Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_K01
(964 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 32 0.10
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 32 0.14
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 28 0.17
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 28 0.76
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 0.98
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 29 0.98
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 29 1.3
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 28 1.7
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 23 2.8
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 23 2.9
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 32.3 bits (70), Expect = 0.10
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -1
Query: 715 PPPPXFXXPXXXPPPFYXXXPTXXXPXKKXPXPPPPP 605
PPPP P P P P P P PPPPP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPA---PIMGGPPPPPPP 767
Score = 31.9 bits (69), Expect = 0.14
Identities = 20/66 (30%), Positives = 21/66 (31%)
Frame = -3
Query: 938 LXAPPPPPXXKXXPPXX*KKKKNTPTXXXXXXPXXXXPPXXXXXXXPXXXXXXPPPXPPP 759
L +PPPPP P P P PP P PPP PPP
Sbjct: 729 LKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGP------PPPPPPP 782
Query: 758 PXXPXG 741
P G
Sbjct: 783 PAVSAG 788
Score = 31.9 bits (69), Expect = 0.14
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = -1
Query: 778 PPRXPPPXXXPXXXXFXPXXXPPPPXFXXPXXXPPPFYXXXPTXXXPXKKXPXPPPP 608
PP PP P PP P P PPP P P PPPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP-----PGVAGAGPPPPPPPPP 783
Score = 30.3 bits (65), Expect = 0.42
Identities = 15/53 (28%), Positives = 16/53 (30%)
Frame = -3
Query: 632 KTPXXPPPXXFXXXXXXXXXXXXXXXXXXPXXPPXXPLXPXXXPXPPPPPXPP 474
K+P PPP PP P PPPPP PP
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 27.9 bits (59), Expect = 2.3
Identities = 14/49 (28%), Positives = 14/49 (28%)
Frame = -1
Query: 619 PPPPPXXXXXXXXXXXXXXXXXXXXPXXPPXXPLXPXXPPXXPHPPXPP 473
PPPPP PP P P P PP PP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 27.1 bits (57), Expect = 3.9
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = -1
Query: 829 PPPXXXPXXXXGXXXXXPPRXPPPXXXPXXXXFXPXXXPPPP 704
P P P PP PPP P P PPPP
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPP---PGVAGAGPPPPPPPP 782
Score = 27.1 bits (57), Expect = 3.9
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -3
Query: 536 PPXXPLXPXXXPXPPPPPXP 477
PP P P PPPPP P
Sbjct: 764 PPPPPGVAGAGPPPPPPPPP 783
Score = 26.6 bits (56), Expect = 5.2
Identities = 17/57 (29%), Positives = 17/57 (29%)
Frame = -2
Query: 774 PGXPPPXXPXXXPXXPPXXXXPPLXFXXXHXXPPPSIXXXPXPXPPXKNXLXPPPXP 604
P PPP P P PP PPP PP PPP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPP---------PPGVAGAGPPPPP 779
Score = 26.2 bits (55), Expect = 6.9
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -3
Query: 536 PPXXPLXPXXXPXPPPPPXPP 474
PP P PPPPP PP
Sbjct: 763 PPPPPPGVAGAGPPPPPPPPP 783
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 31.9 bits (69), Expect = 0.14
