Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_K17
(896 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome al... 154 7e-38
Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical pr... 84 1e-16
Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical pr... 78 1e-14
Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical pr... 72 5e-13
Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical pr... 69 6e-12
AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome al... 66 4e-11
Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical pr... 55 6e-08
AL021493-3|CAA16390.2| 243|Caenorhabditis elegans Hypothetical ... 30 2.6
AL023837-3|CAB63348.2| 283|Caenorhabditis elegans Hypothetical ... 29 3.4
AL021472-1|CAA16299.2| 397|Caenorhabditis elegans Hypothetical ... 29 3.4
Z81487-4|CAB03998.2| 420|Caenorhabditis elegans Hypothetical pr... 29 6.0
U50199-2|AAP46272.1| 169|Caenorhabditis elegans Pharyngeal enha... 29 6.0
U50199-1|AAA91262.1| 427|Caenorhabditis elegans Pharyngeal enha... 29 6.0
AF160187-1|AAD42897.1| 425|Caenorhabditis elegans pharyngeal en... 29 6.0
AF022983-5|AAK82915.1| 79|Caenorhabditis elegans Hypothetical ... 29 6.0
AF022980-10|AAG24193.1| 350|Caenorhabditis elegans Serpentine r... 29 6.0
AC006672-3|AAK84540.1| 239|Caenorhabditis elegans Proteasome be... 29 6.0
Z81531-2|CAB04316.1| 422|Caenorhabditis elegans Hypothetical pr... 28 7.9
U50308-5|AAG24033.2| 284|Caenorhabditis elegans Seven tm recept... 28 7.9
AF273800-1|AAG15149.1| 272|Caenorhabditis elegans nuclear recep... 28 7.9
>AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome alpha
subunit protein 3 protein.
Length = 250
Score = 154 bits (374), Expect = 7e-38
Identities = 71/106 (66%), Positives = 90/106 (84%)
Frame = +1
Query: 157 MARRYDTRTTIFSPEGRLYQVEYAMEAISHAGTSLGILATDGILLAAERRNTNKLLDEVF 336
MARRYD+RTTIFSPEGRLYQVEYAMEAISHAGT LGIL+++GI++AAER+N +KLLD+
Sbjct: 1 MARRYDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILSSEGIVVAAERKNVHKLLDDSV 60
Query: 337 FSEKIYKLNDDMVCSVAGITSDANVLTNELRLIAQRYLLQYGESIP 474
+EK+Y+L+D++ C+VAGIT+DAN+L N LR A Y YGE +P
Sbjct: 61 MTEKVYRLSDNISCTVAGITADANILINHLRWWAASYRNSYGEEMP 106
Score = 129 bits (312), Expect = 2e-30
Identities = 65/104 (62%), Positives = 76/104 (73%)
Frame = +2
Query: 479 EQLVSWLCDVKQAYTQYGGKRPFGVSILYMGWDKHYGYQLYQSDPSGNYGGWKATCIGNN 658
EQLV LC+ KQ YTQ GGKRPFGVS+LY+GWDKHYGYQLYQSDPSGNY GWKATCIG+N
Sbjct: 108 EQLVQNLCNEKQRYTQIGGKRPFGVSLLYIGWDKHYGYQLYQSDPSGNYTGWKATCIGSN 167
Query: 659 SAAAVQV*NRSTRKMRHSGKSTSPGNQVLSKTLDMTKLTPXKVE 790
AAV + + K + ++ +VL KTLD+ KL KVE
Sbjct: 168 HQAAVTL-LKQEYKSPNLEEAKQLAIKVLWKTLDV-KLASEKVE 209
>Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical
protein F25H2.9 protein.
