Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_K24
         (945 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF304125-1|AAG50238.1|  542|Caenorhabditis elegans 1D304 protein.      30   2.8  
AC024201-8|AAF36020.1|  542|Caenorhabditis elegans Hypothetical ...    30   2.8  
Z75545-3|CAA99886.1|  922|Caenorhabditis elegans Hypothetical pr...    29   3.7  
AC087081-12|AAK66039.2|  324|Caenorhabditis elegans Hypothetical...    28   8.5  

>AF304125-1|AAG50238.1|  542|Caenorhabditis elegans 1D304 protein.
          Length = 542

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = +2

Query: 608 KDTRRFPLEAPSCALLFRPCRLPDTCPPSPR 700
           +D+R    E+P+ AL+  P R P +CPP PR
Sbjct: 473 EDSRDSAYESPTSALM--PRRPPPSCPPPPR 501


>AC024201-8|AAF36020.1|  542|Caenorhabditis elegans Hypothetical
           protein Y71F9B.8 protein.
          Length = 542

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = +2

Query: 608 KDTRRFPLEAPSCALLFRPCRLPDTCPPSPR 700
           +D+R    E+P+ AL+  P R P +CPP PR
Sbjct: 473 EDSRDSAYESPTSALM--PRRPPPSCPPPPR 501


>Z75545-3|CAA99886.1|  922|Caenorhabditis elegans Hypothetical
           protein K10D3.4 protein.
          Length = 922

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 17/39 (43%), Positives = 18/39 (46%)
 Frame = +2

Query: 629 LEAPSCALLFRPCRLPDTCPPSPRNCLLXXVSXLFTYRT 745
           LE   C  L    RLP+ CPP P N  L  V     YRT
Sbjct: 846 LERYICCGLESDVRLPNVCPPQPAN--LVPVELAGNYRT 882


>AC087081-12|AAK66039.2|  324|Caenorhabditis elegans Hypothetical
           protein Y82E9BL.17 protein.
          Length = 324

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -2

Query: 533 WKNASNAAFLRFLAFCXPFAHMF 465
           WKN  N  F  +   C PF H+F
Sbjct: 212 WKNTKNFCFDNYELECPPFEHLF 234


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,783,448
Number of Sequences: 27780
Number of extensions: 293119
Number of successful extensions: 790
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 744
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 790
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2444174194
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)