Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_K09
         (946 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    35   0.004
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            31   0.067

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 34.7 bits (76), Expect = 0.004
 Identities = 29/104 (27%), Positives = 35/104 (33%), Gaps = 4/104 (3%)
 Frame = +1

Query: 442 PGPPPXGXNGXILRXXPHGPPXPXPPXPGDTXARXXXAPXPXGXXXPXXXAGXPPXKPKG 621
           PGP      G +       P  P PP PG    +    P P     P    G  P    G
Sbjct: 187 PGPQMMRPPGNVGPPRTGTPTQPQPPRPGGMYPQPPGVPMP---MRPQMPPGAVPGMQPG 243

Query: 622 XXPXPKT---XXXPPQXGXTPXXPXPGXPPPQXGXPKXK-TPXN 741
             P P +      PP  G     P P  PP   G P+ + +P N
Sbjct: 244 MQPRPPSAQGMQRPPMMG----QPPPIRPPNPMGGPRPQISPQN 283



 Score = 27.9 bits (59), Expect = 0.47
 Identities = 17/77 (22%), Positives = 21/77 (27%)
 Frame = +1

Query: 490 PHGPPXPXPPXPGDTXARXXXAPXPXGXXXPXXXAGXPPXKPKGXXPXPKTXXXPPQXGX 669
           P  P  P    PG         P   G   P      PP +P      P+    P     
Sbjct: 227 PMRPQMPPGAVPGMQPGMQPRPPSAQGMQRPPMMGQPPPIRPPNPMGGPRPQISPQNSNL 286

Query: 670 TPXXPXPGXPPPQXGXP 720
           +   P     PP+   P
Sbjct: 287 SGGMPSGMVGPPRPPMP 303


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 30.7 bits (66), Expect = 0.067
 Identities = 26/90 (28%), Positives = 27/90 (30%), Gaps = 3/90 (3%)
 Frame = +1

Query: 445 GPPPX-GXNGXILRXXPHGPPXPXPPXPGDTXARXXXAPXPXGXXXPXXXAGXPPXK--P 615
           GPP   G +G  L   P GPP P PP            P P            P     P
Sbjct: 511 GPPHGAGYDGRDLTGGPLGPPPPPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFP 570

Query: 616 KGXXPXPKTXXXPPQXGXTPXXPXPGXPPP 705
            G    P     P      P  P P  PPP
Sbjct: 571 AGFPNLPNAQPPP-----APPPPPPMGPPP 595


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.317    0.149    0.523 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 492,353
Number of Sequences: 2352
Number of extensions: 7156
Number of successful extensions: 13
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 103362750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)