Length = 248
Score = 84.2 bits (199), Expect = 1e-16
Identities = 42/101 (41%), Positives = 63/101 (62%)
Frame = +1
Query: 169 YDTRTTIFSPEGRLYQVEYAMEAISHAGTSLGILATDGILLAAERRNTNKLLDEVFFSEK 348
YD FSPEGRL+QVEYA+EA+ TS+GI ++G+LLAAE+R+T+KL+ EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAVKLGSTSIGIKTSEGVLLAAEKRSTSKLMVNDAI-EK 66
Query: 349 IYKLNDDMVCSVAGITSDANVLTNELRLIAQRYLLQYGESI 471
I K++ + + AG+ +D+ L ++ AQ + Y I
Sbjct: 67 ISKVDQHIGVTFAGLIADSRTLVERAQIEAQNFWFTYNRKI 107
Score = 38.7 bits (86), Expect = 0.006
Identities = 21/46 (45%), Positives = 28/46 (60%)
Frame = +2
Query: 539 RPFGVSILYMGWDKHYGYQLYQSDPSGNYGGWKATCIGNNSAAAVQ 676
RPFGV++L+ G D+ G +L+ DPSG + KA IG S A Q
Sbjct: 134 RPFGVAMLFAGVDQE-GAKLFHLDPSGTFIDCKAKSIGAASDGAEQ 178
>Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical
protein C36B1.4 protein.
Length = 253
Score = 77.8 bits (183), Expect = 1e-14
Identities = 37/96 (38%), Positives = 60/96 (62%)
Frame = +1
Query: 166 RYDTRTTIFSPEGRLYQVEYAMEAISHAGTSLGILATDGILLAAERRNTNKLLDEVFFSE 345
RYD TIFSP+G L+QVEYA EA+ T++G+ D I++ E+++ L D+
Sbjct: 3 RYDRAITIFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDCIVIGVEKKSIPALQDDRTI-R 61
Query: 346 KIYKLNDDMVCSVAGITSDANVLTNELRLIAQRYLL 453
KI+ ++D ++ + AG+++DA VL + R+ Q Y L
Sbjct: 62 KIHMIDDHVMLAFAGLSADARVLVDRARIECQSYKL 97
Score = 46.0 bits (104), Expect = 4e-05
Identities = 20/53 (37%), Positives = 34/53 (64%)
Frame = +2
Query: 494 WLCDVKQAYTQYGGKRPFGVSILYMGWDKHYGYQLYQSDPSGNYGGWKATCIG 652
++ + KQ +TQ G+RPFG+S+L G+D +L++++PSG Y + A G
Sbjct: 111 YIANTKQRFTQSPGRRPFGISMLIGGFDHDGTPRLFKTEPSGAYYEYVANATG 163
>Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical
protein D1054.2 protein.
Length = 231
Score = 72.1 bits (169), Expect = 5e-13
Identities = 35/64 (54%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Frame = +2
Query: 482 QLVSWLCDVKQAYTQYGGKRPFGVSILYMGWDKHYGYQ-LYQSDPSGNYGGWKATCIGNN 658
QLV+ + V Q YTQ GG RPFG S+L GWDK+ G L+Q DPSG Y WKAT +G N
Sbjct: 105 QLVTDIAAVMQEYTQSGGVRPFGASLLIAGWDKNPGRPLLFQCDPSGAYFAWKATALGKN 164
Query: 659 SAAA 670
A
Sbjct: 165 DVNA 168
Score = 70.1 bits (164), Expect = 2e-12
Identities = 36/106 (33%), Positives = 58/106 (54%)
Frame = +1
Query: 157 MARRYDTRTTIFSPEGRLYQVEYAMEAISHAGTSLGILATDGILLAAERRNTNKLLDEVF 336
M Y T FSP G+L Q+EYA+ A+ + S+G+ A DG++LA E N +L +
Sbjct: 1 MGDHYGFSLTTFSPSGKLMQIEYALNAVKNGQPSVGLRAKDGVVLATE--NVGSVLTD-- 56
Query: 337 FSEKIYKLNDDMVCSVAGITSDANVLTNELRLIAQRYLLQYGESIP 474
K+ +++ + C +G+ D +L + R IA Y + YGE +P
Sbjct: 57 DQPKVEQISKHIGCVYSGMGPDFRILVKKARKIAMEYEMMYGEEMP 102
>Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical
protein ZK945.2 protein.
