152
>Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.6 protein.
Length = 299
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = +3
Query: 801 PPPPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSPXXP 929
P P P K P P G PG PP+ + PP P P
Sbjct: 111 PGKPGRPGKPGAPGLP-GNPGRPPQQPCEPITPPPCKPCPAGP 152
>Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.4 protein.
Length = 299
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = +3
Query: 801 PPPPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSPXXP 929
P P P K P P G PG PP+ + PP P P
Sbjct: 111 PGKPGRPGKPGAPGLP-GNPGRPPQQPCEPITPPPCKPCPAGP 152
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = +3
Query: 801 PPPPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSPXXP 929
P P P K P P G PG PP+ + PP P P
Sbjct: 111 PGKPGRPGKPGAPGLP-GNPGRPPQQPCEPITPPPCKPCPQGP 152
>AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-3) protein.
Length = 299
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = +3
Query: 801 PPPPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSPXXP 929
P P P K P P G PG PP+ + PP P P
Sbjct: 111 PGKPGRPGKPGAPGLP-GNPGRPPQQPCEPITPPPCKPCPAGP 152
>AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-117) protein.
Length = 299
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = +3
Query: 801 PPPPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSPXXP 929
P P P K P P G PG PP+ + PP P P
Sbjct: 111 PGKPGRPGKPGAPGLP-GNPGRPPQQPCEPITPPPCKPCPAGP 152
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = +3
Query: 801 PPPPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSPXXP 929
P P P K P P G PG PP+ + PP P P
Sbjct: 111 PGKPGRPGKPGAPGLP-GNPGRPPQQPCEPITPPPCKPCPQGP 152
>AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen protein
108 protein.
Length = 304
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = +3
Query: 801 PPPPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSPXXP 929
P P P K P P G PG PP+ + PP P P
Sbjct: 116 PGKPGRPGKAGAPGLP-GNPGRPPQQPCEPITPPPCKPCPQGP 157
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = +3
Query: 801 PPPPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSPXXP 929
P P P K P P G PG PP+ + PP P P
Sbjct: 101 PGKPGKPGKPGAPGQP-GTPGRPPQQPCEPTTPPPCQPCPQGP 142
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/43 (32%), Positives = 15/43 (34%)
Frame = +3
Query: 801 PPPPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSPXXP 929
PPPPP P P G P PP P S + P
Sbjct: 630 PPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGGPASVLAKLPP 672
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/43 (30%), Positives = 13/43 (30%)
Frame = +3
Query: 801 PPPPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSPXXP 929
PPPPP P P PP P P G P
Sbjct: 609 PPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPP 651
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/43 (32%), Positives = 15/43 (34%)
Frame = +3
Query: 801 PPPPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSPXXP 929
PPPPP P P G P PP P S + P
Sbjct: 456 PPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGGPASVLAKLPP 498
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/43 (30%), Positives = 13/43 (30%)
Frame = +3
Query: 801 PPPPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSPXXP 929
PPPPP P P PP P P G P
Sbjct: 435 PPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPP 477
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = +3
Query: 801 PPPPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSPXXP 929
PPPPP+ P P P PP+ P PP P P
Sbjct: 32 PPPPPMCAPPPLPCPP--PPICPPQFCPPPPMCPPPPPPPPPP 72
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/43 (32%), Positives = 15/43 (34%)
Frame = +3
Query: 801 PPPPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSPXXP 929
P PP P P P G+PG P PP P P
Sbjct: 187 PTGPPGPPGKQGPKGPNGEPGAPGTPGGNALPGPPGPPGPQGP 229
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/46 (34%), Positives = 18/46 (39%)
Frame = +3
Query: 801 PPPPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSPXXPKXN 938
PPPPPLP P P PP S PP+ P+ N
Sbjct: 490 PPPPPLPPIATPSSVP--PPPPPPPALEQEISGPPTVRLTAVPESN 533
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/47 (34%), Positives = 18/47 (38%), Gaps = 3/47 (6%)
Frame = +3
Query: 798 FPPP---PPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSPXXP 929
+PPP PP P P G PG P + P PP G P
Sbjct: 159 YPPPRGYPPAPAPGVY-MPPPGMPGAYPPPRMPIGHGPPGGPPMPGP 204
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/47 (34%), Positives = 18/47 (38%), Gaps = 3/47 (6%)
Frame = +3
Query: 798 FPPP---PPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSPXXP 929
+PPP PP P P G PG P + P PP G P
Sbjct: 159 YPPPRGYPPAPAPGVY-MPPPGMPGAYPPPRMPIGHGPPGGPPMPGP 204
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +3
Query: 801 PPPPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSPXXP 929
PPPPP P + P P P PP P PP P P
Sbjct: 55 PPPPPCPAQ-FCPPPPICPP--PPPPPMPCPPPPPPMPRPSCP 94
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/46 (32%), Positives = 18/46 (39%), Gaps = 2/46 (4%)
Frame = +3
Query: 801 PPPPPLPXKXXXPXXPXGKPGXPPKXKXP--XXSSPPSGXSPXXPK 932
PPPPP P P P +P P + P S P P P+
Sbjct: 72 PPPPPPPMPCPPPPPPMPRPSCPCMMQRPSFYPSYVPQYYQPMMPQ 117
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = +3
Query: 801 PPPPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSPXXP 929
P P P K P P G PG PP+ + PP P P
Sbjct: 111 PGKPGRPGKPGAPGLP-GNPGRPPQQPCEPITPPPWKPCPQGP 152
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = +3
Query: 804 PPPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSPXXP 929
PPPP P P G+PG P + P + SP P
Sbjct: 210 PPPPGPPGPPGPPGNDGQPGAPGQDGQPGAPGTNTVNSPGGP 251
>Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.6 protein.
