Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_K24
         (945 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0833 - 25196091-25196372,25196464-25196565,25196640-251968...    31   1.3  
01_01_0755 - 5827893-5829764                                           29   4.1  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   9.4  
01_01_1209 - 9738501-9738516,9738703-9739161,9739389-9739608,973...    28   9.4  

>06_03_0833 -
           25196091-25196372,25196464-25196565,25196640-25196838,
           25196978-25197278,25197471-25197645,25197842-25198012,
           25198207-25198239
          Length = 420

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 16/53 (30%), Positives = 21/53 (39%)
 Frame = +2

Query: 518 CWRFSIGSAPLTSITKIDAQVRXGETRQDYKDTRRFPLEAPSCALLFRPCRLP 676
           CWR  +        T  D Q    +    +KD    P + PSC L+F P   P
Sbjct: 283 CWRHFLNQDFAMFATAGDDQWNPEDHLPSFKDDSLIPYDVPSCHLIFIPLLQP 335


>01_01_0755 - 5827893-5829764
          Length = 623

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = -2

Query: 716 VXXGSSEEKADRYPVSGRVGTGERTRELPGGNAWYLYS 603
           V  G+S+E+AD Y +   V  G   +E  GG   + Y+
Sbjct: 499 VYTGTSDEEADEYTLISHVKLGVNEKETSGGKMGFSYN 536


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +2

Query: 299 NESAN---ARGEAVCVLGALPLPRSLTRCAR 382
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>01_01_1209 -
           9738501-9738516,9738703-9739161,9739389-9739608,
           9739708-9739831,9739927-9740635,9741826-9742132,
           9742213-9743704
          Length = 1108

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = +1

Query: 625 PPGSSLVRSPVPTLPLTGYLSAFSSELP 708
           PP SSL+  P P  PL     AFS E+P
Sbjct: 18  PPASSLLPPPQPEPPLRADRLAFSLEVP 45


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,268,114
Number of Sequences: 37544
Number of extensions: 377750
Number of successful extensions: 1151
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1151
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2717819680
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)