Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_K06
(958 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82059-10|CAB04878.2| 589|Caenorhabditis elegans Hypothetical p... 53 3e-07
AF067219-16|AAC17022.1| 531|Caenorhabditis elegans Hypothetical... 50 2e-06
Z82059-11|CAC42351.2| 591|Caenorhabditis elegans Hypothetical p... 49 4e-06
DQ338465-1|ABC67522.1| 690|Caenorhabditis elegans KEL-8 protein. 45 7e-05
AF067946-5|AAC17684.4| 690|Caenorhabditis elegans Hypothetical ... 45 7e-05
Z79759-4|CAB02139.2| 395|Caenorhabditis elegans Hypothetical pr... 43 3e-04
Z69902-7|CAA93769.1| 618|Caenorhabditis elegans Hypothetical pr... 43 3e-04
U67737-1|AAC63596.1| 395|Caenorhabditis elegans MEL-26 protein. 43 3e-04
AB023424-1|BAA82800.1| 618|Caenorhabditis elegans kel-1 protein. 43 3e-04
U13072-5|AAK31400.1| 390|Caenorhabditis elegans Hypothetical pr... 42 5e-04
U13072-4|AAL00851.1| 397|Caenorhabditis elegans Hypothetical pr... 42 5e-04
AL032663-3|CAA21761.1| 320|Caenorhabditis elegans Hypothetical ... 42 7e-04
AF519108-1|AAM74222.1| 909|Caenorhabditis elegans EOR-1 protein. 42 7e-04
AF502568-1|AAM74151.1| 909|Caenorhabditis elegans EOR-1 protein. 42 7e-04
AF100669-8|AAK39268.1| 909|Caenorhabditis elegans Egl-1 suppres... 42 7e-04
Z77660-9|CAB01179.1| 602|Caenorhabditis elegans Hypothetical pr... 39 0.006
L14433-2|AAA27978.1| 410|Caenorhabditis elegans Hypothetical pr... 36 0.043
Z68216-4|CAA92463.2| 565|Caenorhabditis elegans Hypothetical pr... 31 1.2
U80839-11|AAB37912.2| 261|Caenorhabditis elegans Hypothetical p... 31 1.6
Z66512-2|CAA91323.1| 387|Caenorhabditis elegans Hypothetical pr... 30 2.8
U80953-3|AAB52554.1| 350|Caenorhabditis elegans Abnormal dauer ... 30 2.8
U72884-1|AAC47389.1| 350|Caenorhabditis elegans DAF-7 protein. 30 2.8
U72883-1|AAC47390.1| 350|Caenorhabditis elegans dauer larva dev... 30 2.8
U56965-9|AAB52662.2| 265|Caenorhabditis elegans Hypothetical pr... 30 2.8
AC025723-13|AAK29939.1| 286|Caenorhabditis elegans Hypothetical... 29 3.7
AL132865-13|CAB60609.1| 496|Caenorhabditis elegans Hypothetical... 28 8.6
>Z82059-10|CAB04878.2| 589|Caenorhabditis elegans Hypothetical
protein T27E9.4a protein.
Length = 589
Score = 53.2 bits (122), Expect = 3e-07
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Frame = +1
Query: 268 FHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMNPTQHPI--VFLKDVSHS 441
F+ L S+ L DV L E R L AHK++L+ PYF+ MF ++ + + + ++D+++
Sbjct: 41 FNELRSKCQLCDVALLVENRKLSAHKVILAATIPYFRGMFTLDLMEANMKEINIEDMNYE 100
Query: 442 ALRDLLQFMYQGEVNVKQEELASFI 516
+ LL F Y GE+ + + S +
Sbjct: 101 TVDALLSFAYTGELRITTSNVQSIM 125
>AF067219-16|AAC17022.1| 531|Caenorhabditis elegans Hypothetical
protein R12E2.1 protein.
Length = 531
Score = 50.4 bits (115), Expect = 2e-06
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Frame = +1
Query: 274 GLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSAL 447
GL +R L DVTL + + AH++VLS CSPYF MF +M + ++++ L
Sbjct: 48 GLKNRDVLCDVTLICGWKRINAHRVVLSACSPYFLSMFTSQMAECYMREINMEEIEPPTL 107
Query: 448 RDLLQFMYQGEVNVKQEELASFI 516
L++F Y G + + + +
Sbjct: 108 EALIEFCYTGAIAIDDSNVQDIL 130
>Z82059-11|CAC42351.2| 591|Caenorhabditis elegans Hypothetical
protein T27E9.4b protein.