Length = 290
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = -1
Query: 928 GXXGLXPEGGEEXXGXXFXGGXPGXPXGXXGXXXFXGRGGGGG 800
G G +GG+ G G PG P G G G+ GG G
Sbjct: 185 GHPGAPGQGGQRSRGTPGPAGAPG-PQGPAGGPGQPGQSGGAG 226
>Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.4 protein.
Length = 290
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = -1
Query: 928 GXXGLXPEGGEEXXGXXFXGGXPGXPXGXXGXXXFXGRGGGGG 800
G G +GG+ G G PG P G G G+ GG G
Sbjct: 185 GHPGAPGQGGQRSRGTPGPSGAPG-PQGPAGGPGQPGQSGGAG 226
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/44 (34%), Positives = 18/44 (40%)
Frame = -1
Query: 928 GXXGLXPEGGEEXXGXXFXGGXPGXPXGXXGXXXFXGRGGGGGK 797
G G GG+ G GG G G G +GGGGG+
Sbjct: 157 GGGGRGGSGGQGGWGGSQDGGSQGGWGGQNGGGQGGNQGGGGGR 200
>X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein.
Length = 318
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +3
Query: 801 PPPPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSP 920
PP P P P G+PG P P S P G P
Sbjct: 241 PPGPIGEMGPPGPPGPRGEPGPPGPFGPPGDSGEPGGHCP 280
>U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 7 protein.
Length = 318
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +3
Query: 801 PPPPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSP 920
PP P P P G+PG P P S P G P
Sbjct: 241 PPGPIGEMGPPGPPGPRGEPGPPGPFGPPGDSGEPGGHCP 280
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 28.3 bits (60), Expect = 8.4
Identities = 14/46 (30%), Positives = 15/46 (32%)
Frame = +3
Query: 801 PPPPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSPXXPKXN 938
PP PP P P P G PG P + P P N
Sbjct: 105 PPGPPGPDGSAGPAGPAGNPGADGDAGSPGEAGGAGPPGPPGPDGN 150
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 28.3 bits (60), Expect = 8.4
Identities = 14/46 (30%), Positives = 15/46 (32%)
Frame = +3
Query: 801 PPPPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSPXXPKXN 938
PP PP P P P G PG P + P P N
Sbjct: 105 PPGPPGPDGSAGPAGPAGNPGADGDAGSPGEAGGAGPPGPPGPDGN 150
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/46 (32%), Positives = 17/46 (36%), Gaps = 5/46 (10%)
Frame = +3
Query: 807 PPPLPXKXXXPXXPX-----GKPGXPPKXKXPXXSSPPSGXSPXXP 929
PP P + P P G PG PPK + PP P P
Sbjct: 97 PPGTPGRAGRPGKPGAPGLNGNPGRPPKEPCEPITPPPCKPCPEGP 142
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = +3
Query: 801 PPPPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSPXXP 929
P P P K P P G PG PP + PP P P
Sbjct: 116 PGNPGRPGKPGAPGLP-GNPGKPPVQPCEPITPPPCKPCPDGP 157
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/48 (33%), Positives = 18/48 (37%), Gaps = 2/48 (4%)
Frame = +3
Query: 801 PPPPPLP--XKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSPXXPKXN 938
PPPPPLP P P PP S PP+ P+ N
Sbjct: 497 PPPPPLPPIATPSSVPPPPPPPPPPPPALEQEISGPPTVRLTAVPESN 544
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 28.3 bits (60), Expect = 8.4
Identities = 18/62 (29%), Positives = 20/62 (32%), Gaps = 1/62 (1%)
Frame = +1
Query: 667 PPPQXPPPKXWXXXXKX-GAXPGXXXKXXXGXSPPGGXPXGGTXXXXXXXXXXXKXXPPX 843
PPPQ PP + GA G G PPGG G+ PP
Sbjct: 380 PPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPG 439
Query: 844 PP 849
P
Sbjct: 440 GP 441
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/47 (34%), Positives = 16/47 (34%), Gaps = 1/47 (2%)
Frame = +3
Query: 801 PPPPPLPXKXXXP-XXPXGKPGXPPKXKXPXXSSPPSGXSPXXPKXN 938
PPPPP P P P P PP PP P K N
Sbjct: 1357 PPPPPPPTMSKAPTGVPLPVPPPPPLFSPSMILPPPPPPLPSEEKKN 1403
>AC006790-10|AAF60736.1| 371|Caenorhabditis elegans Collagen
protein 71 protein.
Length = 371
Score = 28.3 bits (60), Expect = 8.4
Identities = 14/44 (31%), Positives = 16/44 (36%)
Frame = +3
Query: 801 PPPPPLPXKXXXPXXPXGKPGXPPKXKXPXXSSPPSGXSPXXPK 932
PP P P G PG PP+ + PP P PK
Sbjct: 182 PPGRPGPNGKAGANGLNGNPGRPPEAPCEPVTPPPCPPCPAGPK 225
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,914,514
Number of Sequences: 27780
Number of extensions: 196183
Number of successful extensions: 2013
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1754
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2423194158
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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