Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_J24
(926 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein ... 50 8e-08
CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein... 27 0.81
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T... 27 1.1
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T... 27 1.1
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 26 1.4
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 26 1.9
AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless female-s... 25 2.5
AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless male-spe... 25 2.5
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 25 4.3
DQ342048-1|ABC69940.1| 847|Anopheles gambiae STIP protein. 23 9.9
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel... 23 9.9
>AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein
protein.
Length = 680
Score = 50.4 bits (115), Expect = 8e-08
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +2
Query: 458 KHLMRHQSATHLVCEVCGKLYRKDNLI-RHLQLHSDYLPHVCQICPYRGRFYESLKIHLR 634
K + +T++ C C K L+ RHL+ HS+ PH C +C + SL+ H+
Sbjct: 117 KRTQQSTGSTYM-CNYCNYTSNKLFLLSRHLKTHSEDRPHKCVVCERGFKTLASLQNHVN 175
Query: 635 THSGDKPFSCDKC 673
TH+G KP C C
Sbjct: 176 THTGTKPHRCKHC 188
Score = 50.0 bits (114), Expect = 1e-07
Identities = 29/94 (30%), Positives = 39/94 (41%), Gaps = 3/94 (3%)
Frame = +2
Query: 413 QCNLC-KAIIRSDSYQKHLM-RHQSATHLVCEVCGKL-YRKDNLIRHLQLHSDYLPHVCQ 583
+C C S +H+ RH C C L RH++ H+ P C
Sbjct: 184 RCKHCDNCFTTSGELIRHIRYRHTHERPHKCTECDYASVELSKLKRHIRTHTGEKPFQCP 243
Query: 584 ICPYRGRFYESLKIHLRTHSGDKPFSCDKCSLRF 685
C Y L H+R H+G+KP+SCD C RF
Sbjct: 244 HCTYASPDKFKLTRHMRIHTGEKPYSCDVCFARF 277
Score = 49.2 bits (112), Expect = 2e-07
Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 4/111 (3%)
Frame = +2
Query: 353 SNQSEEMPHVAYKEKKKLRIQCNLCK-AIIRSDSYQKHLMRHQSATHLVCEVCGKLYR-K 526
+ E + H+ Y+ + +C C A + ++H+ H C C K
Sbjct: 193 TTSGELIRHIRYRHTHERPHKCTECDYASVELSKLKRHIRTHTGEKPFQCPHCTYASPDK 252
Query: 527 DNLIRHLQLHSDYLPHVCQICPYRGRFYESLKIHLRTHS-GDKP-FSCDKC 673
L RH+++H+ P+ C +C R SLK H H G+KP F C C
Sbjct: 253 FKLTRHMRIHTGEKPYSCDVCFARFTQSNSLKAHKMIHQVGNKPVFQCKLC 303
Score = 48.0 bits (109), Expect = 4e-07
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 3/94 (3%)
Frame = +2
Query: 413 QCNLCKAII-RSDSYQKHLMR-HQSATHLVCEVCGKLYR-KDNLIRHLQLHSDYLPHVCQ 583
QC LC R + H+ H + + C+ C + + + H + H + C+
Sbjct: 299 QCKLCPTTCGRKTDLRIHVQNLHTADKPIKCKRCDSTFPDRYSYKMHAKTHEGEKCYRCE 358
Query: 584 ICPYRGRFYESLKIHLRTHSGDKPFSCDKCSLRF 685
CPY L+ HL H+ KP+ CD+C+ F
Sbjct: 359 YCPYASISMRHLESHLLLHTDQKPYKCDQCAQTF 392
Score = 33.9 bits (74), Expect = 0.007
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +2
Query: 572 HVCQICPYRGRFYESLKIHLRTHSGDKPFSCDKCSLRF 685
++C C Y L HL+THS D+P C C F
Sbjct: 127 YMCNYCNYTSNKLFLLSRHLKTHSEDRPHKCVVCERGF 164
Score = 27.9 bits (59), Expect = 0.46
Identities = 12/28 (42%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +2
Query: 476 QSATHLVCEVCGKLYR-KDNLIRHLQLH 556
++ TH +C C + +R K NLIRH+ +H
Sbjct: 416 KAKTH-ICPTCKRPFRHKGNLIRHMAMH 442
>CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein
protein.
