Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_K10
(1000 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X64624-1|CAA45907.1| 331|Homo sapiens RDC-1 protein. 33 1.6
U19927-1|AAC50140.1| 502|Homo sapiens WAS protein. 33 1.6
U12707-1|AAA62663.1| 502|Homo sapiens Wiskott-Aldrich syndrome ... 33 1.6
BC012738-1|AAH12738.1| 502|Homo sapiens Wiskott-Aldrich syndrom... 33 1.6
BC002961-1|AAH02961.1| 514|Homo sapiens WAS protein protein. 33 1.6
AF115549-1|AAD26691.1| 502|Homo sapiens Wiskott-Aldrich Syndrom... 33 1.6
AL445209-3|CAI15184.1| 419|Homo sapiens POU domain, class 4, tr... 33 2.1
Y18198-1|CAB38253.1| 485|Homo sapiens ONECUT-2 transcription fa... 32 2.8
U10063-1|AAA57161.1| 423|Homo sapiens POU domain factor protein. 32 2.8
L20433-1|AAA65605.1| 420|Homo sapiens octamer binding transcrip... 32 2.8
X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage f... 32 3.7
X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein. 32 3.7
BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein. 32 3.7
AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and polyadenyl... 32 3.7
BC073988-1|AAH73988.1| 682|Homo sapiens FMNL1 protein protein. 31 6.5
BC051877-1|AAH51877.1| 557|Homo sapiens ariadne homolog, ubiqui... 31 6.5
AY278319-1|AAP32476.1| 1100|Homo sapiens leukocyte formin protein. 31 6.5
AJ243190-1|CAB45870.1| 557|Homo sapiens UbcH 7-binding protein ... 31 6.5
AF432213-1|AAL99920.1| 991|Homo sapiens CLL-associated antigen ... 31 6.5
AF072832-1|AAD28088.1| 557|Homo sapiens UbcH 7-binding protein ... 31 6.5
>X64624-1|CAA45907.1| 331|Homo sapiens RDC-1 protein.
Length = 331
Score = 33.1 bits (72), Expect = 1.6
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = +2
Query: 590 GGXPGGXGG*XGGXGGGGP 646
GG PGG GG G GGGGP
Sbjct: 75 GGGPGGGGGGAAGGGGGGP 93
>U19927-1|AAC50140.1| 502|Homo sapiens WAS protein.
Length = 502
Score = 33.1 bits (72), Expect = 1.6
Identities = 22/74 (29%), Positives = 26/74 (35%), Gaps = 1/74 (1%)
Frame = -3
Query: 398 TXKGXPPGGXXXFXPX*NXAPNKXNTLPRAXPNXXXP-FPYPVXGXXXPXXTLXGXAPPX 222
T +G PP G P A + LP P P P P P + G APP
Sbjct: 355 TPRGPPPPGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPPPPPPSSGNGPAPPP 414
Query: 221 XPXPPPXGGXXSPG 180
P G +PG
Sbjct: 415 LPPALVPAGGLAPG 428
>U12707-1|AAA62663.1| 502|Homo sapiens Wiskott-Aldrich syndrome
protein protein.
Length = 502
Score = 33.1 bits (72), Expect = 1.6
Identities = 22/74 (29%), Positives = 26/74 (35%), Gaps = 1/74 (1%)
Frame = -3
Query: 398 TXKGXPPGGXXXFXPX*NXAPNKXNTLPRAXPNXXXP-FPYPVXGXXXPXXTLXGXAPPX 222
T +G PP G P A + LP P P P P P + G APP
Sbjct: 355 TPRGPPPPGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPPPPPPSSGNGPAPPP 414
Query: 221 XPXPPPXGGXXSPG 180
P G +PG
Sbjct: 415 LPPALVPAGGLAPG 428
>BC012738-1|AAH12738.1| 502|Homo sapiens Wiskott-Aldrich syndrome
(eczema-thrombocytopenia) protein.
Length = 502
Score = 33.1 bits (72), Expect = 1.6
Identities = 22/74 (29%), Positives = 26/74 (35%), Gaps = 1/74 (1%)
Frame = -3
Query: 398 TXKGXPPGGXXXFXPX*NXAPNKXNTLPRAXPNXXXP-FPYPVXGXXXPXXTLXGXAPPX 222
T +G PP G P A + LP P P P P P + G APP
Sbjct: 355 TPRGPPPPGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPPPPPPSSGNGPAPPP 414
Query: 221 XPXPPPXGGXXSPG 180
P G +PG
Sbjct: 415 LPPALVPAGGLAPG 428
>BC002961-1|AAH02961.1| 514|Homo sapiens WAS protein protein.
