Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_J22
         (873 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0640 - 21447470-21448309                                         29   4.9  
12_02_0635 - 21430245-21431156                                         29   4.9  
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18...    28   8.5  
02_03_0120 + 15463163-15465250                                         28   8.5  

>12_02_0640 - 21447470-21448309
          Length = 279

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = -2

Query: 845 PPRXXPXXPPPXPXXXXTPXTP 780
           PPR  P  PPP P     P TP
Sbjct: 222 PPRGRPRTPPPPPGSPKKPATP 243


>12_02_0635 - 21430245-21431156
          Length = 303

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = -2

Query: 845 PPRXXPXXPPPXPXXXXTPXTP 780
           PPR  P  PPP P     P TP
Sbjct: 219 PPRGRPRTPPPPPGSPKKPATP 240


>05_01_0028 +
           182528-183852,183967-184127,184872-185116,185330-186073
          Length = 824

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = -2

Query: 845 PPRXXPXXPPPXPXXXXTPXTPP 777
           PPR     PPP P    TP  PP
Sbjct: 81  PPRRHHRIPPPPPPLLPTPPPPP 103


>02_03_0120 + 15463163-15465250
          Length = 695

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = -2

Query: 845 PPRXXPXXPPPXPXXXXTPXTPP 777
           PP   P  PPP P     P +PP
Sbjct: 294 PPNNQPLPPPPSPSPSPPPPSPP 316


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,806,375
Number of Sequences: 37544
Number of extensions: 122350
Number of successful extensions: 840
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 430
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 749
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)