Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_J19
         (917 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY187041-1|AAO39755.1|  272|Anopheles gambiae putative antennal ...    33   0.012
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    24   5.6  
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    23   9.8  

>AY187041-1|AAO39755.1|  272|Anopheles gambiae putative antennal
           carrier protein TOL-1 protein.
          Length = 272

 Score = 33.1 bits (72), Expect = 0.012
 Identities = 21/87 (24%), Positives = 46/87 (52%)
 Frame = +2

Query: 392 NKLKHSGEVTLRIEKLKINLNNKYTGEIKMVFPKLMVIADYDVRGSRILTLDINGKGKLR 571
           +K+  +G  + ++ +  ++  N +  E  +  PK+ +  +Y ++G RIL + +NG GK  
Sbjct: 105 SKVVVTGFASTKVLRNVVSSKN-FGWETHIRLPKMRLEGNYHMQG-RILVIPLNGHGKCW 162

Query: 572 GEFTGITVVAKGLAKPIQKDGVEYLQV 652
            E +G+ ++ +      QK+G  +  V
Sbjct: 163 FEPSGMDIIMRTSTDLYQKNGHVFYNV 189


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 24.2 bits (50), Expect = 5.6
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +2

Query: 602 KGLAKPIQKDGVEYLQVDKILTRVRVSNAQ 691
           K L KP + + VEYL+ +  LTR R    Q
Sbjct: 284 KDLEKP-KTEAVEYLKQENTLTRTRNQQIQ 312


>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
            symporter protein.
          Length = 1127

 Score = 23.4 bits (48), Expect = 9.8
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -3

Query: 747  KNDAADAAASGLSVSSK 697
            K+DAADA+ +G S  SK
Sbjct: 1035 KDDAADASTAGTSTISK 1051


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 877,821
Number of Sequences: 2352
Number of extensions: 16555
Number of successful extensions: 75
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 75
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 99641691
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)