Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_K15
         (912 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1105 - 30942735-30942791,30943116-30943466,30943670-309437...    31   0.96 
06_03_0833 - 25196091-25196372,25196464-25196565,25196640-251968...    31   1.7  
04_01_0154 - 1775693-1775942,1776834-1777588                           29   5.1  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   9.0  
06_03_0218 + 18219956-18220555                                         28   9.0  
03_06_0149 - 31987183-31987630,31987813-31987874                       28   9.0  
03_04_0061 - 16949038-16950006                                         28   9.0  

>04_04_1105 -
           30942735-30942791,30943116-30943466,30943670-30943762,
           30943869-30944072,30944155-30944399,30945019-30945877,
           30946070-30946936,30947113-30947562
          Length = 1041

 Score = 31.5 bits (68), Expect = 0.96
 Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 5/40 (12%)
 Frame = +2

Query: 671 RLPDTCPPFSLREAWRFLIA-----HAVGISVRCRSFRSK 775
           RL D C P  L+E WRFL+A      A   S RC++ R+K
Sbjct: 849 RLAD-CDPRVLKEQWRFLVAFWNTEEAQAASARCKASRAK 887


>06_03_0833 -
           25196091-25196372,25196464-25196565,25196640-25196838,
           25196978-25197278,25197471-25197645,25197842-25198012,
           25198207-25198239
          Length = 420

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 16/53 (30%), Positives = 21/53 (39%)
 Frame = +2

Query: 521 CWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLP 679
           CWR  +        T  D Q    +    +KD    P + PSC L+F P   P
Sbjct: 283 CWRHFLNQDFAMFATAGDDQWNPEDHLPSFKDDSLIPYDVPSCHLIFIPLLQP 335


>04_01_0154 - 1775693-1775942,1776834-1777588
          Length = 334

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 29/89 (32%), Positives = 36/89 (40%), Gaps = 3/89 (3%)
 Frame = -3

Query: 772 GAERPTPN*DTYSVSYEKAPRFPKGERRTG---IR*AAGSEQESARGSFQGETPGIFIVL 602
           GA+   P+ D  S   + APR P  ER  G    R AA S +   RG   G  P      
Sbjct: 55  GADAVAPDADPASPVEDLAPRRPDRERGGGGAARRRAASSSRRRRRGKSVG-GPSSRRRR 113

Query: 601 SGFATSDLSVDFCDARQGGGAYGKTPATR 515
            G     L +    ARQ GGA  +  + R
Sbjct: 114 RGKTAGGLKLPTTAARQDGGATRRNSSRR 142


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +1

Query: 301 NESAN---ARGEAVCVLGALPLPRSLTRCAR 384
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>06_03_0218 + 18219956-18220555
          Length = 199

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = -1

Query: 708 SRREKGGQVSG--KRQGRNRRAHEGASRGKRLVS 613
           +RRE+  + +G  KR+GR R    G  RGKR  S
Sbjct: 106 ARRERRLEAAGAEKREGRRRGGSSGGLRGKRRAS 139


>03_06_0149 - 31987183-31987630,31987813-31987874
          Length = 169

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -1

Query: 729 AMRKRHASRREKGGQVSGKRQGRNRRAHEGASRG 628
           A+ + H   R +   +  +R+GR R AHEG   G
Sbjct: 76  AVARGHGLERLQEAGIEAERRGRRRNAHEGIKIG 109


>03_04_0061 - 16949038-16950006
          Length = 322

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +3

Query: 603 RTIKIPGVSPWKLPRALSCSDPAAYRIPVRLSPFGKRGA 719
           RT+K PG+   ++PRA+  + P  Y   VR +   +R A
Sbjct: 255 RTMKGPGLGGARVPRAVFRASPRRYYAAVRTARKARRSA 293


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,447,283
Number of Sequences: 37544
Number of extensions: 545435
Number of successful extensions: 1641
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1576
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1636
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)