Length = 514
Score = 33.1 bits (72), Expect = 1.6
Identities = 22/74 (29%), Positives = 26/74 (35%), Gaps = 1/74 (1%)
Frame = -3
Query: 398 TXKGXPPGGXXXFXPX*NXAPNKXNTLPRAXPNXXXP-FPYPVXGXXXPXXTLXGXAPPX 222
T +G PP G P A + LP P P P P P + G APP
Sbjct: 367 TPRGPPPPGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPPPPPPSSGNGPAPPP 426
Query: 221 XPXPPPXGGXXSPG 180
P G +PG
Sbjct: 427 LPPALVPAGGLAPG 440
>AF115549-1|AAD26691.1| 502|Homo sapiens Wiskott-Aldrich Syndrome
protein protein.
Length = 502
Score = 33.1 bits (72), Expect = 1.6
Identities = 22/74 (29%), Positives = 26/74 (35%), Gaps = 1/74 (1%)
Frame = -3
Query: 398 TXKGXPPGGXXXFXPX*NXAPNKXNTLPRAXPNXXXP-FPYPVXGXXXPXXTLXGXAPPX 222
T +G PP G P A + LP P P P P P + G APP
Sbjct: 355 TPRGPPPPGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPPPPPPSSGNGPAPPP 414
Query: 221 XPXPPPXGGXXSPG 180
P G +PG
Sbjct: 415 LPPALVPAGGLAPG 428
>AL445209-3|CAI15184.1| 419|Homo sapiens POU domain, class 4,
transcription factor 1 protein.
Length = 419
Score = 32.7 bits (71), Expect = 2.1
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = +2
Query: 590 GGXPGGXGG*XGGXGGGG 643
GG PGG GG GG GGGG
Sbjct: 150 GGGPGGGGGPGGGPGGGG 167
Score = 32.3 bits (70), Expect = 2.8
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = +2
Query: 590 GGXPGGXGG*XGGXGGGGP 646
GG PGG GG G GGGGP
Sbjct: 160 GGGPGGGGGGGPGGGGGGP 178
>Y18198-1|CAB38253.1| 485|Homo sapiens ONECUT-2 transcription
factor (OC-2) protein.
Length = 485
Score = 32.3 bits (70), Expect = 2.8
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = +2
Query: 590 GGXPGGXGG*XGGXGGGGP 646
GG GG GG GG GGGGP
Sbjct: 18 GGGSGGGGGGGGGGGGGGP 36
>U10063-1|AAA57161.1| 423|Homo sapiens POU domain factor protein.
Length = 423
Score = 32.3 bits (70), Expect = 2.8
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = +2
Query: 590 GGXPGGXGG*XGGXGGGGP 646
GG PGG GG G GGGGP
Sbjct: 164 GGGPGGGGGGGPGGGGGGP 182
>L20433-1|AAA65605.1| 420|Homo sapiens octamer binding
transcription factor 1 protein.
Length = 420
Score = 32.3 bits (70), Expect = 2.8
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = +2
Query: 590 GGXPGGXGG*XGGXGGGGP 646
GG PGG GG G GGGGP
Sbjct: 161 GGGPGGGGGGGPGGGGGGP 179
>X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage
factor I 68 kDa subunit protein.
Length = 551
Score = 31.9 bits (69), Expect = 3.7
Identities = 22/72 (30%), Positives = 25/72 (34%), Gaps = 2/72 (2%)
Frame = -3
Query: 389 GXPPGGXXXFXPX*NXAPNKXNTLPRAXPNXXXPFPYPVXGXXXPXXT--LXGXAPPXXP 216
G PP G P PN+ + P PF P G P + G PP P
Sbjct: 251 GPPPPGQV-LPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGP 309
Query: 215 XPPPXGGXXSPG 180
PP G PG
Sbjct: 310 PPPQQGPPPPPG 321
>X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein.
Length = 551
Score = 31.9 bits (69), Expect = 3.7
Identities = 22/72 (30%), Positives = 25/72 (34%), Gaps = 2/72 (2%)
Frame = -3
Query: 389 GXPPGGXXXFXPX*NXAPNKXNTLPRAXPNXXXPFPYPVXGXXXPXXT--LXGXAPPXXP 216
G PP G P PN+ + P PF P G P + G PP P
Sbjct: 251 GPPPPGQV-LPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGP 309
Query: 215 XPPPXGGXXSPG 180
PP G PG
Sbjct: 310 PPPQQGPPPPPG 321
>BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein.