Length = 250
Score = 68.5 bits (160), Expect = 6e-12
Identities = 34/102 (33%), Positives = 62/102 (60%)
Frame = +1
Query: 169 YDTRTTIFSPEGRLYQVEYAMEAISHAGTSLGILATDGILLAAERRNTNKLLDEVFFSEK 348
YD + FSP+GR++QVEYA +A+ +AGT + I +G+++ A++ ++KL + + +
Sbjct: 8 YDLAASTFSPDGRIFQVEYAQKAVDNAGTMIAIRGKNGVVVVADKLISSKLYTD-NANPR 66
Query: 349 IYKLNDDMVCSVAGITSDANVLTNELRLIAQRYLLQYGESIP 474
++ +ND++ +VAG D L N A ++L Y E +P
Sbjct: 67 MFNVNDNVGVAVAGNYPDGFALKNYAYGEAMKWLKDYREPMP 108
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +2
Query: 530 GGKRPFGVSILYMGWDKHYGYQLYQSDPSGNYGGWKATCIGNNSAAA 670
G RPFG +M W+K G +L+ +PSG +KA +G + AA
Sbjct: 126 GISRPFGAGAFFMSWNKQTGGRLFLVEPSGLNYEYKAWAVGKHRQAA 172
>AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome alpha
subunit protein 6 protein.
Length = 260
Score = 65.7 bits (153), Expect = 4e-11
Identities = 32/103 (31%), Positives = 58/103 (56%)
Frame = +1
Query: 166 RYDTRTTIFSPEGRLYQVEYAMEAISHAGTSLGILATDGILLAAERRNTNKLLDEVFFSE 345
+YD T++SP+GRL+QVEYA+EA+ ++GI + ++ A +R N L +
Sbjct: 5 QYDGDVTVWSPQGRLHQVEYAVEAMKQGSATVGIKSETHAVIVALKRAQNDLSSH---QK 61
Query: 346 KIYKLNDDMVCSVAGITSDANVLTNELRLIAQRYLLQYGESIP 474
K+Y+++ S+AG+ SD +L L+ + Y +++P
Sbjct: 62 KVYEIDTHAGVSIAGLLSDGRILARYLQTECSSWRWDYKQAVP 104
Score = 49.2 bits (112), Expect = 4e-06
Identities = 26/53 (49%), Positives = 31/53 (58%)
Frame = +2
Query: 512 QAYTQYGGKRPFGVSILYMGWDKHYGYQLYQSDPSGNYGGWKATCIGNNSAAA 670
QA TQY G+RPFGV IL G+DK G + Q+DPS T IG S +A
Sbjct: 117 QANTQYYGRRPFGVGILIAGYDKD-GAHIIQTDPSAEVVSMHGTSIGARSQSA 168
>Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical
protein C15H11.7 protein.
Length = 246
Score = 55.2 bits (127), Expect = 6e-08
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
Frame = +1
Query: 169 YDTRTTIFSPEGRLYQVEYAMEAISHAG-TSLGILATDGILLAAERRNTNKLL--DEVFF 339
+D TIFSPEGR+YQVEYA +AI+ T++ + D ++A ++R + L+ D V
Sbjct: 9 FDRHITIFSPEGRVYQVEYAFKAINSTNLTAVAVKGADAAVIAVQKRVPDSLIVADTV-- 66
Query: 340 SEKIYKLNDDMVCSVAGITSDANVLTNELRLIAQRYLLQYGESIP 474
+Y+++ + C G+ DA + A + + G +P
Sbjct: 67 -TSVYQISQSVGCCAIGMIPDAKFQIKRAQGEAASWKYKNGYDMP 110
Score = 48.8 bits (111), Expect = 5e-06
Identities = 37/129 (28%), Positives = 56/129 (43%), Gaps = 21/129 (16%)
Frame = +2
Query: 479 EQLVSWLCDVKQAYTQYGGKRPFGVSILYMGWDKHYGYQLYQSDPSGNYGGWKATCIGNN 658
E L + D+ Q YTQ R G ++L++ +D G ++Y+ DP+G Y G K +G
Sbjct: 112 ELLAKKMADLNQYYTQNAEMRSLGCALLFISYDDEKGPEVYRVDPAGYYRGMKGVSVGVK 171
Query: 659 SAAAVQV*NRSTRK-----------MRHSGKSTSPGNQVLSKTLDM----------TKLT 775
A + +K + TS G V SK L++ TKLT
Sbjct: 172 QLPATSFLEKKIKKKSELTSTEAIELAIEALQTSLGIDVRSKDLEVVVVTKDNSKFTKLT 231
Query: 776 PXKVEWHIN 802
+VE H+N
Sbjct: 232 SDQVEHHLN 240
>AL021493-3|CAA16390.2| 243|Caenorhabditis elegans Hypothetical
protein Y51A2B.3 protein.