Length = 591
Score = 49.2 bits (112), Expect = 4e-06
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
Frame = +1
Query: 268 FHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMNPTQHPIVFL----KDVS 435
F+ L S+ L DV L E R L AHK++L+ PYF+ MF ++ + + + D++
Sbjct: 41 FNELRSKCQLCDVALLVENRKLSAHKVILAATIPYFRGMFTLDLMEANMKEINIEDSDMN 100
Query: 436 HSALRDLLQFMYQGEVNVKQEELASFI 516
+ + LL F Y GE+ + + S +
Sbjct: 101 YETVDALLSFAYTGELRITTSNVQSIM 127
>DQ338465-1|ABC67522.1| 690|Caenorhabditis elegans KEL-8 protein.
Length = 690
Score = 45.2 bits (102), Expect = 7e-05
Identities = 21/79 (26%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Frame = +1
Query: 292 DLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQF 465
+L DV L G +++AH+ +L+ SPYF+ MF M + + L+D+ ++R ++ +
Sbjct: 109 ELCDVELLVAGSVIRAHRYILAAASPYFKAMFTNGMVEMKKLTIELQDIPEESVRIIVDY 168
Query: 466 MYQGEVNVKQEELASFIST 522
+Y ++ + + I T
Sbjct: 169 IYTDKIAITMNNVHQLIFT 187
>AF067946-5|AAC17684.4| 690|Caenorhabditis elegans Hypothetical
protein W02G9.2 protein.
Length = 690
Score = 45.2 bits (102), Expect = 7e-05
Identities = 21/79 (26%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Frame = +1
Query: 292 DLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQF 465
+L DV L G +++AH+ +L+ SPYF+ MF M + + L+D+ ++R ++ +
Sbjct: 109 ELCDVELLVAGSVIRAHRYILAAASPYFKAMFTNGMVEMKKLTIELQDIPEESVRIIVDY 168
Query: 466 MYQGEVNVKQEELASFIST 522
+Y ++ + + I T
Sbjct: 169 IYTDKIAITMNNVHQLIFT 187
>Z79759-4|CAB02139.2| 395|Caenorhabditis elegans Hypothetical
protein ZK858.4 protein.
Length = 395
Score = 43.2 bits (97), Expect = 3e-04
Identities = 24/109 (22%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Frame = +1
Query: 193 VVAIMASDEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPY 372
V I ++E N + + L S+ L D + G++++AHK VL+ SP
Sbjct: 166 VETITTTNEPIQFEPTNSEQQLIEDYQRLFSQELLCDFAINVNGKIIRAHKAVLAARSPV 225
Query: 373 FQEMFKMNPT---QHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELAS 510
F M T + ++++ D+ + + +++ ++Y G N ++A+
Sbjct: 226 FNAMLTHQDTDEAKSSMMYINDMDYDVIYEMVYYIYCGRCNKDITDMAT 274
>Z69902-7|CAA93769.1| 618|Caenorhabditis elegans Hypothetical
protein C47D12.7 protein.
Length = 618
Score = 43.2 bits (97), Expect = 3e-04
Identities = 18/66 (27%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Frame = +1
Query: 331 LQAHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEEL 504
+ AH+++LS S YF+ MF + + I+ +K+V L L+ +MY G + + ++ +
Sbjct: 82 IHAHRVILSASSSYFRAMFTGGLRESTQRIIPIKEVDVEVLSQLIDYMYTGRMRIDEQNV 141
Query: 505 ASFIST 522
+ ++T
Sbjct: 142 QTILAT 147
>U67737-1|AAC63596.1| 395|Caenorhabditis elegans MEL-26 protein.
