Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_J18
(769 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0686 - 30900748-30902167,30903442-30904742 35 0.082
11_01_0687 - 5651002-5651453,5651535-5651951,5652621-5653338,565... 33 0.33
10_08_0095 + 14760292-14760624,14760689-14761000,14761768-147624... 33 0.33
04_01_0222 - 2805329-2805780,2805866-2806611,2806730-2806778,280... 33 0.33
03_05_0361 - 23448459-23448910,23448990-23449406,23449542-234497... 33 0.33
07_03_0698 - 20765305-20768526 30 1.8
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 29 3.1
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 29 3.1
11_03_0103 + 10030099-10030386 29 4.1
05_01_0142 - 940421-940701,941262-941574 29 4.1
04_04_0212 + 23646043-23646369,23646457-23647304,23647409-23649158 29 5.4
04_01_0500 - 6540769-6541482,6541819-6541877,6541965-6542064,654... 29 5.4
03_01_0164 - 1326002-1326409,1326410-1326428,1326523-1326647,132... 29 5.4
12_01_0347 + 2658545-2659309 28 7.1
06_03_1004 - 26832638-26833183,26833373-26833569,26833636-268338... 28 9.4
01_03_0005 + 11568545-11569119,11569179-11569191 28 9.4
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 34.7 bits (76), Expect = 0.082
Identities = 18/50 (36%), Positives = 21/50 (42%)
Frame = +3
Query: 384 PRGEXXXRGGGXPPPLXXEKXGGGNPPPXXKXXXKKXXPXPPPXGGGXKK 533
P+G PPP K G +PPP KK P PPP GG +
Sbjct: 341 PKGPPPPPPAKGPPPPPPPK--GPSPPPPPPPGGKKGGPPPPPPKGGASR 388
>11_01_0687 -
5651002-5651453,5651535-5651951,5652621-5653338,
5654106-5654417,5654482-5654814
Length = 743
Score = 32.7 bits (71), Expect = 0.33
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +3
Query: 357 GXXEPXFGGPRGEXXXRGGGXPPPLXXEKXGGGNPPP 467
G +P + G G+ G G PPP + GGG PPP
Sbjct: 409 GGGQPGYEGGTGQQRY-GVGAPPPTGQQGYGGGVPPP 444
>10_08_0095 +
14760292-14760624,14760689-14761000,14761768-14762489,
14762905-14763187,14763419-14763650,14763736-14764187
Length = 777
Score = 32.7 bits (71), Expect = 0.33
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +3
Query: 357 GXXEPXFGGPRGEXXXRGGGXPPPLXXEKXGGGNPPP 467
G +P + G G+ G G PPP + GGG PPP
Sbjct: 409 GGGQPGYEGGTGQQRY-GVGAPPPTGQQGYGGGVPPP 444
>04_01_0222 -
2805329-2805780,2805866-2806611,2806730-2806778,
2807031-2807748,2808513-2808824
Length = 758
Score = 32.7 bits (71), Expect = 0.33
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +3
Query: 357 GXXEPXFGGPRGEXXXRGGGXPPPLXXEKXGGGNPPP 467
G +P + G G+ G G PPP + GGG PPP
Sbjct: 298 GGGQPGYEGGTGQQCY-GVGAPPPTGQQGYGGGVPPP 333
>03_05_0361 -
23448459-23448910,23448990-23449406,23449542-23449735,
23449854-23449902,23450155-23450539,23450578-23450874,
23451650-23451961
Length = 701
Score = 32.7 bits (71), Expect = 0.33
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +3
Query: 357 GXXEPXFGGPRGEXXXRGGGXPPPLXXEKXGGGNPPP 467
G +P + G G+ G G PPP + GGG PPP
Sbjct: 286 GGGQPGYEGGTGQQRY-GVGAPPPTGQQGYGGGVPPP 321
>07_03_0698 - 20765305-20768526
Length = 1073
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/44 (36%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Frame = +3
Query: 408 GGGXPPPLXXEKXGGGN--PPPXXKXXXKKXXPXPPPXGGGXKK 533
GG PL + GG PPP K P P GGG K+
Sbjct: 292 GGDKEQPLPLQSEGGDKEQPPPLQSEGGDKEQPPPLQSGGGIKQ 335
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = +3
Query: 411 GGXPPPLXXEKXGGGNPPPXXKXXXKKXXPXPPPXGG 521
G PPP G G PPP P PPP GG
Sbjct: 1096 GVAPPP---PSIGAGAPPPPPPPGGITGVPPPPPIGG 1129
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +3
Query: 411 GGXPPPLXXEKXGGGNPPPXXKXXXKKXXPXPPPXGGG 524
GG P P GG PPP P PPP G G
Sbjct: 1158 GGPPAPPPPAGFRGGTPPPNAHGGV--APPPPPPRGHG 1193
Score = 28.3 bits (60), Expect = 7.1
Identities = 29/99 (29%), Positives = 30/99 (30%), Gaps = 7/99 (7%)
Frame = -3
Query: 524 PPPXXGGXGXXFFXXX--FXXG-GGVXPPXFFPXKXGGXXPPPXXXF----PPGAPKXGF 366
PPP GG G G GGV PP G PPP F PP G