Length = 243
Score = 29.9 bits (64), Expect = 2.6
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = -1
Query: 569 PYTELRLQRAFYLHIVCKLVSHHKARRLIAHQGIDSPYCSRYL*AIS--LNSFVKTL 405
PY EL L +I+C++V ++ RRL QG R+L IS L+S+ K L
Sbjct: 136 PYLELNLTETEVTYILCQIVCNYAGRRL---QGQIQAAGERFLEEISDNLHSYYKNL 189
>AL023837-3|CAB63348.2| 283|Caenorhabditis elegans Hypothetical
protein Y37H2C.4 protein.
Length = 283
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/49 (26%), Positives = 26/49 (53%)
Frame = -3
Query: 231 HSIFDLIQTTFRREYGCTGIITSCHFLYKYILFVIDMTKLIVTFVEMRF 85
H I ++ T + YG + + +CHF+Y+Y I+ + ++ V+ F
Sbjct: 42 HDITLVLLTVYSSCYGSSMSVFACHFIYRYGAVNINFMQKYISGVKQGF 90
>AL021472-1|CAA16299.2| 397|Caenorhabditis elegans Hypothetical
protein Y17D7B.1 protein.
Length = 397
Score = 29.5 bits (63), Expect = 3.4
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
Frame = -1
Query: 659 YC--YRCMLLSTPHSFHWDQTGRADNH-SAYPSPYTELRLQRAFYLHIVCKLVSHHKARR 489
YC Y + PH+F G+ + PY EL L +I+C++V ++ RR
Sbjct: 255 YCVDYSHVWSQGPHTFENVFGGKMIRYFDIIVKPYLELNLSETEVTYILCQIVWNYAGRR 314
Query: 488 LIAHQGIDSPYCSRYL*AISLN 423
L QG R+L IS N
Sbjct: 315 L---QGQTQAAGERFLEEISNN 333
>Z81487-4|CAB03998.2| 420|Caenorhabditis elegans Hypothetical
protein C54E10.5 protein.
Length = 420
Score = 28.7 bits (61), Expect = 6.0
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = -1
Query: 569 PYTELRLQRAFYLHIVCKLVSHHKARRLIAHQGIDSPYCSRYL*AISLN 423
PY EL L +I+C++V ++ RRL QG R+L IS N
Sbjct: 311 PYLELNLSETEVTYILCQIVWNYAGRRL---QGQTQAAGERFLEEISNN 356
>U50199-2|AAP46272.1| 169|Caenorhabditis elegans Pharyngeal
enhancer binding protein1, isoform b protein.
Length = 169
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +2
Query: 503 DVKQAYTQYGGKRPFGVSILYMGWDKHYGYQLYQSDPSGNYGGWKATC 646
D+ Q T + G + ++Y G Y Y +YQ P N+ W+ C
Sbjct: 49 DIPQIVTSFKGYQ----KLMYQG----YRYNIYQIAPERNFKSWRCVC 88
>U50199-1|AAA91262.1| 427|Caenorhabditis elegans Pharyngeal
enhancer binding protein1, isoform a protein.