Identities = 25/101 (24%), Positives = 25/101 (24%)
Frame = -3
Query: 776 PPXPPPPXXPXGXXFXPXXGXXPPFXLXPXXXAPPLLLXXTHXPXPPXKTPXXPPPXXFX 597
PP PPP P G P PP L PP P P
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPPVP-TPPSLPPSAPPSLPPSAPPSLPMGAPAA 446
Query: 596 XXXXXXXXXXXXXXXXXPXXPPXXPLXPXXXPXPPPPPXPP 474
P PP P P P P P P P
Sbjct: 447 PPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 30.7 bits (66), Expect = 0.32
Identities = 30/122 (24%), Positives = 33/122 (27%), Gaps = 12/122 (9%)
Frame = -3
Query: 941 GLXAPPPPP------XXKXXPPXX*KKKKNTPTXXXXXXP---XXXXPPXXXXXXXPXXX 789
G APPPPP + PP + + P P PP
Sbjct: 357 GRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPP 416
Query: 788 XXXP---PPXPPPPXXPXGXXFXPXXGXXPPFXLXPXXXAPPLLLXXTHXPXPPXKTPXX 618
P PP PP P P P APPL P P P
Sbjct: 417 VPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAP 476
Query: 617 PP 612
PP
Sbjct: 477 PP 478
Score = 30.3 bits (65), Expect = 0.42
Identities = 31/123 (25%), Positives = 31/123 (25%), Gaps = 4/123 (3%)
Frame = -1
Query: 829 PPPXXXPXXXXGXXXXXPPRXPPPXXXPXXXXFXPXXXPPPPXFXXPXXXPPPFYXXXPT 650
PPP P PP PP P PP PPP
Sbjct: 253 PPPIPPPS---NGTVSSPPNSPPRPIAPVSMNPAINSTSKPPL-------PPPSSRVSAA 302
Query: 649 XXXPXKKXPXPPPPPXXXXXXXXXXXXXXXXXXXXPXXPPXXP----LXPXXPPXXPHPP 482
KK P PPPPP P PP P P PP
Sbjct: 303 ALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPP 362
Query: 481 XPP 473
PP
Sbjct: 363 PPP 365
Score = 28.7 bits (61), Expect = 1.3
Identities = 17/61 (27%), Positives = 17/61 (27%), Gaps = 3/61 (4%)
Frame = -1
Query: 778 PPRXPP---PXXXPXXXXFXPXXXPPPPXFXXPXXXPPPFYXXXPTXXXPXKKXPXPPPP 608
PP PP P P P P P PP P P PPP
Sbjct: 420 PPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPA 479
Query: 607 P 605
P
Sbjct: 480 P 480
Score = 27.9 bits (59), Expect = 2.3
Identities = 32/131 (24%), Positives = 32/131 (24%), Gaps = 8/131 (6%)
Frame = -1
Query: 841 PXXXPPPXXX-----PXXXXGXXXXXPPRXPPPXXXPXXXXFXP---XXXPPPPXFXXPX 686
P PPP P PP PPP P PPPP P
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPP---PPR 367
Query: 685 XXPPPFYXXXPTXXXPXKKXPXPPPPPXXXXXXXXXXXXXXXXXXXXPXXPPXXPLXPXX 506
P P P PPP P P L P
Sbjct: 368 SAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSA 427
Query: 505 PPXXPHPPXPP 473
PP P P PP
Sbjct: 428 PPSLP-PSAPP 437
Score = 27.1 bits (57), Expect = 3.9
Identities = 29/130 (22%), Positives = 31/130 (23%), Gaps = 9/130 (6%)
Frame = -1
Query: 829 PPPXXXPXXXXGXXXXXPPRXPPPXXXPXXXXFXPXXXPPPPXFXXPXXXPPPFYXXXPT 650
PPP P PP+ P PPP PP P
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPP----APP 392
Query: 649 XXXPXKKXPXPPP---------PPXXXXXXXXXXXXXXXXXXXXPXXPPXXPLXPXXPPX 497
P + P PP PP P P P P PP
Sbjct: 393 PAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPS 452
Query: 496 XPHPPXPPXG 467
P P P G
Sbjct: 453 APIAPPLPAG 462
Score = 26.6 bits (56), Expect = 5.2
Identities = 17/58 (29%), Positives = 17/58 (29%)
Frame = -2
Query: 777 PPGXPPPXXPXXXPXXPPXXXXPPLXFXXXHXXPPPSIXXXPXPXPPXKNXLXPPPXP 604