Length = 588
Score = 31.9 bits (69), Expect = 3.7
Identities = 22/72 (30%), Positives = 25/72 (34%), Gaps = 2/72 (2%)
Frame = -3
Query: 389 GXPPGGXXXFXPX*NXAPNKXNTLPRAXPNXXXPFPYPVXGXXXPXXT--LXGXAPPXXP 216
G PP G P PN+ + P PF P G P + G PP P
Sbjct: 288 GPPPPGQV-LPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGP 346
Query: 215 XPPPXGGXXSPG 180
PP G PG
Sbjct: 347 PPPQQGPPPPPG 358
>AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and
polyadenylation specific factor 6, 68 kD subunit variant
protein.
Length = 551
Score = 31.9 bits (69), Expect = 3.7
Identities = 22/72 (30%), Positives = 25/72 (34%), Gaps = 2/72 (2%)
Frame = -3
Query: 389 GXPPGGXXXFXPX*NXAPNKXNTLPRAXPNXXXPFPYPVXGXXXPXXT--LXGXAPPXXP 216
G PP G P PN+ + P PF P G P + G PP P
Sbjct: 251 GPPPPGQV-LPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGP 309
Query: 215 XPPPXGGXXSPG 180
PP G PG
Sbjct: 310 PPPQQGPPPPPG 321
>BC073988-1|AAH73988.1| 682|Homo sapiens FMNL1 protein protein.
Length = 682
Score = 31.1 bits (67), Expect = 6.5
Identities = 20/66 (30%), Positives = 21/66 (31%)
Frame = -3
Query: 380 PGGXXXFXPX*NXAPNKXNTLPRAXPNXXXPFPYPVXGXXXPXXTLXGXAPPXXPXPPPX 201
PG P P+ P A P P P P L G PP P PPP
Sbjct: 120 PGAAPPPPPPLPGLPSPQEAPPSAPPQAP---PLPGSPEPPPAPPLPGDLPPPPPPPPPP 176
Query: 200 GGXXSP 183
G P
Sbjct: 177 PGTDGP 182
>BC051877-1|AAH51877.1| 557|Homo sapiens ariadne homolog,
ubiquitin-conjugating enzyme E2 binding protein, 1
(Drosophila protein.
Length = 557
Score = 31.1 bits (67), Expect = 6.5
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +2
Query: 599 PGGXGG*XGGXGGGGP 646
PGG GG GG GGGGP
Sbjct: 76 PGGGGGGGGGGGGGGP 91
>AY278319-1|AAP32476.1| 1100|Homo sapiens leukocyte formin protein.
Length = 1100
Score = 31.1 bits (67), Expect = 6.5
Identities = 20/66 (30%), Positives = 21/66 (31%)
Frame = -3
Query: 380 PGGXXXFXPX*NXAPNKXNTLPRAXPNXXXPFPYPVXGXXXPXXTLXGXAPPXXPXPPPX 201
PG P P+ P A P P P P L G PP P PPP
Sbjct: 538 PGAAPPPPPPLPGLPSPQEAPPSAPPQAP---PLPGSPEPPPAPPLPGDLPPPPPPPPPP 594
Query: 200 GGXXSP 183
G P
Sbjct: 595 PGTDGP 600
>AJ243190-1|CAB45870.1| 557|Homo sapiens UbcH 7-binding protein
protein.
Length = 557
Score = 31.1 bits (67), Expect = 6.5
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +2
Query: 599 PGGXGG*XGGXGGGGP 646
PGG GG GG GGGGP
Sbjct: 76 PGGGGGGGGGGGGGGP 91
>AF432213-1|AAL99920.1| 991|Homo sapiens CLL-associated antigen
KW-13 protein.
Length = 991
Score = 31.1 bits (67), Expect = 6.5
Identities = 20/66 (30%), Positives = 21/66 (31%)
Frame = -3
Query: 380 PGGXXXFXPX*NXAPNKXNTLPRAXPNXXXPFPYPVXGXXXPXXTLXGXAPPXXPXPPPX 201
PG P P+ P A P P P P L G PP P PPP
Sbjct: 429 PGAAPPPPPPLPGLPSPQEAPPSAPPQAP---PLPGSPEPPPAPPLPGDLPPPPPPPPPP 485
Query: 200 GGXXSP 183
G P
Sbjct: 486 PGTDGP 491
>AF072832-1|AAD28088.1| 557|Homo sapiens UbcH 7-binding protein
protein.
Length = 557
Score = 31.1 bits (67), Expect = 6.5
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +2
Query: 599 PGGXGG*XGGXGGGGP 646
PGG GG GG GGGGP
Sbjct: 76 PGGGGGGGGGGGGGGP 91
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,258,142
Number of Sequences: 237096
Number of extensions: 909713
Number of successful extensions: 5301
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4887
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 13323281566
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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