Length = 427
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +2
Query: 503 DVKQAYTQYGGKRPFGVSILYMGWDKHYGYQLYQSDPSGNYGGWKATC 646
D+ Q T + G + ++Y G Y Y +YQ P N+ W+ C
Sbjct: 49 DIPQIVTSFKGYQ----KLMYQG----YRYNIYQIAPERNFKSWRCVC 88
>AF160187-1|AAD42897.1| 425|Caenorhabditis elegans pharyngeal
enhancer binding protein-1 protein.
Length = 425
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +2
Query: 503 DVKQAYTQYGGKRPFGVSILYMGWDKHYGYQLYQSDPSGNYGGWKATC 646
D+ Q T + G + ++Y G Y Y +YQ P N+ W+ C
Sbjct: 47 DIPQIVTSFKGYQ----KLMYQG----YRYNIYQIAPERNFKSWRCVC 86
>AF022983-5|AAK82915.1| 79|Caenorhabditis elegans Hypothetical
protein R13D11.10 protein.
Length = 79
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +2
Query: 569 GWDKHYGYQLYQSDPSGNYGGWKATCIG 652
GW GY Y P G YGGW +G
Sbjct: 38 GWGGRGGYGGYGYRPYGGYGGWGGRGMG 65
>AF022980-10|AAG24193.1| 350|Caenorhabditis elegans Serpentine
receptor, class j protein44 protein.
Length = 350
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 4/28 (14%)
Frame = -1
Query: 671 LLQHYCYRCMLLS----TPHSFHWDQTG 600
L+ H+ YR +++S T H FHW TG
Sbjct: 109 LMSHFIYRYLVISDSSLTRHHFHWFMTG 136
>AC006672-3|AAK84540.1| 239|Caenorhabditis elegans Proteasome beta
subunit protein 1 protein.
Length = 239
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/45 (28%), Positives = 20/45 (44%)
Frame = +2
Query: 527 YGGKRPFGVSILYMGWDKHYGYQLYQSDPSGNYGGWKATCIGNNS 661
Y + S+L GWD+ G Q+Y G ++T G+ S
Sbjct: 111 YNYREQLSASVLVAGWDEELGGQVYAIPIGGFVSRQRSTASGSGS 155
>Z81531-2|CAB04316.1| 422|Caenorhabditis elegans Hypothetical
protein F36D3.2 protein.
Length = 422
Score = 28.3 bits (60), Expect = 7.9
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = -1
Query: 569 PYTELRLQRAFYLHIVCKLVSHHKARRLIAHQGIDSPYCSRYL*AISLN 423
PY EL L +I+C++V ++ RRL QG R+L IS N
Sbjct: 310 PYLELELSDTEIAYILCQIVWNYAGRRL---QGQTQAAGERFLEVISNN 355
>U50308-5|AAG24033.2| 284|Caenorhabditis elegans Seven tm receptor
protein 94 protein.
Length = 284
Score = 28.3 bits (60), Expect = 7.9
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -3
Query: 216 LIQTTFRREYGCTGIITSCHFLYKYILFV 130
+I T+ YG T ++ + HF+Y+YI +
Sbjct: 89 IIIPTYCTSYGLTLVLLAIHFVYRYIAMI 117
>AF273800-1|AAG15149.1| 272|Caenorhabditis elegans nuclear receptor
NHR-54 protein.
Length = 272
Score = 28.3 bits (60), Expect = 7.9
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = -1
Query: 569 PYTELRLQRAFYLHIVCKLVSHHKARRLIAHQGIDSPYCSRYL*AISLN 423
PY EL L +I+C++V ++ RRL QG R+L IS N
Sbjct: 160 PYLELELSDTEIAYILCQIVWNYAGRRL---QGQTQAAGERFLEVISNN 205
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,220,057
Number of Sequences: 27780
Number of extensions: 420008
Number of successful extensions: 1153
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1092
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1148
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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