Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_J19
         (917 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    24   2.2  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    23   2.9  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    22   6.8  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    22   6.8  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    22   6.8  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     22   9.0  

>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +3

Query: 675 ELVMPRSVSMTRKDHWLPHRLR 740
           ++ M  SV +T ++ WL  RLR
Sbjct: 75  DVTMEYSVQLTFREQWLDERLR 96


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +3

Query: 675 ELVMPRSVSMTRKDHWLPHRLR 740
           ++ M  SV +T ++ WL  RLR
Sbjct: 75  DIKMEYSVQLTFREQWLDERLR 96


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = -3

Query: 909 IINPRFLCGWYVINEYFVQGYVSK 838
           ++ P FL GWY   +  +  ++ K
Sbjct: 75  LLRPNFLDGWYQTLQSAISAHMKK 98


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = -3

Query: 909 IINPRFLCGWYVINEYFVQGYVSK 838
           ++ P FL GWY   +  +  ++ K
Sbjct: 75  LLRPNFLDGWYQTLQSAISAHMKK 98


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = -3

Query: 909 IINPRFLCGWYVINEYFVQGYVSK 838
           ++ P FL GWY   +  +  ++ K
Sbjct: 75  LLRPNFLDGWYQTLQSAISAHMKK 98


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +1

Query: 541 PGHKWKRKTQRRIHWNNSG 597
           P  KW RK   R  W+ SG
Sbjct: 153 PECKWSRKGFLRTRWSISG 171


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 231,496
Number of Sequences: 438
Number of extensions: 4375
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29871933
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)