Length = 415
Score = 27.1 bits (57), Expect = 0.81
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +2
Query: 170 IKTITGIEICETDSYPKCVCSNCFALL 250
+KT +E+ +P VC C ALL
Sbjct: 45 VKTYLKLELVPAKDFPSAVCEMCIALL 71
>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1977
Score = 26.6 bits (56), Expect = 1.1
Identities = 14/48 (29%), Positives = 28/48 (58%)
Frame = +2
Query: 290 DKLLHQAVTADFQIDNANDEDSNQSEEMPHVAYKEKKKLRIQCNLCKA 433
D+LLH+ VTA I +A ++ + ++E+ + ++ ++ Q NL A
Sbjct: 736 DRLLHRGVTASSFIQHATEKLQSLTQELNQSDEELEQAIKNQRNLLAA 783
>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1978
Score = 26.6 bits (56), Expect = 1.1
Identities = 14/48 (29%), Positives = 28/48 (58%)
Frame = +2
Query: 290 DKLLHQAVTADFQIDNANDEDSNQSEEMPHVAYKEKKKLRIQCNLCKA 433
D+LLH+ VTA I +A ++ + ++E+ + ++ ++ Q NL A
Sbjct: 736 DRLLHRGVTASSFIQHATEKLQSLTQELNQSDEELEQAIKNQRNLLAA 783
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 26.2 bits (55), Expect = 1.4
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Frame = +2
Query: 503 VCGKLYRKDNLIRHLQL----HSDYLPHVCQICPYRGRFYESLKIHLRTHSG 646
+CG R IR+L + H + PHV + R +L+ +R HSG
Sbjct: 729 ICGVEVRSKRSIRYLGVMLHDHLSWRPHVEMVADKALRVVRALRGIMRNHSG 780
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 25.8 bits (54), Expect = 1.9
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +2
Query: 554 HSDYLPHVCQICPYRGRFYESLKIHLRTHSGDK 652
H +LPHV ++ + +++ LR HSG K
Sbjct: 807 HLSWLPHVREVTTRARKIADAVTRLLRNHSGPK 839
>AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless
female-specific zinc-fingerC isoform protein.
Length = 593
Score = 25.4 bits (53), Expect = 2.5
Identities = 15/52 (28%), Positives = 21/52 (40%)
Frame = +2
Query: 497 CEVCGKLYRKDNLIRHLQLHSDYLPHVCQICPYRGRFYESLKIHLRTHSGDK 652
C CGK N H H+ +C CP ++L+ HLR D+
Sbjct: 529 CRSCGK--EVTNRWHHFHSHTPQRS-LCPYCPASYSRIDTLRSHLRIKHADR 577
>AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless
male-specific zinc-fingerC isoform protein.
Length = 569
Score = 25.4 bits (53), Expect = 2.5
Identities = 15/52 (28%), Positives = 21/52 (40%)
Frame = +2
Query: 497 CEVCGKLYRKDNLIRHLQLHSDYLPHVCQICPYRGRFYESLKIHLRTHSGDK 652
C CGK N H H+ +C CP ++L+ HLR D+
Sbjct: 505 CRSCGK--EVTNRWHHFHSHTPQRS-LCPYCPASYSRIDTLRSHLRIKHADR 553
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 24.6 bits (51), Expect = 4.3
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 476 QSATHLVCEVCGKLYRKDNLIRHLQLHSDYLP 571
Q A + +V +L+R+D L +LQ H LP
Sbjct: 1006 QEAARKITKVLQQLWREDELQLNLQAHLAALP 1037
>DQ342048-1|ABC69940.1| 847|Anopheles gambiae STIP protein.
Length = 847
Score = 23.4 bits (48), Expect = 9.9
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +2
Query: 515 LYRKDNLIRHLQLHSDYL 568
L+ K NLIR +L DYL
Sbjct: 378 LHEKQNLIRISELEKDYL 395
>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
cytoskeletal structural protein protein.
Length = 1645
Score = 23.4 bits (48), Expect = 9.9
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2
Query: 626 HLRTHSGDKPFSCDK 670
HL T S D+P +CD+
Sbjct: 284 HLSTSSADEPDACDR 298
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 837,987
Number of Sequences: 2352
Number of extensions: 18450
Number of successful extensions: 73
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 71
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 100882044
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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