Length = 395
Score = 43.2 bits (97), Expect = 3e-04
Identities = 24/109 (22%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Frame = +1
Query: 193 VVAIMASDEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPY 372
V I ++E N + + L S+ L D + G++++AHK VL+ SP
Sbjct: 166 VETITTTNEPIQFEPTNSEQQLIEDYQRLFSQELLCDFAINVNGKIIRAHKAVLAARSPV 225
Query: 373 FQEMFKMNPT---QHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELAS 510
F M T + ++++ D+ + + +++ ++Y G N ++A+
Sbjct: 226 FNAMLTHQDTDEAKSSMMYINDMDYDVIYEMVYYIYCGRCNKDITDMAT 274
>AB023424-1|BAA82800.1| 618|Caenorhabditis elegans kel-1 protein.
Length = 618
Score = 43.2 bits (97), Expect = 3e-04
Identities = 18/66 (27%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Frame = +1
Query: 331 LQAHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEEL 504
+ AH+++LS S YF+ MF + + I+ +K+V L L+ +MY G + + ++ +
Sbjct: 82 IHAHRVILSASSSYFRAMFTGGLRESTQRIIPIKEVDVEVLSQLIDYMYTGRMRIDEQNV 141
Query: 505 ASFIST 522
+ ++T
Sbjct: 142 QTILAT 147
>U13072-5|AAK31400.1| 390|Caenorhabditis elegans Hypothetical
protein C07D10.2a protein.
Length = 390
Score = 42.3 bits (95), Expect = 5e-04
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +1
Query: 250 ANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMN--PTQHPIVFL 423
++++ L G D TL E R L+AHK +L+ SP F M + + Q+ L
Sbjct: 187 SDVTKDLENLYRSGKHADFTLVVEERELKAHKAILAARSPVFAAMMEPHTAEAQNSRAIL 246
Query: 424 KDVSHSALRDLLQFMYQG 477
+D+ + ++ +L ++Y G
Sbjct: 247 RDIDYEVVQAILYYIYTG 264
>U13072-4|AAL00851.1| 397|Caenorhabditis elegans Hypothetical
protein C07D10.2b protein.
Length = 397
Score = 42.3 bits (95), Expect = 5e-04
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +1
Query: 250 ANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMN--PTQHPIVFL 423
++++ L G D TL E R L+AHK +L+ SP F M + + Q+ L
Sbjct: 194 SDVTKDLENLYRSGKHADFTLVVEERELKAHKAILAARSPVFAAMMEPHTAEAQNSRAIL 253
Query: 424 KDVSHSALRDLLQFMYQG 477
+D+ + ++ +L ++Y G
Sbjct: 254 RDIDYEVVQAILYYIYTG 271
>AL032663-3|CAA21761.1| 320|Caenorhabditis elegans Hypothetical
protein Y75B12B.4 protein.
Length = 320
Score = 41.9 bits (94), Expect = 7e-04
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = +1
Query: 295 LVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMNPTQHPIVFLK--DVSHSALRDLLQFM 468
L DV L EG+ + K VL+ S +FQ+MF N + +K DV+HS DLL +
Sbjct: 159 LTDVVLVLEGKHVHVGKQVLATSSQFFQKMFYSNFAEKTQAEIKIDDVTHSEFIDLLNVI 218
Query: 469 YQGEVNVKQEELASFI 516
Y + + ++ +
Sbjct: 219 YPTHMLINSSNVSHLL 234
>AF519108-1|AAM74222.1| 909|Caenorhabditis elegans EOR-1 protein.
Length = 909
Score = 41.9 bits (94), Expect = 7e-04
Identities = 27/114 (23%), Positives = 46/114 (40%), Gaps = 7/114 (6%)
Frame = +1
Query: 196 VAIMASDEQFSLCWNNFHANMSAGFHGLLSR-------GDLVDVTLAAEGRLLQAHKLVL 354
+ ++AS E LC F + H L R G DV + + + AH+ +L
Sbjct: 1 MTLVASSENTGLCPMTFDDSSGQTSHMLFQRLQYQRKTGRFCDVEIVVQNKSFAAHRNIL 60
Query: 355 SVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFI 516
+ SPYF +FK + + S L +MY G V + + ++ +
Sbjct: 61 AAHSPYFDAIFKYCKITKEQLTINSKSPQVFELFLNYMYSGTVIIDRSSVSELL 114
>AF502568-1|AAM74151.1| 909|Caenorhabditis elegans EOR-1 protein.
