Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_K04
(975 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 33 0.41
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 0.94
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 0.94
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 0.94
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 0.94
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 0.94
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 26 1.5
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 1.6
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 5.0
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 5.0
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 29 6.6
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 24 7.0
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 28 8.8
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 28 8.8
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 28 8.8
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 32.7 bits (71), Expect = 0.41
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = -3
Query: 865 GXGGGGXXXXXXXXXXXGXXGGXXXXXXXXXXXGGGXPPPPPXXXXKXXXPXGGEG 698
G GGGG G GG GGG PPPP GG G
Sbjct: 73 GGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGG 128
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.5 bits (68), Expect = 0.94
Identities = 25/104 (24%), Positives = 27/104 (25%), Gaps = 3/104 (2%)
Frame = -2
Query: 755 PPPPPPXXXKXXXPPXGGGGXXXXXXXXXXFXXXXXXXXXXXXXGXXTPPPPX---FXGG 585
PPPPP PP G G PPPP + GG
Sbjct: 287 PPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGG 346
Query: 584 XPXXXXXXXXXXXXXXFF*KXPXPPXXXXXXXXXXXXXPPPPPP 453
P + P PP PPPPPP
Sbjct: 347 MPPPPPPRYPSAGPGMY---PPPPPSRPPAPPSGHGMIPPPPPP 387
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/55 (29%), Positives = 16/55 (29%)
Frame = +3
Query: 696 PPSPPXGXXXFXXXXGGGGGXPPPXXXXXXXXXXXPPXXPXXXXXXSXXXXPPPP 860
PP PP G G PPP PP P PPPP
Sbjct: 299 PPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPP 353
Score = 29.5 bits (63), Expect = 3.8
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = +3
Query: 696 PPSPPXGXXXFXXXXGGGGGXPPPXXXXXXXXXXXPPXXPXXXXXXSXXXXPPPP 860
PP PP G GG PPP PP P PPPP
Sbjct: 317 PPPPPPSRFG---PPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPP 368
Score = 25.4 bits (53), Expect(2) = 9.9
Identities = 14/53 (26%), Positives = 14/53 (26%)
Frame = -1
Query: 612 PPPPXFXXGXPXXXXXXXXXXXXXXXFLKXXPPPXXXXXXXXXXXXXPPPPPP 454
PPPP P PPP PPPPPP
Sbjct: 287 PPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPP 339
Score = 21.0 bits (42), Expect(2) = 9.9
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -1
Query: 468 PPPPPP 451
PPPPPP
Sbjct: 348 PPPPPP 353
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.5 bits (68), Expect = 0.94
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = +3
Query: 699 PSPPXGXXXFXXXXGGGGGXPPPXXXXXXXXXXXPPXXPXXXXXXSXXXXPPPPXP 866
P PP G GG PPP PP P S PPPP P
Sbjct: 713 PPPPPGLPPIT---GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 765
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 767 GGGXPPPPPPXXXKXXXPPXGGGG 696
GG PPPPPP PP GG
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGG 779
Score = 29.9 bits (64), Expect = 2.9
Identities = 19/60 (31%), Positives = 19/60 (31%)
Frame = -2
Query: 764 GGXPPPPPPXXXKXXXPPXGGGGXXXXXXXXXXFXXXXXXXXXXXXXGXXTPPPPXFXGG 585
GG PPPPPP PP GG G PPPP GG
Sbjct: 724 GGPPPPPPP----GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
Score = 29.9 bits (64), Expect = 2.9
