Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_J20
         (915 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29378-5|AAA68725.2|  355|Caenorhabditis elegans Hypothetical pr...    94   1e-19
U40061-5|AAY43979.1|  312|Caenorhabditis elegans Hypothetical pr...    78   1e-14
Z81498-2|CAB04085.1|  760|Caenorhabditis elegans Hypothetical pr...    30   2.0  
Z81498-1|CAB04086.1|  692|Caenorhabditis elegans Hypothetical pr...    30   2.0  
U12682-1|AAB63525.1|  692|Caenorhabditis elegans celfurPC protei...    30   2.0  
Z78419-2|CAB01702.1|  154|Caenorhabditis elegans Hypothetical pr...    29   3.5  

>U29378-5|AAA68725.2|  355|Caenorhabditis elegans Hypothetical
           protein F08C6.6 protein.
          Length = 355

 Score = 94.3 bits (224), Expect = 1e-19
 Identities = 50/148 (33%), Positives = 79/148 (53%)
 Frame = +1

Query: 346 FRIGIVADLDTNSKSSTKAYSFHSYLKKGHLVYNRVKNSVTVTWDSQQPTLLTSMYSHKG 525
           + I ++ DLD +SK   K   + S + +G L  +       + +D      + +  +  G
Sbjct: 57  YSIMLITDLDHDSKDGKK---WKSLVSRGFLKVSADHKHADIHFDKDSEYYVDTNIAAGG 113

Query: 526 RGMELSELIVYDGRLLTFDDRSGXVFEIISNKMVPWLVLTDGNGHVEKGFKSXWAAMKDE 705
           R MELS+L V++G+L + DDR+G +++I   K +PW++L DG G+V KGFK  W  +KD 
Sbjct: 114 RAMELSDLAVFNGKLYSIDDRTGLIYQISDKKALPWVLLNDGPGNVVKGFKGEWITVKDT 173

Query: 706 ILYXGSMGQXMDNFQWKV*XPMXPMWVK 789
            L  G +G+        V     PMWVK
Sbjct: 174 ELIVGGLGKEWTTTD-GVYVNDHPMWVK 200


>U40061-5|AAY43979.1|  312|Caenorhabditis elegans Hypothetical
           protein ZK563.7 protein.
          Length = 312

 Score = 77.8 bits (183), Expect = 1e-14
 Identities = 37/132 (28%), Positives = 73/132 (55%)
 Frame = +1

Query: 352 IGIVADLDTNSKSSTKAYSFHSYLKKGHLVYNRVKNSVTVTWDSQQPTLLTSMYSHKGRG 531
           + I+ D+D+ +K      S++S L+ G L +++ + +  + W       +TS ++   + 
Sbjct: 5   LAIITDMDSKTKQKD---SWYSTLRYGALAFSQNRTASFIHWLGG--VNITSNFNFNQKS 59

Query: 532 MELSELIVYDGRLLTFDDRSGXVFEIISNKMVPWLVLTDGNGHVEKGFKSXWAAMKDEIL 711
           ME+S+L +++ RLL+ DD+ G V+ + +   +PW++ + GNG     FK  W  +++  L
Sbjct: 60  MEMSDLKIFNNRLLSVDDKIGVVYWLRNGTAIPWVISSTGNGSSSSPFKGEWMTIRNNKL 119

Query: 712 YXGSMGQXMDNF 747
           Y GS G  +  F
Sbjct: 120 YLGSSGHELRTF 131


>Z81498-2|CAB04085.1|  760|Caenorhabditis elegans Hypothetical
           protein F11A6.1b protein.
          Length = 760

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = -2

Query: 626 TILLDIISKTXPDRSSNVSSLPS*TISSDNSIPRPLCEYMDVNKVG 489
           TIL D + +T PD S N     S  ++  ++ P P  E+ D N+ G
Sbjct: 218 TILDDGLERTHPDISPNYDERASYDVNDRDNDPMPRYEFSDENRHG 263


>Z81498-1|CAB04086.1|  692|Caenorhabditis elegans Hypothetical
           protein F11A6.1a protein.
          Length = 692

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = -2

Query: 626 TILLDIISKTXPDRSSNVSSLPS*TISSDNSIPRPLCEYMDVNKVG 489
           TIL D + +T PD S N     S  ++  ++ P P  E+ D N+ G
Sbjct: 218 TILDDGLERTHPDISPNYDERASYDVNDRDNDPMPRYEFSDENRHG 263


>U12682-1|AAB63525.1|  692|Caenorhabditis elegans celfurPC protein
           protein.
          Length = 692

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = -2

Query: 626 TILLDIISKTXPDRSSNVSSLPS*TISSDNSIPRPLCEYMDVNKVG 489
           TIL D + +T PD S N     S  ++  ++ P P  E+ D N+ G
Sbjct: 218 TILDDGLERTHPDISPNYDERASYDVNDRDNDPMPRYEFSDENRHG 263


>Z78419-2|CAB01702.1|  154|Caenorhabditis elegans Hypothetical
           protein F26A3.2 protein.
          Length = 154

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = +2

Query: 80  EQKMRGTLRDWRKALRTPITYRVGN 154
           +Q+ +GT+RD   ALRT  T  VGN
Sbjct: 19  DQRYQGTVRDQETALRTSCTLYVGN 43


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,444,052
Number of Sequences: 27780
Number of extensions: 370251
Number of successful extensions: 792
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 792
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)