PP PPP PP PP S P PP PPP P
Sbjct: 311 PP--PPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 26.2 bits (55), Expect = 6.9
Identities = 27/107 (25%), Positives = 27/107 (25%), Gaps = 7/107 (6%)
Frame = -1
Query: 772 RXPPPXXXPXXXXFXPXXXPPPPXFXXPXXXP--PPFYXXXPTXXXPXKKXPXPPP--PP 605
R PPP P P P P P P P P PP PP
Sbjct: 374 RQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPP 433
Query: 604 XXXXXXXXXXXXXXXXXXXXPXXPPXX---PLXPXXPPXXPHPPXPP 473
P PP P P PP P PP P
Sbjct: 434 SAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAP 480
Score = 25.8 bits (54), Expect = 9.1
Identities = 18/57 (31%), Positives = 18/57 (31%), Gaps = 1/57 (1%)
Frame = -2
Query: 777 PPGXPPPXXPXXXPXXPPXXXXPPLXFXXXHXXP-PPSIXXXPXPXPPXKNXLXPPP 610
PP PP P P P P L P PPS P P P P P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAP-PLPAGMPAAPPLP 470
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.9 bits (59), Expect = 2.3
Identities = 22/82 (26%), Positives = 23/82 (28%), Gaps = 2/82 (2%)
Frame = -1
Query: 712 PPPXFXXPXXXPPPFYXXXPTXXXPXKKXPXPPPPPXXXXXXXXXXXXXXXXXXXXPXXP 533
PPP F P P P+ P P PPPPP
Sbjct: 167 PPPSFQPPSAAAPA--TSLPSDYNP----PPPPPPPPAVEDQAADANEPDDYYSSGRAVS 220
Query: 532 PXXP--LXPXXPPXXPHPPXPP 473
P P P P PP PP
Sbjct: 221 PEIPPTYTPKQADPLPAPPPPP 242
Score = 27.5 bits (58), Expect(2) = 0.17
Identities = 22/79 (27%), Positives = 23/79 (29%), Gaps = 1/79 (1%)
Frame = -3
Query: 710 PPFXLXPXXXAPPLLLXXTHXPXPPXKTPXXPPPXXFXXXXXXXXXXXXXXXXXXPXXPP 531
PP P AP L + P PP P P P PP
Sbjct: 168 PPSFQPPSAAAPATSLPSDYNPPPPPPPP--PAVEDQAADANEPDDYYSSGRAVSPEIPP 225
Query: 530 XX-PLXPXXXPXPPPPPXP 477
P P PPPPP P
Sbjct: 226 TYTPKQADPLPAPPPPPPP 244
Score = 22.6 bits (46), Expect(2) = 0.17
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -3
Query: 503 PXPPPPPXPP 474
P PPPP PP
Sbjct: 239 PPPPPPTLPP 248
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 28.3 bits (60), Expect = 1.7
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 727 PXXXPPPPXFXXPXXXPPP 671
P PPPP F P PPP
Sbjct: 9 PPPPPPPPGFEPPSQPPPP 27
Score = 27.5 bits (58), Expect = 3.0
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -1
Query: 778 PPRXPPPXXXPXXXXFXPXXXPPPP 704
PP PPP P F P PPPP
Sbjct: 5 PPGNPPP--PPPPPGFEPPSQPPPP 27
Score = 27.1 bits (57), Expect = 3.9
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -3
Query: 536 PPXXPLXPXXXPXPPPPPXPP 474
PP P P P PPP PP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPP 29
Score = 26.6 bits (56), Expect = 5.2
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -3
Query: 779 PPPXPPPPXXPXGXXFXPXXGXXPP 705
PP PPPP P G F P PP
Sbjct: 5 PPGNPPPPPPPPG--FEPPSQPPPP 27
Score = 26.6 bits (56), Expect(2) = 0.76
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -3
Query: 536 PPXXPLXPXXXPXPPPPPXPP 474
PP P P PPPP PP
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPP 30
Score = 26.2 bits (55), Expect = 6.9
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -1
Query: 535 PPXXPLXPXXPPXXPHPPXPPXGKXK 458
PP P P P PP PP G K
