Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_K16
(951 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC042195-1|AAH42195.2| 390|Homo sapiens malonyl CoA:ACP acyltra... 93 2e-18
BC030985-1|AAH30985.1| 180|Homo sapiens malonyl CoA:ACP acyltra... 93 2e-18
AL359403-1|CAB94790.1| 180|Homo sapiens hypothetical protein pr... 93 2e-18
AL359401-1|CAB94789.1| 390|Homo sapiens hypothetical protein pr... 93 2e-18
AL022237-3|CAA18261.1| 390|Homo sapiens protein ( Human DNA seq... 93 2e-18
BC039593-1|AAH39593.1| 913|Homo sapiens ubiquitin specific pept... 36 0.29
AY074877-1|AAL79676.1| 913|Homo sapiens pVHL-interacting deubiq... 36 0.29
AL158207-6|CAC88170.1| 914|Homo sapiens ubiquitin specific pept... 36 0.29
AB023220-1|BAA76847.2| 917|Homo sapiens KIAA1003 protein protein. 36 0.29
DQ001411-1|AAY17216.1| 696|Homo sapiens neuregulin-3 protein. 31 8.1
AL589782-1|CAI17213.1| 713|Homo sapiens neuregulin 3 protein. 31 8.1
AL513204-1|CAH73645.1| 713|Homo sapiens neuregulin 3 protein. 31 8.1
AL391478-1|CAI15622.1| 713|Homo sapiens neuregulin 3 protein. 31 8.1
AL354749-1|CAH70641.1| 713|Homo sapiens neuregulin 3 protein. 31 8.1
AL136085-1|CAH71050.1| 713|Homo sapiens neuregulin 3 protein. 31 8.1
AL096706-1|CAI22410.1| 713|Homo sapiens neuregulin 3 protein. 31 8.1
>BC042195-1|AAH42195.2| 390|Homo sapiens malonyl CoA:ACP
acyltransferase (mitochondrial) protein.
Length = 390
Score = 92.7 bits (220), Expect = 2e-18
Identities = 46/94 (48%), Positives = 61/94 (64%), Gaps = 2/94 (2%)
Frame = +2
Query: 344 PSHTTVLLFPGQGSQHVGMGKKLMHLPPVRELYELASSIVGWDVARVCTEGPEXXLSR-- 517
P +VLLFPGQGSQ VGMG+ L++ P VRELY A ++G+D+ + GP+ L R
Sbjct: 59 PGQCSVLLFPGQGSQVVGMGRGLLNYPRVRELYAAARRVLGYDLLELSLHGPQETLDRTV 118
Query: 518 HCQIATLVTSLASLERLRXERPSALERVRTAAGF 619
HCQ A V SLA++E+L +PS +E AAGF
Sbjct: 119 HCQPAIFVASLAAVEKLHHLQPSVIENCVAAAGF 152
>BC030985-1|AAH30985.1| 180|Homo sapiens malonyl CoA:ACP
acyltransferase (mitochondrial) protein.
Length = 180
Score = 92.7 bits (220), Expect = 2e-18
Identities = 46/94 (48%), Positives = 61/94 (64%), Gaps = 2/94 (2%)
Frame = +2
Query: 344 PSHTTVLLFPGQGSQHVGMGKKLMHLPPVRELYELASSIVGWDVARVCTEGPEXXLSR-- 517
P +VLLFPGQGSQ VGMG+ L++ P VRELY A ++G+D+ + GP+ L R
Sbjct: 59 PGQCSVLLFPGQGSQVVGMGRGLLNYPRVRELYAAARRVLGYDLLELSLHGPQETLDRTV 118
Query: 518 HCQIATLVTSLASLERLRXERPSALERVRTAAGF 619
HCQ A V SLA++E+L +PS +E AAGF
Sbjct: 119 HCQPAIFVASLAAVEKLHHLQPSVIENCVAAAGF 152
>AL359403-1|CAB94790.1| 180|Homo sapiens hypothetical protein
protein.
