Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_K08
(938 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 103 7e-21
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 79 2e-13
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 72 2e-11
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 64 4e-09
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 58 3e-07
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 50 6e-05
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 44 0.004
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 44 0.006
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 43 0.010
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 43 0.013
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 42 0.023
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.091
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 35 2.6
UniRef50_Q5LPI5 Cluster: CobN; n=10; Alphaproteobacteria|Rep: Co... 34 6.0
UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 34 6.0
UniRef50_Q40380 Cluster: Arabinogalactan-protein precursor; n=4;... 34 6.0
UniRef50_A4S9D9 Cluster: Predicted protein; n=1; Ostreococcus lu... 34 6.0
UniRef50_Q7RZM1 Cluster: Putative uncharacterized protein NCU003... 34 6.0
UniRef50_UPI0000DA21FE Cluster: PREDICTED: similar to nuclease s... 33 7.9
UniRef50_Q0RSW8 Cluster: Putative uncharacterized protein; n=1; ... 33 7.9
UniRef50_A6LZB2 Cluster: FMN-binding domain protein precursor; n... 33 7.9
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 103 bits (247), Expect = 7e-21
Identities = 65/124 (52%), Positives = 74/124 (59%), Gaps = 3/124 (2%)
Frame = +2
Query: 317 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQNQGITQERTCEQKASKRP 496
R +C G +PLPRSLTR ARSFGCGERY+LT G E T + SK
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDT-RKTLSKEE 76
Query: 497 GTVKRPRCWRFSIGSAPLTSITKIDAQVRXGETRQDYKDTRRFP---PGSSLVRLSCSDP 667
RPR RFSIGSAPLTSI K DAQ+ GETRQDYKD RRFP P +L+ L P
Sbjct: 77 ---IRPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLPFGLP 133
Query: 668 AAYR 679
++R
Sbjct: 134 VSFR 137
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 79.0 bits (186), Expect = 2e-13
Identities = 47/81 (58%), Positives = 51/81 (62%), Gaps = 3/81 (3%)
Frame = +2
Query: 485 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRXGETRQDYKDTRRFP---PGSSLVRLS 655
SK+ T R RFSIGSAPLTSITKIDAQVR GETRQDYKDTRRFP P +L+
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61
Query: 656 CSDPAAYRIPVRLSPFGKRGA 718
C R+P PF R A
Sbjct: 62 C------RLPDTCPPFSLREA 76
Score = 62.5 bits (145), Expect = 1e-08
Identities = 25/31 (80%), Positives = 26/31 (83%)
Frame = +1
Query: 628 PWKLPRAPLLFRPCRLPDTCPPFSLREAWRF 720
P + P LLFRPCRLPDTCPPFSLREAWRF
Sbjct: 49 PLEAPSCALLFRPCRLPDTCPPFSLREAWRF 79
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 72.1 bits (169), Expect = 2e-11
Identities = 34/42 (80%), Positives = 36/42 (85%)
Frame = +2
Query: 503 VKRPRCWRFSIGSAPLTSITKIDAQVRXGETRQDYKDTRRFP 628
V+ PR RFSIGSAPLTSITK DAQ+ GETRQDYKDTRRFP
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFP 85
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 64.5 bits (150), Expect = 4e-09
Identities = 30/38 (78%), Positives = 30/38 (78%)
Frame = -2
Query: 493 PFAGLLLTCSFLRYPLILWITVLPPLSELIPLAAAERP 380
P LLTCSF YPLILWITVLPPLSEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 58.0 bits (134), Expect = 3e-07
Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +2
Query: 293 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 460
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 50.4 bits (115), Expect = 6e-05
Identities = 23/23 (100%), Positives = 23/23 (100%)
Frame = +3
Query: 651 SPVPTLPLTGYLSAFLPSGSVAL 719
SPVPTLPLTGYLSAFLPSGSVAL
Sbjct: 3 SPVPTLPLTGYLSAFLPSGSVAL 25
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 44.4 bits (100), Expect = 0.004
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +1
Query: 412 HSKAVIRLSTESGDNAGKNM 471
HSKAVIRLSTESGDNAGKNM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 44.0 bits (99), Expect = 0.006
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +2
Query: 95 DPDMIRYIDEFGQTTTKMQ 151
DPDMIRYIDEFGQTTT+MQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 43.2 bits (97), Expect = 0.010
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +2
Query: 392 CGERYQLTQRR*YG--YPQNQGITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITK 565
C R Q R G +P+N I +R + + + P T F S PLT+ITK
Sbjct: 22 CCHRQQCLLNRNLGLDHPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITK 81
Query: 566 IDAQVRXGETRQDYKDTRRFP 628
I Q + +T+ +YK T FP
Sbjct: 82 IYPQFKNTQTQHNYKYTTPFP 102
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 42.7 bits (96), Expect = 0.013
Identities = 26/54 (48%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = -1
Query: 746 RXTXTXGYEKR-HASRREKGGQVSGKRQGRNRRGARGSFQGGNAWYLYSPVGFR 588
R T + YEK + +K QVSGKRQGRNRR G+ G + SPVGFR
Sbjct: 43 RDTSSVSYEKAPRFPKGKKAEQVSGKRQGRNRRAHEGA-AGEKSPASLSPVGFR 95
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 41.9 bits (94), Expect = 0.023
Identities = 22/41 (53%), Positives = 26/41 (63%)
Frame = +3
Query: 219 INKLTTTIAFILCFRFRXEVWEVFSALMNRPTRGERRFAYW 341
+++LT L RF V +ALMNRPTRGERRFAYW
Sbjct: 1 MSELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.091
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3
Query: 363 ERGSGRAPNTQTASPRALADSLMQ 292
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 35.1 bits (77), Expect = 2.6
Identities = 25/51 (49%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 578 VRXGETRQDYKDTRRFPPGSSLVRLSCSDPAAYRIPV-RLSPFGKRGASHS 727
VR GETRQD K L LSCS+PA RIPV S G SHS
Sbjct: 23 VRSGETRQDLKIITVSDESLPLA-LSCSNPAVSRIPVPPFSLAGSVALSHS 72
>UniRef50_Q5LPI5 Cluster: CobN; n=10; Alphaproteobacteria|Rep: CobN
- Silicibacter pomeroyi
Length = 1097
Score = 33.9 bits (74), Expect = 6.0
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = -2
Query: 661 GTGEAHEGASRGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATR 512
G E G++P +VLS F+ SDL +GGGA GK P R
Sbjct: 10 GLEETETPTDLGQSPADLVVLS-FSDSDLGAFAAGWHRGGGAVGKLPTLR 58
>UniRef50_Q12GC2 Cluster: Putative uncharacterized protein
precursor; n=2; Polaromonas|Rep: Putative
uncharacterized protein precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 268
Score = 33.9 bits (74), Expect = 6.0
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -2
Query: 502 GSWPFAGLLLTCSFLRYP---LILWITVLPPLSELIPLAAAERP 380
G W +G L L++ LI+W+ LPPL++ IP+A+ + P
Sbjct: 158 GVWLSSGNALPWGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201
>UniRef50_Q40380 Cluster: Arabinogalactan-protein precursor; n=4;
core eudicotyledons|Rep: Arabinogalactan-protein
