Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_J21
         (909 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_1201 - 11419851-11419913,11420090-11420311                       34   0.14 
01_01_1008 - 7987936-7988628,7988923-7989102                           31   1.3  
10_01_0038 + 437738-438122,439215-439501,440111-440375,440687-44...    30   2.2  
07_01_1097 - 10068431-10068655,10068797-10068880,10068945-100692...    30   2.9  
12_02_1063 - 25769821-25770365,25770513-25771010,25771394-25771406     29   5.1  
03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343     29   6.7  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.9  
08_02_0514 + 18021365-18022527,18023489-18023660                       28   8.9  

>07_01_1201 - 11419851-11419913,11420090-11420311
          Length = 94

 Score = 34.3 bits (75), Expect = 0.14
 Identities = 25/81 (30%), Positives = 33/81 (40%), Gaps = 3/81 (3%)
 Frame = +2

Query: 524 LRPPDEHHKNRRSSXRWRN--PTGL*RYQAFPPGKLPRALSCSDPAXYRIPVR-LSPFRE 694
           L PP           +WR+  PTG   + +FP G LP A     PA  R P   L P R 
Sbjct: 13  LLPPPPPLPALPQGQQWRSTGPTGKLCFCSFPAGALPPAAGAGQPAPDRQPATPLFPSRV 72

Query: 695 AWRXLIAHAVGISXRGXSFAP 757
           A      + + +   G +F P
Sbjct: 73  AEGLFGLNGIEVGIEGDNFTP 93


>01_01_1008 - 7987936-7988628,7988923-7989102
          Length = 290

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -2

Query: 686 REKGGQVSGXRQGRNRRAHEGAFQGETPG 600
           R  GG+V+G    R+RR   GA++GE  G
Sbjct: 246 RGGGGEVNGEEAARSRRRRRGAWEGEEEG 274


>10_01_0038 +
           437738-438122,439215-439501,440111-440375,440687-440784
          Length = 344

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 28/88 (31%), Positives = 36/88 (40%)
 Frame = -2

Query: 638 RAHEGAFQGETPGIFIVLSGFATXDLSVDFCDARQGGGAYGKTPATRPFYGSWPFAGLLL 459
           R H+  F G   G    L G +   LS      R GGG     P+TR   G     G + 
Sbjct: 213 RGHDTVFDGVYVGRRWRLGGGSDGVLSSARSGGRGGGGDDSALPSTRS-GGKGDSGGSVA 271

Query: 458 TCSFLRYPLILWITVLPPLSELIPLAAA 375
           T S  R  +     + PPLS LI +A +
Sbjct: 272 TASPHRLQMAGNPRLSPPLSPLISIAGS 299


>07_01_1097 -
           10068431-10068655,10068797-10068880,10068945-10069292,
           10069477-10069510,10069617-10070230,10079179-10079553,
           10079599-10079853,10079983-10080300
          Length = 750

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
 Frame = +1

Query: 553 STLKSXVAKPDR--TIKIPGVSPWKAPSCALLFRPCRLPD--TCPPFSLPGSVAXSHSSR 720
           S LK     P+R    +I G    K P+ +LL   C LP   + PP+ L G     +SSR
Sbjct: 468 SMLKEFYDNPNRRRAYEIVGTQK-KYPTSSLLLDYCALPHIISFPPYYLAGHCPVCNSSR 526

Query: 721 C 723
           C
Sbjct: 527 C 527


>12_02_1063 - 25769821-25770365,25770513-25771010,25771394-25771406
          Length = 351

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 18/56 (32%), Positives = 25/56 (44%)
 Frame = -2

Query: 767 QPSLXRTTYPGXRYLQREL*EXATLPGREKGGQVSGXRQGRNRRAHEGAFQGETPG 600
           +P+L      G R L+R L      PG + GG + G R GR+     G + G   G
Sbjct: 15  RPALRSAVADGGRRLRRGL--SGQRPGHDGGGGLRGWRPGRDGGGLRGRWPGRDGG 68


>03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343
          Length = 356

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
 Frame = +3

Query: 336 PLPRSLTRCARSF--GCGERYQLTQRR*YGYPQNQGITQ--ERTCEQKASKRPGTV 491
           P PRS  RC      GCG R Q TQR     P N  IT   E TC   ++  P  +
Sbjct: 150 PYPRSYYRCTHKLDQGCGARRQ-TQRC-EADPSNYDITYYGEHTCRDPSTIIPTAI 203


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +3

Query: 285 NESAN---ARGEAVCVLGALPLPRSLTRCAR 368
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>08_02_0514 + 18021365-18022527,18023489-18023660
          Length = 444

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
 Frame = +3

Query: 543 ITKID--AQVXGGE-TRQDYKDTRRFPLESSLVRSPVP 647
           ITKID  A V GG+ T Q     RR PL + +  SP+P
Sbjct: 396 ITKIDPAASVVGGKLTWQTAARPRRLPLSAKITFSPLP 433


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,277,920
Number of Sequences: 37544
Number of extensions: 497030
Number of successful extensions: 1291
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1255
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1291
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)