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = +3
Query: 696 PPSPPXGXXXFXXXXGGGGGXPPPXXXXXXXXXXXPPXXPXXXXXXSXXXXPPPP 860
PP PP G GG PPP PP P PPPP
Sbjct: 728 PPPPPGGLPPIT-----GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.5 bits (68), Expect = 0.94
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = +3
Query: 699 PSPPXGXXXFXXXXGGGGGXPPPXXXXXXXXXXXPPXXPXXXXXXSXXXXPPPPXP 866
P PP G GG PPP PP P S PPPP P
Sbjct: 713 PPPPPGLPPIT---GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 765
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 767 GGGXPPPPPPXXXKXXXPPXGGGG 696
GG PPPPPP PP GG
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGG 779
Score = 29.9 bits (64), Expect = 2.9
Identities = 19/60 (31%), Positives = 19/60 (31%)
Frame = -2
Query: 764 GGXPPPPPPXXXKXXXPPXGGGGXXXXXXXXXXFXXXXXXXXXXXXXGXXTPPPPXFXGG 585
GG PPPPPP PP GG G PPPP GG
Sbjct: 724 GGPPPPPPP----GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
Score = 29.9 bits (64), Expect = 2.9
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = +3
Query: 696 PPSPPXGXXXFXXXXGGGGGXPPPXXXXXXXXXXXPPXXPXXXXXXSXXXXPPPP 860
PP PP G GG PPP PP P PPPP
Sbjct: 728 PPPPPGGLPPIT-----GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.5 bits (68), Expect = 0.94
Identities = 25/104 (24%), Positives = 27/104 (25%), Gaps = 3/104 (2%)
Frame = -2
Query: 755 PPPPPPXXXKXXXPPXGGGGXXXXXXXXXXFXXXXXXXXXXXXXGXXTPPPPX---FXGG 585
PPPPP PP G G PPPP + GG
Sbjct: 297 PPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGG 356
Query: 584 XPXXXXXXXXXXXXXXFF*KXPXPPXXXXXXXXXXXXXPPPPPP 453
P + P PP PPPPPP
Sbjct: 357 MPPPPPPRYPSAGPGMY---PPPPPSRPPAPPSGHGMIPPPPPP 397
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/55 (29%), Positives = 16/55 (29%)
Frame = +3
Query: 696 PPSPPXGXXXFXXXXGGGGGXPPPXXXXXXXXXXXPPXXPXXXXXXSXXXXPPPP 860
PP PP G G PPP PP P PPPP
Sbjct: 309 PPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPP 363
Score = 29.5 bits (63), Expect = 3.8
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = +3
Query: 696 PPSPPXGXXXFXXXXGGGGGXPPPXXXXXXXXXXXPPXXPXXXXXXSXXXXPPPP 860
PP PP G GG PPP PP P PPPP
Sbjct: 327 PPPPPPSRFG---PPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPP 378
Score = 25.4 bits (53), Expect(2) = 9.9
Identities = 14/53 (26%), Positives = 14/53 (26%)
Frame = -1
Query: 612 PPPPXFXXGXPXXXXXXXXXXXXXXXFLKXXPPPXXXXXXXXXXXXXPPPPPP 454
PPPP P PPP PPPPPP
Sbjct: 297 PPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPP 349
Score = 21.0 bits (42), Expect(2) = 9.9
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -1
Query: 468 PPPPPP 451
PPPPPP
Sbjct: 358 PPPPPP 363
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.5 bits (68), Expect = 0.94
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = +3
Query: 699 PSPPXGXXXFXXXXGGGGGXPPPXXXXXXXXXXXPPXXPXXXXXXSXXXXPPPPXP 866
P PP G GG PPP PP P S PPPP P
Sbjct: 296 PPPPPGLPPIT---GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 348
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 767 GGGXPPPPPPXXXKXXXPPXGGGG 696
GG PPPPPP PP GG
Sbjct: 339 GGPPPPPPPPGGCPPPPPPPPPGG 362
Score = 29.9 bits (64), Expect = 2.9
Identities = 19/60 (31%), Positives = 19/60 (31%)
Frame = -2
Query: 764 GGXPPPPPPXXXKXXXPPXGGGGXXXXXXXXXXFXXXXXXXXXXXXXGXXTPPPPXFXGG 585
GG PPPPPP PP GG G PPPP GG
Sbjct: 307 GGPPPPPPP----GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 362
Score = 29.9 bits (64), Expect = 2.9
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = +3
Query: 696 PPSPPXGXXXFXXXXGGGGGXPPPXXXXXXXXXXXPPXXPXXXXXXSXXXXPPPP 860
PP PP G GG PPP PP P PPPP