Length = 180
Score = 92.7 bits (220), Expect = 2e-18
Identities = 46/94 (48%), Positives = 61/94 (64%), Gaps = 2/94 (2%)
Frame = +2
Query: 344 PSHTTVLLFPGQGSQHVGMGKKLMHLPPVRELYELASSIVGWDVARVCTEGPEXXLSR-- 517
P +VLLFPGQGSQ VGMG+ L++ P VRELY A ++G+D+ + GP+ L R
Sbjct: 59 PGQCSVLLFPGQGSQVVGMGRGLLNYPRVRELYAAARRVLGYDLLELSLHGPQETLDRTV 118
Query: 518 HCQIATLVTSLASLERLRXERPSALERVRTAAGF 619
HCQ A V SLA++E+L +PS +E AAGF
Sbjct: 119 HCQPAIFVASLAAVEKLHHLQPSVIENCVAAAGF 152
>AL359401-1|CAB94789.1| 390|Homo sapiens hypothetical protein
protein.
Length = 390
Score = 92.7 bits (220), Expect = 2e-18
Identities = 46/94 (48%), Positives = 61/94 (64%), Gaps = 2/94 (2%)
Frame = +2
Query: 344 PSHTTVLLFPGQGSQHVGMGKKLMHLPPVRELYELASSIVGWDVARVCTEGPEXXLSR-- 517
P +VLLFPGQGSQ VGMG+ L++ P VRELY A ++G+D+ + GP+ L R
Sbjct: 59 PGQCSVLLFPGQGSQVVGMGRGLLNYPRVRELYAAARRVLGYDLLELSLHGPQETLDRTV 118
Query: 518 HCQIATLVTSLASLERLRXERPSALERVRTAAGF 619
HCQ A V SLA++E+L +PS +E AAGF
Sbjct: 119 HCQPAIFVASLAAVEKLHHLQPSVIENCVAAAGF 152
>AL022237-3|CAA18261.1| 390|Homo sapiens protein ( Human DNA
sequence from clone CTB-1191B2 on chromosome
22q13.2-13.3.Contains the 3' end of a novel gene, the 5'
end of the gene for ).
Length = 390
Score = 92.7 bits (220), Expect = 2e-18
Identities = 46/94 (48%), Positives = 61/94 (64%), Gaps = 2/94 (2%)
Frame = +2
Query: 344 PSHTTVLLFPGQGSQHVGMGKKLMHLPPVRELYELASSIVGWDVARVCTEGPEXXLSR-- 517
P +VLLFPGQGSQ VGMG+ L++ P VRELY A ++G+D+ + GP+ L R
Sbjct: 59 PGQCSVLLFPGQGSQVVGMGRGLLNYPRVRELYAAARRVLGYDLLELSLHGPQETLDRTV 118
Query: 518 HCQIATLVTSLASLERLRXERPSALERVRTAAGF 619
HCQ A V SLA++E+L +PS +E AAGF
Sbjct: 119 HCQPAIFVASLAAVEKLHHLQPSVIENCVAAAGF 152
>BC039593-1|AAH39593.1| 913|Homo sapiens ubiquitin specific
peptidase 20 protein.
Length = 913
Score = 35.5 bits (78), Expect = 0.29
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -3
Query: 229 QQPSQRSTFTARTPSPTTSCHF*TSTYSCERVHH 128
Q PS RS+ RTP P H +S+ C VHH
Sbjct: 364 QPPSPRSSSPCRTPEPDNDAHLRSSSRPCSPVHH 397
>AY074877-1|AAL79676.1| 913|Homo sapiens pVHL-interacting
deubiquitinating enzyme 2 protein.
Length = 913
Score = 35.5 bits (78), Expect = 0.29
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -3
Query: 229 QQPSQRSTFTARTPSPTTSCHF*TSTYSCERVHH 128
Q PS RS+ RTP P H +S+ C VHH
Sbjct: 364 QPPSPRSSSPCRTPEPDNDAHLRSSSRPCSPVHH 397
>AL158207-6|CAC88170.1| 914|Homo sapiens ubiquitin specific
peptidase 20 protein.