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPPGYVK 34
Score = 21.0 bits (42), Expect(2) = 0.76
Identities = 7/14 (50%), Positives = 7/14 (50%)
Frame = -3
Query: 641 PPXKTPXXPPPXXF 600
PP P PPP F
Sbjct: 5 PPGNPPPPPPPPGF 18
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.1 bits (62), Expect = 0.98
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = -1
Query: 709 PPXFXXPXXXPPPFYXXXPTXXXPXKKXPXPPPPP 605
PP P PPP P P P PPP
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
Score = 28.3 bits (60), Expect = 1.7
Identities = 17/58 (29%), Positives = 18/58 (31%), Gaps = 2/58 (3%)
Frame = -2
Query: 771 GXPPPXXPXXXPXXPPXXXXPPLXFXXXHXXPPPSIXXXP--XPXPPXKNXLXPPPXP 604
G P P P P PP PP S+ P P P PPP P
Sbjct: 1679 GGMAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 27.5 bits (58), Expect = 3.0
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -3
Query: 536 PPXXPLXPXXXPXPPPPPXP 477
PP P P P PPPP P
Sbjct: 1717 PPSAPPMPAGPPSAPPPPLP 1736
Score = 27.1 bits (57), Expect = 3.9
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 535 PPXXPLXPXXPPXXPHPPXP 476
PP P P PP P PP P
Sbjct: 1717 PPSAPPMPAGPPSAPPPPLP 1736
Score = 25.8 bits (54), Expect = 9.1
Identities = 12/36 (33%), Positives = 12/36 (33%)
Frame = -2
Query: 777 PPGXPPPXXPXXXPXXPPXXXXPPLXFXXXHXXPPP 670
P PPP P PP PPL P P
Sbjct: 1711 PMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 22.6 bits (46), Expect(2) = 9.9
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = -3
Query: 944 PGLXAPPPPPXXKXXPP 894
P + AP PPP PP
Sbjct: 1700 PQMSAPTPPPPPMSVPP 1716
Score = 21.0 bits (42), Expect(2) = 9.9
Identities = 8/21 (38%), Positives = 8/21 (38%)
Frame = -3
Query: 779 PPPXPPPPXXPXGXXFXPXXG 717
PP PPPP P G
Sbjct: 1727 PPSAPPPPLPASSAPSVPNPG 1747
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 29.1 bits (62), Expect = 0.98
Identities = 16/56 (28%), Positives = 17/56 (30%)
Frame = -2
Query: 777 PPGXPPPXXPXXXPXXPPXXXXPPLXFXXXHXXPPPSIXXXPXPXPPXKNXLXPPP 610
PP P P P PP PPS P PP + PPP
Sbjct: 150 PPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
Score = 27.9 bits (59), Expect = 2.3
Identities = 19/61 (31%), Positives = 19/61 (31%), Gaps = 3/61 (4%)
Frame = -1
Query: 778 PPRXPPPXXXPXXXXFXPXXXPPPPXFXXPXXXP-PPFYXXXPTXXXPXKKXPXPP--PP 608
PPR P P P PP P P P P P P PP PP
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPP 203
Query: 607 P 605
P
Sbjct: 204 P 204
Score = 26.6 bits (56), Expect = 5.2
Identities = 26/117 (22%), Positives = 28/117 (23%), Gaps = 6/117 (5%)
Frame = -3
Query: 944 PGLXAPP----PPPXXKXXPPXX*KKKKNTPTXXXXXXPXXXXPPXXXXXXXPXXXXXXP 777
P APP PPP PP K + P P P
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMP 198
Query: 776 PPXPPPP--XXPXGXXFXPXXGXXPPFXLXPXXXAPPLLLXXTHXPXPPXKTPXXPP 612
P PPPP P PP P + P P PP
Sbjct: 199 PKVPPPPLSQAPVANTSSRPSSFAPPAGHAPNVTSESPKFPNRGPSIPSASVPPVPP 255
Score = 25.8 bits (54), Expect = 9.1
Identities = 20/79 (25%), Positives = 21/79 (26%)
Frame = -3
Query: 710 PPFXLXPXXXAPPLLLXXTHXPXPPXKTPXXPPPXXFXXXXXXXXXXXXXXXXXXPXXPP 531
P L P APP P P +P PP PP
