Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_K16
         (951 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF040642-2|AAN73874.2|  411|Caenorhabditis elegans Hypothetical ...    86   3e-17
Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical pr...    29   6.5  
AC132211-4|AAN01432.2|  238|Caenorhabditis elegans Hypothetical ...    28   8.5  
AC024789-1|AAK85500.1|  238|Caenorhabditis elegans Hypothetical ...    28   8.5  

>AF040642-2|AAN73874.2|  411|Caenorhabditis elegans Hypothetical
           protein C50D2.9 protein.
          Length = 411

 Score = 86.2 bits (204), Expect = 3e-17
 Identities = 39/89 (43%), Positives = 61/89 (68%), Gaps = 2/89 (2%)
 Frame = +2

Query: 359 VLLFPGQGSQHVGMGKKLMHLPPVRELYELASSIVGWDVARVCTEGPEXXLSR--HCQIA 532
           VLLFPGQG+Q VGMG+K+M +P  R +++ AS ++G+D+ +VC +GP+  L +  +CQ A
Sbjct: 95  VLLFPGQGAQFVGMGQKVMDIPAARRVFDEASEVLGYDMLKVCQDGPKQKLEQTLYCQPA 154

Query: 533 TLVTSLASLERLRXERPSALERVRTAAGF 619
            + +S+A+ E L+   PS  E +   AGF
Sbjct: 155 IVTSSIAAFEALKASDPSIEENLTDTAGF 183


>Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical
           protein F32H2.5 protein.
          Length = 2586

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 6/81 (7%)
 Frame = +2

Query: 329 KARVEPSHTTVLLFPGQGSQHVGMGKKLMHLPPVRELYELASSIV---GWDV-ARVCTEG 496
           K  +  +     ++ G GSQ  GM  KLM +P   +    +S  +   G DV   +C   
Sbjct: 495 KVPITEARPIYFIYSGMGSQWPGMAIKLMKIPMFDDSLRASSKTLEEFGLDVYGMLCNPD 554

Query: 497 PEXXLSR--HCQIATLVTSLA 553
           PE   +   +C +A     +A
Sbjct: 555 PEQYSNNTMNCMLAITAIQIA 575


>AC132211-4|AAN01432.2|  238|Caenorhabditis elegans Hypothetical
           protein Y108F1.1 protein.
          Length = 238

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
 Frame = +2

Query: 407 KLMHLPPV--RELYELASSIVGWDVARVCTEGPEXXLSRHCQIATLVTSLASLERL 568
           KL H P    + L  L  S  G D+  VC E      S  C + T+     +L+R+
Sbjct: 124 KLDHAPQEYSQRLAVLTPSFTGADIMNVCNESAIRAASNKCHVVTIKDMEYALDRV 179


>AC024789-1|AAK85500.1|  238|Caenorhabditis elegans Hypothetical
           protein Y47C4A.1 protein.
          Length = 238

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
 Frame = +2

Query: 407 KLMHLPPV--RELYELASSIVGWDVARVCTEGPEXXLSRHCQIATLVTSLASLERL 568
           KL H P    + L  L  S  G D+  VC E      S  C + T+     +L+R+
Sbjct: 124 KLDHAPQEYSQRLAVLTPSFTGADIMNVCNESAIRAASNKCHVVTIKDMEYALDRV 179


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,823,440
Number of Sequences: 27780
Number of extensions: 254596
Number of successful extensions: 643
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 642
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2465154230
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)