Length = 909
Score = 41.9 bits (94), Expect = 7e-04
Identities = 27/114 (23%), Positives = 46/114 (40%), Gaps = 7/114 (6%)
Frame = +1
Query: 196 VAIMASDEQFSLCWNNFHANMSAGFHGLLSR-------GDLVDVTLAAEGRLLQAHKLVL 354
+ ++AS E LC F + H L R G DV + + + AH+ +L
Sbjct: 1 MTLVASSENTGLCPMTFDDSSGQTSHMLFQRLQYQRKTGRFCDVEIVVQNKSFAAHRNIL 60
Query: 355 SVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFI 516
+ SPYF +FK + + S L +MY G V + + ++ +
Sbjct: 61 AAHSPYFDAIFKYCKITKEQLTINSKSPQVFELFLNYMYSGTVIIDRSSVSELL 114
>AF100669-8|AAK39268.1| 909|Caenorhabditis elegans Egl-1
suppressor/dio uptake defective/raf enhancer protein 1
protein.
Length = 909
Score = 41.9 bits (94), Expect = 7e-04
Identities = 27/114 (23%), Positives = 46/114 (40%), Gaps = 7/114 (6%)
Frame = +1
Query: 196 VAIMASDEQFSLCWNNFHANMSAGFHGLLSR-------GDLVDVTLAAEGRLLQAHKLVL 354
+ ++AS E LC F + H L R G DV + + + AH+ +L
Sbjct: 1 MTLVASSENTGLCPMTFDDSSGQTSHMLFQRLQYQRKTGRFCDVEIVVQNKSFAAHRNIL 60
Query: 355 SVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFI 516
+ SPYF +FK + + S L +MY G V + + ++ +
Sbjct: 61 AAHSPYFDAIFKYCKITKEQLTINSKSPQVFELFLNYMYSGTVIIDRSSVSELL 114
>Z77660-9|CAB01179.1| 602|Caenorhabditis elegans Hypothetical
protein F38H4.7 protein.
Length = 602
Score = 38.7 bits (86), Expect = 0.006
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Frame = +1
Query: 331 LQAHKLVLSVCSPYFQEMFK--MNP--TQHPI-VFLKDVSHSALRDLLQFMYQGEVNVKQ 495
+ AHK VLS+ S F MF + P T+ + + L DV SA LL+F+Y EV ++
Sbjct: 204 IPAHKFVLSIGSVVFDAMFNGGLTPKNTEEALEIELPDVEPSAFLALLKFLYSDEVKIEA 263
Query: 496 EELASFIST 522
E + + + T
Sbjct: 264 ESVMTTLYT 272
>L14433-2|AAA27978.1| 410|Caenorhabditis elegans Hypothetical
protein C50C3.8 protein.
Length = 410
Score = 35.9 bits (79), Expect = 0.043
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Frame = +1
Query: 301 DVTLAAEGRLLQAHKLVLSVCSPYFQEMF---KMNPTQHPIVFLKDVSHSALRDLLQFMY 471
D + + ++AH+ +L SP F+ MF M Q + ++D + ++R +++FMY
Sbjct: 220 DCVIHVGNKHIKAHRCILGQNSPVFKSMFSSPNMIEAQKGEIHIEDAKYDSVRAMVEFMY 279
Query: 472 QG 477
G
Sbjct: 280 TG 281
>Z68216-4|CAA92463.2| 565|Caenorhabditis elegans Hypothetical
protein F27C8.5 protein.
Length = 565
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/73 (20%), Positives = 32/73 (43%)
Frame = +1
Query: 301 DVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGE 480
DV + + H +V+ S F E F + + D ++R + +MY GE
Sbjct: 36 DVKIQLKTGFDMVHSVVICAHSDVFSETFDNQRAPYQPFNMTDFDPDSVRRVFDWMYSGE 95
Query: 481 VNVKQEELASFIS 519
+++ + +A ++
Sbjct: 96 IDIPETTIADVLA 108
>U80839-11|AAB37912.2| 261|Caenorhabditis elegans Hypothetical
protein ZC204.3 protein.
Length = 261
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 262 AGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFK 390
A + + S + D L E + L +K LS+ S YF E+FK
Sbjct: 98 AEYEKMFSESEDTDAVLVVEDKRLHVNKEFLSLHSTYFAELFK 140
>Z66512-2|CAA91323.1| 387|Caenorhabditis elegans Hypothetical
protein F52H3.3 protein.