Length = 914
Score = 35.5 bits (78), Expect = 0.29
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -3
Query: 229 QQPSQRSTFTARTPSPTTSCHF*TSTYSCERVHH 128
Q PS RS+ RTP P H +S+ C VHH
Sbjct: 365 QPPSPRSSSPCRTPEPDNDAHLRSSSRPCSPVHH 398
>AB023220-1|BAA76847.2| 917|Homo sapiens KIAA1003 protein protein.
Length = 917
Score = 35.5 bits (78), Expect = 0.29
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -3
Query: 229 QQPSQRSTFTARTPSPTTSCHF*TSTYSCERVHH 128
Q PS RS+ RTP P H +S+ C VHH
Sbjct: 368 QPPSPRSSSPCRTPEPDNDAHLRSSSRPCSPVHH 401
>DQ001411-1|AAY17216.1| 696|Homo sapiens neuregulin-3 protein.
Length = 696
Score = 30.7 bits (66), Expect = 8.1
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -3
Query: 220 SQRSTFTARTPSPTTSCHF*TSTYSCERVHH 128
S S+ T TP +TS F T+TYS ER H
Sbjct: 256 SSSSSATTTTPETSTSPKFHTTTYSTERSEH 286
>AL589782-1|CAI17213.1| 713|Homo sapiens neuregulin 3 protein.
Length = 713
Score = 30.7 bits (66), Expect = 8.1
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -3
Query: 220 SQRSTFTARTPSPTTSCHF*TSTYSCERVHH 128
S S+ T TP +TS F T+TYS ER H
Sbjct: 256 SSSSSATTTTPETSTSPKFHTTTYSTERSEH 286
>AL513204-1|CAH73645.1| 713|Homo sapiens neuregulin 3 protein.
Length = 713
Score = 30.7 bits (66), Expect = 8.1
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -3
Query: 220 SQRSTFTARTPSPTTSCHF*TSTYSCERVHH 128
S S+ T TP +TS F T+TYS ER H
Sbjct: 256 SSSSSATTTTPETSTSPKFHTTTYSTERSEH 286
>AL391478-1|CAI15622.1| 713|Homo sapiens neuregulin 3 protein.
Length = 713
Score = 30.7 bits (66), Expect = 8.1
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -3
Query: 220 SQRSTFTARTPSPTTSCHF*TSTYSCERVHH 128
S S+ T TP +TS F T+TYS ER H
Sbjct: 256 SSSSSATTTTPETSTSPKFHTTTYSTERSEH 286
>AL354749-1|CAH70641.1| 713|Homo sapiens neuregulin 3 protein.
Length = 713
Score = 30.7 bits (66), Expect = 8.1
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -3
Query: 220 SQRSTFTARTPSPTTSCHF*TSTYSCERVHH 128
S S+ T TP +TS F T+TYS ER H
Sbjct: 256 SSSSSATTTTPETSTSPKFHTTTYSTERSEH 286
>AL136085-1|CAH71050.1| 713|Homo sapiens neuregulin 3 protein.
Length = 713
Score = 30.7 bits (66), Expect = 8.1
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -3
Query: 220 SQRSTFTARTPSPTTSCHF*TSTYSCERVHH 128
S S+ T TP +TS F T+TYS ER H
Sbjct: 256 SSSSSATTTTPETSTSPKFHTTTYSTERSEH 286
>AL096706-1|CAI22410.1| 713|Homo sapiens neuregulin 3 protein.
Length = 713
Score = 30.7 bits (66), Expect = 8.1
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -3
Query: 220 SQRSTFTARTPSPTTSCHF*TSTYSCERVHH 128
S S+ T TP +TS F T+TYS ER H
Sbjct: 256 SSSSSATTTTPETSTSPKFHTTTYSTERSEH 286
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,998,585
Number of Sequences: 237096
Number of extensions: 1811424
Number of successful extensions: 7828
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 7603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7823
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12547615372
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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