precursor - Nicotiana alata (Winged tobacco) (Persian
tobacco)
Length = 132
Score = 33.9 bits (74), Expect = 6.0
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Frame = +3
Query: 555 ASQKSTLKSXVAKPDRTIKIPGVSPLEAPSCA-----SPV--PTLPLTGYLSAFLPSGSV 713
AS K++ + VA P + P +P ++PS A SP+ P P T AF PSG V
Sbjct: 30 ASPKASPVAPVASPPTAVVTPVSAPSQSPSTAASPSESPLASPPAPPTADTPAFAPSGGV 89
Query: 714 AL 719
AL
Sbjct: 90 AL 91
>UniRef50_A4S9D9 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 33.9 bits (74), Expect = 6.0
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = -2
Query: 697 RKADRYPVSGRVGTGEAHEGASRGETPGIFIVLSGFATSDLSV--DFCDA 554
++ ++YP + + G H +RG+ G F+V G T LSV CDA
Sbjct: 23 QRLEQYPTNAALAAGVLHGARARGDVEGKFVVDLGCGTGILSVAATLCDA 72
>UniRef50_Q7RZM1 Cluster: Putative uncharacterized protein
NCU00344.1; n=1; Neurospora crassa|Rep: Putative
uncharacterized protein NCU00344.1 - Neurospora crassa
Length = 874
Score = 33.9 bits (74), Expect = 6.0
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 7/58 (12%)
Frame = +3
Query: 555 ASQKSTLKSXVA-KPDR---TIKIPGVSPLEAPSCASPVPTLP---LTGYLSAFLPSG 707
A++ +LK+ VA +P T ++P + P++ S + PVP+LP L G LS LP G
Sbjct: 115 AAELQSLKNTVAPRPSLGGLTTELPPIRPVQYSSASPPVPSLPQLTLPGTLSGTLPGG 172
>UniRef50_UPI0000DA21FE Cluster: PREDICTED: similar to nuclease
sensitive element binding protein 1; n=1; Rattus
norvegicus|Rep: PREDICTED: similar to nuclease sensitive
element binding protein 1 - Rattus norvegicus
Length = 120
Score = 33.5 bits (73), Expect = 7.9
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Frame = +2
Query: 365 LTRCARSFGCGERYQLTQRR*YGYPQNQGITQERTCEQKASKRPGTVK--RPRCWRFSIG 538
+T A + G GE+ + ++ Y + + + + E+ A KR +K RP+
Sbjct: 20 VTEGADNQGAGEQSRPVRKNMYDHDSAGALLAKDSQERMAMKRTKKIKEMRPKVSSHLNV 79
Query: 539 SAPLTSITKIDAQVRXGETRQDYKDTRRFPP 631
S TSIT DAQ QD K+T+ P
Sbjct: 80 SITTTSITNADAQRALPREPQDGKETKAADP 110
>UniRef50_Q0RSW8 Cluster: Putative uncharacterized protein; n=1;
Frankia alni ACN14a|Rep: Putative uncharacterized
protein - Frankia alni (strain ACN14a)
Length = 382
Score = 33.5 bits (73), Expect = 7.9
Identities = 21/71 (29%), Positives = 33/71 (46%)
Frame = +2
Query: 473 EQKASKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRXGETRQDYKDTRRFPPGSSLVRL 652
+ AS+ PG+V R + + S L + D R G + ++DTR PP +S
Sbjct: 45 DNPASRHPGSV---RAMQLIVASHELLEKWRDDYDARTGRLSRPHRDTRATPPAASTPPA 101
Query: 653 SCSDPAAYRIP 685
+ + PAA P
Sbjct: 102 TPTAPAAPTSP 112
>UniRef50_A6LZB2 Cluster: FMN-binding domain protein precursor; n=1;
Clostridium beijerinckii NCIMB 8052|Rep: FMN-binding
domain protein precursor - Clostridium beijerinckii
NCIMB 8052
Length = 364
Score = 33.5 bits (73), Expect = 7.9
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 137 TTKMQ*KKCFICEICD-AIALFVTIISCNKQVNNNNCIH 250
T K C C+ CD A + + I +CNK VN+ NCI+
Sbjct: 167 TIKRDANSCINCKRCDKACDMNIKISTCNKTVNSLNCIN 205
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 714,038,003
Number of Sequences: 1657284
Number of extensions: 14268633
Number of successful extensions: 44683
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 42186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44610
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 86141029997
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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