Sbjct: 311 PPPPPGGLPPIT-----GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 360
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 26.2 bits (55), Expect(2) = 1.5
Identities = 16/54 (29%), Positives = 16/54 (29%)
Frame = +2
Query: 452 GGGGGGGXXXXXXXXXXXXXGGGXXXXXXXXXXXXXXXXLXXXGXPXXXXGGGG 613
GGGGGGG GGG L G GGGG
Sbjct: 57 GGGGGGGGGFGGGNGGFGGGGGGSGGGGGGNNIGSLVGSLIGGGGGGGNYGGGG 110
Score = 23.0 bits (47), Expect(2) = 1.5
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2
Query: 446 FXGGGGGGG 472
F GGGGGGG
Sbjct: 51 FGGGGGGGG 59
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = +3
Query: 696 PPSPPXGXXXFXXXXGGGGGXPPPXXXXXXXXXXXPPXXPXXXXXXSXXXXPPPPXP 866
PP P G F G GG PPP PP PPPP P
Sbjct: 66 PPPVPNG---FIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPP 119
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -2
Query: 767 GGGXPPPPPPXXXKXXXPPXGGGG 696
G G PPPPPP PP G GG
Sbjct: 645 GAGAPPPPPP------PPPSGAGG 662
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -2
Query: 767 GGGXPPPPPPXXXKXXXPPXGGGG 696
G G PPPPPP PP G GG
Sbjct: 471 GAGAPPPPPP------PPPSGAGG 488
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/57 (26%), Positives = 15/57 (26%)
Frame = +3
Query: 696 PPSPPXGXXXFXXXXGGGGGXPPPXXXXXXXXXXXPPXXPXXXXXXSXXXXPPPPXP 866
PP PP G G PPP P P PPP P
Sbjct: 106 PPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPP 162
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/57 (26%), Positives = 15/57 (26%)
Frame = +3
Query: 696 PPSPPXGXXXFXXXXGGGGGXPPPXXXXXXXXXXXPPXXPXXXXXXSXXXXPPPPXP 866
PP PP G G PPP P P PPP P
Sbjct: 137 PPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSTEGNASRRPPPPP 193
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/57 (26%), Positives = 15/57 (26%)
Frame = +3
Query: 696 PPSPPXGXXXFXXXXGGGGGXPPPXXXXXXXXXXXPPXXPXXXXXXSXXXXPPPPXP 866
PP PP G G PPP P P PPP P
Sbjct: 168 PPPPPTGEPQDLSTEGNASRRPPPPPKGTGTPPPPPTGEPQDLSAEGYASRRPPPPP 224
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 23.8 bits (49), Expect(2) = 7.0
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 471 PPPPPPP 451
PPPPPPP
Sbjct: 579 PPPPPPP 585
Score = 23.0 bits (47), Expect(2) = 7.0
Identities = 13/53 (24%), Positives = 13/53 (24%)
Frame = -1
Query: 612 PPPPXFXXGXPXXXXXXXXXXXXXXXFLKXXPPPXXXXXXXXXXXXXPPPPPP 454
PPPP P L P PPPPPP
Sbjct: 504 PPPPPLLGIAPMSTNAPPPPPMPGMAPLSTGAPTPPPPPPVGMANGGPPPPPP 556
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 28.3 bits (60), Expect = 8.8
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -1
Query: 528 KXXPPPXXXXXXXXXXXXXPPPPPPP 451
K PPP PPPPPPP
Sbjct: 487 KSPPPPPPLPPIATPSSVPPPPPPPP 512
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.3 bits (60), Expect = 8.8
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -2
Query: 767 GGGXPPPPPPXXXKXXXPP 711
GG PPPPPP PP
Sbjct: 134 GGSSPPPPPPPRVPRTPPP 152
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 28.3 bits (60), Expect = 8.8
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -1
Query: 528 KXXPPPXXXXXXXXXXXXXPPPPPPP 451
K PPP PPPPPPP
Sbjct: 494 KSPPPPPPLPPIATPSSVPPPPPPPP 519
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.153 0.521
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,682,033
Number of Sequences: 27780
Number of extensions: 331633
Number of successful extensions: 4740
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2389
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2531861596
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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