Sbjct: 1123 PPPPIGGLGGHQAPPAPPLPEGIGGVPPPPPVGGLGGPPAPPPPAGFRGGTPPPNAHGGV 1182
Query: 365 XXPPNFWXXXGFLGXVPQIXXXXXXXXXXXXFLGVPPTP 249
PP G +G P G PP P
Sbjct: 1183 APPPPPPRGHGGVGGPPTPPGAPAPPMPPGVPGGPPPPP 1221
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +3
Query: 408 GGGXPPPLXXEKXGGGNPPPXXKXXXKKXXPXPP 509
G G PPP GGG PPP + PP
Sbjct: 367 GPGPPPPPGAAGRGGGGPPPPALPGGPRARGPPP 400
>11_03_0103 + 10030099-10030386
Length = 95
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/47 (34%), Positives = 19/47 (40%)
Frame = +3
Query: 324 SQKPXXXPKIWGXXEPXFGGPRGEXXXRGGGXPPPLXXEKXGGGNPP 464
S + P + P GG GE GGG E+ G GNPP
Sbjct: 18 SPRSGGGPPLLSFTPPDLGG--GEEGNGGGGATAATTAEEGGDGNPP 62
>05_01_0142 - 940421-940701,941262-941574
Length = 197
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Frame = -3
Query: 452 PPXFFPXKXGGXXPPPXXXFPP--GAPKXGFXXPPNFWXXXG 333
PP +P G PPP +PP G P+ G PP + G
Sbjct: 50 PPGAYPPPPGAYPPPP-GAYPPQHGYPQPGGYPPPGGYPQHG 90
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
Frame = -3
Query: 452 PPXFFPXKXGGXXPPP-XXXFPPGA--PKXGFXXPPNFWXXXGF 330
PP +P G PPP PPGA P+ G+ P + G+
Sbjct: 43 PPGAYPPPPGAYPPPPGAYPPPPGAYPPQHGYPQPGGYPPPGGY 86
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/49 (32%), Positives = 18/49 (36%), Gaps = 3/49 (6%)
Frame = +3
Query: 384 PRGEXXXRGGGXPPPLXXEKXGGGNPPPXXKXXXKKXXPXP---PPXGG 521
P+G G PPP G PPP + P P PP GG
Sbjct: 37 PQGYPPPPGAYPPPPGAYPPPPGAYPPPPGAYPPQHGYPQPGGYPPPGG 85
>04_04_0212 + 23646043-23646369,23646457-23647304,23647409-23649158
Length = 974
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/50 (34%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
Frame = +3
Query: 378 GGPRGEXXXRGGGXPPPLXXEKXGGGNPPPXXKXXXKKXXPXP-PPXGGG 524
G RGE GGG GG P ++ P P PP GGG
Sbjct: 289 GSRRGEQSTPGGGRASGPRDGGPGGSRPADARGKRKQEDTPSPSPPRGGG 338
>04_01_0500 -
6540769-6541482,6541819-6541877,6541965-6542064,
6542113-6542322,6542507-6542765,6544022-6544215
Length = 511
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/44 (38%), Positives = 19/44 (43%)
Frame = +3
Query: 381 GPRGEXXXRGGGXPPPLXXEKXGGGNPPPXXKXXXKKXXPXPPP 512
GP+GE RG G PPP PPP + P PPP
Sbjct: 21 GPQGE---RGAGEPPPPLP-------PPPPGPLQRRSSLPPPPP 54
>03_01_0164 -
1326002-1326409,1326410-1326428,1326523-1326647,
1327482-1327530,1328834-1328855,1328969-1329071
Length = 241
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = -3
Query: 452 PPXFFPXKXGGXXPPPXXXFPPGA-PKXGFXXPP 354
PP +P GG PPP PPG+ P G PP
Sbjct: 204 PPAGYPQ--GGAYPPPGSYPPPGSYPPQGSYPPP 235
>12_01_0347 + 2658545-2659309
Length = 254
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 5/36 (13%)
Frame = -3
Query: 467 GGGVXPPXFFP--XKXGGXXPPPXXXFP---PGAPK 375
GGG PP FP K GG P P PG+PK
Sbjct: 93 GGGFRPPAIFPKKAKTGGGGRTPRAAVPDHEPGSPK 128
>06_03_1004 -
26832638-26833183,26833373-26833569,26833636-26833861,
26833943-26834072,26835884-26836188
Length = 467
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +3
Query: 408 GGGXPPPLXXEKXGGGNP 461
GGG PP E GGGNP
Sbjct: 63 GGGRPPARGREGGGGGNP 80
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 27.9 bits (59), Expect = 9.4
Identities = 21/74 (28%), Positives = 25/74 (33%)
Frame = -3
Query: 530 FXPPPXXGGXGXXFFXXXFXXGGGVXPPXFFPXKXGGXXPPPXXXFPPGAPKXGFXXPPN 351
+ PPP GG G GGG P PPP F P P + PP
Sbjct: 112 YYPPPTGGGGGGGGGWQQGGGGGGAYPT-----------PPPPNPFLPYFPFYYYSPPPP 160
Query: 350 FWXXXGFLGXVPQI 309
F+ + V I
Sbjct: 161 FYSSGSSVAGVSAI 174
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,563,893
Number of Sequences: 37544
Number of extensions: 445295
Number of successful extensions: 985
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 831
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2063219900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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