Sbjct: 133 PQSELRPPTSAPP-------RPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPP 185
Query: 530 XXPLXPXXXPXPPPPPXPP 474
P P P PP PP
Sbjct: 186 SAPSLPSAVPPMPPKVPPP 204
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 28.7 bits (61), Expect = 1.3
Identities = 24/67 (35%), Positives = 24/67 (35%), Gaps = 5/67 (7%)
Frame = +2
Query: 593 RXXXGXGGGXRXFFXGGXGX---GXXXIEGGGXXXWXXKXRGGXXXXGGKXGXXXGXXG- 760
R G G R F GG G G GGG RGG GG G G G
Sbjct: 8 RGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGG----ARGGRGGRGGARGGRGGSSGG 63
Query: 761 -GGXPGG 778
GG GG
Sbjct: 64 RGGAKGG 70
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 28.3 bits (60), Expect = 1.7
Identities = 29/121 (23%), Positives = 32/121 (26%), Gaps = 9/121 (7%)
Frame = -3
Query: 944 PGLXAP---PPPPXXKXXPPXX*KKKKNTPTXXXXXXPXXXXPPXXXXXXXPXXXXXXPP 774
P + AP PP P P K P P P P
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPV 1142
Query: 773 PXP----PPPXXPXGXXFXPXXGXXPPFXLXPXXXAPPLLLXXTHXP--XPPXKTPXXPP 612
P P PP P G P P P PP+ P PP + P P
Sbjct: 1143 PKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPK 1202
Query: 611 P 609
P
Sbjct: 1203 P 1203
Score = 26.6 bits (56), Expect = 5.2
Identities = 18/56 (32%), Positives = 19/56 (33%), Gaps = 2/56 (3%)
Frame = -2
Query: 771 GXPPPXXPXXXPXXP-PXXXXPPL-XFXXXHXXPPPSIXXXPXPXPPXKNXLXPPP 610
G PP P P P P PP+ P PS P P P K P P
Sbjct: 1187 GVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAP 1242
Score = 26.2 bits (55), Expect = 6.9
Identities = 23/100 (23%), Positives = 29/100 (29%), Gaps = 2/100 (2%)
Frame = -2
Query: 765 PPPXXPXXXPXXP-PXXXXPPLXF-XXXHXXPPPSIXXXPXPXPPXKNXLXPPPXPFXXL 592
PP P P P P PP+ P PS+ P P P + + P P P +
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAP--SSGIPPVPKPAAGV 1188
Query: 591 FXXXXXXXXXXXXXXXPXXPLXXPXXXXXPXXXPTPPXPP 472
P P P P+ PP
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPP 1228
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 23.4 bits (48), Expect(2) = 2.8
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -3
Query: 497 PPPPPXPP 474
PPPPP PP
Sbjct: 946 PPPPPPPP 953
Score = 22.2 bits (45), Expect(2) = 2.8
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -3
Query: 515 PXXXPXPPPPP 483
P P PPPPP
Sbjct: 942 PAFPPPPPPPP 952
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 23.4 bits (48), Expect(2) = 2.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -3
Query: 497 PPPPPXPP 474
PPPPP PP
Sbjct: 1095 PPPPPPPP 1102
Score = 22.2 bits (45), Expect(2) = 2.9
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -3
Query: 515 PXXXPXPPPPP 483
P P PPPPP
Sbjct: 1091 PSAVPPPPPPP 1101
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,695,148
Number of Sequences: 5004
Number of extensions: 27411
Number of successful extensions: 356
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 197
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 493304942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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