Length = 387
Score = 29.9 bits (64), Expect = 2.8
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +1
Query: 292 DLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMN--PTQHPIVFLKDVSHSALRDLLQF 465
++ D+TL + L +K L++ SP F MF N + V L+DV R+LL
Sbjct: 226 NICDMTLVINKQKLFVNKAYLALYSPVFYAMFFSNFQEREKTQVELEDVVLEEFRELLHV 285
Query: 466 MY 471
+Y
Sbjct: 286 IY 287
>U80953-3|AAB52554.1| 350|Caenorhabditis elegans Abnormal dauer
formation protein 7 protein.
Length = 350
Score = 29.9 bits (64), Expect = 2.8
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -1
Query: 181 PILSFVLIIPVGETFE-KNITQCSQQSTLHISEVRPPRLNDVLDXQNLKEFP 29
P+ F+L +P G TF N C ++ H +E N++LD N+KE P
Sbjct: 8 PVFIFLLSLPHGLTFNCTNSGVCIEKMKQHRTEYLK---NEILDQLNMKEAP 56
>U72884-1|AAC47389.1| 350|Caenorhabditis elegans DAF-7 protein.
Length = 350
Score = 29.9 bits (64), Expect = 2.8
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -1
Query: 181 PILSFVLIIPVGETFE-KNITQCSQQSTLHISEVRPPRLNDVLDXQNLKEFP 29
P+ F+L +P G TF N C ++ H +E N++LD N+KE P
Sbjct: 8 PVFIFLLSLPHGLTFNCTNSGVCIEKMKQHRTEYLK---NEILDQLNMKEAP 56
>U72883-1|AAC47390.1| 350|Caenorhabditis elegans dauer larva
development regulatorygrowth factor protein.
Length = 350
Score = 29.9 bits (64), Expect = 2.8
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -1
Query: 181 PILSFVLIIPVGETFE-KNITQCSQQSTLHISEVRPPRLNDVLDXQNLKEFP 29
P+ F+L +P G TF N C ++ H +E N++LD N+KE P
Sbjct: 8 PVFIFLLSLPHGLTFNCTNSGVCIEKMKQHRTEYLK---NEILDQLNMKEAP 56
>U56965-9|AAB52662.2| 265|Caenorhabditis elegans Hypothetical
protein C15H9.2 protein.
Length = 265
Score = 29.9 bits (64), Expect = 2.8
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Frame = +1
Query: 292 DLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMF-----KMNPTQHPIVFLKDVSHSALRDL 456
D +V L E H VLS+ S YF+ +F + + PI LK +S + R+L
Sbjct: 123 DSSNVVLKVEDEEFHVHTFVLSMASQYFKVLFNGSFIESSDLTKPIE-LKGISSCSFRNL 181
Query: 457 LQFMY 471
L +Y
Sbjct: 182 LNCIY 186
>AC025723-13|AAK29939.1| 286|Caenorhabditis elegans Hypothetical
protein Y54F10AM.11 protein.
Length = 286
Score = 29.5 bits (63), Expect = 3.7
Identities = 21/86 (24%), Positives = 36/86 (41%)
Frame = +1
Query: 262 AGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSHS 441
AG + + + D + E R K L+ S FQ +F P P + ++DVS
Sbjct: 2 AGMDFSMPKELVFDAIVVVEERKFHVGKQYLATHSRVFQSLFA-TPGD-PEITIQDVSSE 59
Query: 442 ALRDLLQFMYQGEVNVKQEELASFIS 519
L+FMY + + + S ++
Sbjct: 60 DFLKFLEFMYHNTDQITAQNVESLLT 85
>AL132865-13|CAB60609.1| 496|Caenorhabditis elegans Hypothetical
protein Y62E10A.16 protein.
Length = 496
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 268 FHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMF 387
+ L +G+ D+ LAA GR + HKL L + +F+ MF
Sbjct: 60 YQKLFLQGENSDIVLAACGREWRVHKLYLKQ-TKFFESMF 98
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,887,599
Number of Sequences: 27780
Number of extensions: 244777
Number of successful extensions: 512
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 501
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 508
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2486134266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -