Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_K23
         (1060 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    29   0.001
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            31   0.044

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 29.5 bits (63), Expect = 0.18
 Identities = 9/9 (100%), Positives = 9/9 (100%)
 Frame = -3

Query: 692 PPPPPPPPP 666
           PPPPPPPPP
Sbjct: 783 PPPPPPPPP 791



 Score = 29.5 bits (63), Expect(2) = 0.001
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -3

Query: 692 PPPPPPPPPXXXXGG 648
           PPPPPPPP     GG
Sbjct: 784 PPPPPPPPSSLSPGG 798



 Score = 26.2 bits (55), Expect(2) = 0.001
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = -3

Query: 728 PPPPPXXFFXXXPPPPPPPPP 666
           P P    F      PPPPPPP
Sbjct: 769 PSPSRSAFADGIGSPPPPPPP 789



 Score = 22.2 bits (45), Expect(2) = 4.0
 Identities = 8/17 (47%), Positives = 8/17 (47%)
 Frame = -3

Query: 731 PPPPPPXXFFXXXPPPP 681
           PPPPPP        P P
Sbjct: 786 PPPPPPSSLSPGGVPRP 802



 Score = 20.6 bits (41), Expect(2) = 4.0
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = -3

Query: 755 GXGXXXXXPPPPP 717
           G G     PPPPP
Sbjct: 779 GIGSPPPPPPPPP 791


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 31.5 bits (68), Expect = 0.044
 Identities = 16/39 (41%), Positives = 16/39 (41%)
 Frame = -3

Query: 731 PPPPPPXXFFXXXPPPPPPPPPXXXXGGXXXXXXXXPPP 615
           PPP PP       PPPP  PPP    GG         PP
Sbjct: 581 PPPAPP-------PPPPMGPPPSPLAGGPLGGPAGSRPP 612



 Score = 29.1 bits (62), Expect = 0.23
 Identities = 12/27 (44%), Positives = 12/27 (44%)
 Frame = -3

Query: 749 GXXXXXPPPPPPXXFFXXXPPPPPPPP 669
           G     PPPPPP       PP   PPP
Sbjct: 525 GGPLGPPPPPPPGGAVLNIPPQFLPPP 551



 Score = 26.6 bits (56), Expect = 1.2
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = -3

Query: 731 PPPPPPXXFFXXXPPPPPPPPP 666
           PPPPPP        PP   PPP
Sbjct: 530 PPPPPPPGGAVLNIPPQFLPPP 551


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 548,198
Number of Sequences: 2352
Number of extensions: 11345
Number of successful extensions: 163
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 119
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 117985413
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)