Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_J18
(769 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 35 0.073
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 35 0.073
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 35 0.073
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 34 0.097
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 34 0.097
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 33 0.22
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 32 0.52
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 31 0.68
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 1.6
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 1.6
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 1.6
AL132860-3|CAB60514.2| 342|Caenorhabditis elegans Hypothetical ... 30 2.1
U97193-15|AAB52443.1| 1932|Caenorhabditis elegans Hypothetical p... 26 3.0
AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical ... 29 3.6
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 4.8
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 4.8
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 29 4.8
AF016430-2|AAB65371.1| 1106|Caenorhabditis elegans Gex interacti... 28 6.4
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 28 8.4
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 28 8.4
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 28 8.4
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 28 8.4
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 34.7 bits (76), Expect = 0.073
Identities = 23/65 (35%), Positives = 23/65 (35%), Gaps = 2/65 (3%)
Frame = +3
Query: 333 PXXXPKIWGXXEPXFGGPRGEXXXRGGGXPPPLXX--EKXGGGNPPPXXKXXXKKXXPXP 506
P P I G P P G GG PPP GG PPP P P
Sbjct: 716 PPGLPPITGGPPPP-PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 774
Query: 507 PPXGG 521
PP GG
Sbjct: 775 PPPGG 779
Score = 31.9 bits (69), Expect = 0.52
Identities = 22/63 (34%), Positives = 22/63 (34%)
Frame = +3
Query: 333 PXXXPKIWGXXEPXFGGPRGEXXXRGGGXPPPLXXEKXGGGNPPPXXKXXXKKXXPXPPP 512
P P I G P P G GG PPP G PPP K P PPP
Sbjct: 732 PGGLPPITGGPPPP--PPPGGLPPISGGPPPP-PPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Query: 513 XGG 521
G
Sbjct: 789 PPG 791
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 3/40 (7%)
Frame = +3
Query: 411 GGXPPPLXXEKXGGGNPPPXXKXXXKK---XXPXPPPXGG 521
GG PPP GG PPP P PPP GG
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGG 750
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/50 (36%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
Frame = +3
Query: 378 GGPRGEXXXRGGGXPPPLXXEKXGGGNPPPXXKXXXK-KXXPXPPPXGGG 524
GG GG PPP GG PPP P PPP GG
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGG 750
Score = 28.7 bits (61), Expect = 4.8
Identities = 22/57 (38%), Positives = 22/57 (38%)
Frame = -3
Query: 524 PPPXXGGXGXXFFXXXFXXGGGVXPPXFFPXKXGGXXPPPXXXFPPGAPKXGFXXPP 354
PPP GG GG PP P GG PPP PPG K G PP
Sbjct: 744 PPPPPGGLPPI--------SGGPPPP---PPPPGGCPPPPPP-PPPGGFKGGPPPPP 788
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 34.7 bits (76), Expect = 0.073
Identities = 23/65 (35%), Positives = 23/65 (35%), Gaps = 2/65 (3%)
Frame = +3
Query: 333 PXXXPKIWGXXEPXFGGPRGEXXXRGGGXPPPLXX--EKXGGGNPPPXXKXXXKKXXPXP 506
P P I G P P G GG PPP GG PPP P P
Sbjct: 716 PPGLPPITGGPPPP-PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 774
Query: 507 PPXGG 521
PP GG
Sbjct: 775 PPPGG 779
Score = 31.9 bits (69), Expect = 0.52
Identities = 22/63 (34%), Positives = 22/63 (34%)
Frame = +3
Query: 333 PXXXPKIWGXXEPXFGGPRGEXXXRGGGXPPPLXXEKXGGGNPPPXXKXXXKKXXPXPPP 512
P P I G P P G GG PPP G PPP K P PPP
Sbjct: 732 PGGLPPITGGPPPP--PPPGGLPPISGGPPPP-PPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Query: 513 XGG 521
G
Sbjct: 789 PPG 791
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 3/40 (7%)
Frame = +3
Query: 411 GGXPPPLXXEKXGGGNPPPXXKXXXKK---XXPXPPPXGG 521
GG PPP GG PPP P PPP GG
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGG 750
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/50 (36%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
Frame = +3
Query: 378 GGPRGEXXXRGGGXPPPLXXEKXGGGNPPPXXKXXXK-KXXPXPPPXGGG 524
GG GG PPP GG PPP P PPP GG
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGG 750
Score = 28.7 bits (61), Expect = 4.8
Identities = 22/57 (38%), Positives = 22/57 (38%)
Frame = -3
Query: 524 PPPXXGGXGXXFFXXXFXXGGGVXPPXFFPXKXGGXXPPPXXXFPPGAPKXGFXXPP 354
PPP GG GG PP P GG PPP PPG K G PP
Sbjct: 744 PPPPPGGLPPI--------SGGPPPP---PPPPGGCPPPPPP-PPPGGFKGGPPPPP 788
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 34.7 bits (76), Expect = 0.073
Identities = 23/65 (35%), Positives = 23/65 (35%), Gaps = 2/65 (3%)
Frame = +3
Query: 333 PXXXPKIWGXXEPXFGGPRGEXXXRGGGXPPPLXX--EKXGGGNPPPXXKXXXKKXXPXP 506
P P I G P P G GG PPP GG PPP P P
Sbjct: 299 PPGLPPITGGPPPP-PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 357
Query: 507 PPXGG 521
PP GG
Sbjct: 358 PPPGG 362
Score = 31.9 bits (69), Expect = 0.52
Identities = 22/63 (34%), Positives = 22/63 (34%)
Frame = +3
Query: 333 PXXXPKIWGXXEPXFGGPRGEXXXRGGGXPPPLXXEKXGGGNPPPXXKXXXKKXXPXPPP 512
P P I G P P G GG PPP G PPP K P PPP
Sbjct: 315 PGGLPPITGGPPPP--PPPGGLPPISGGPPPP-PPPPGGCPPPPPPPPPGGFKGGPPPPP 371
Query: 513 XGG 521
G
Sbjct: 372 PPG 374
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 3/40 (7%)
Frame = +3
Query: 411 GGXPPPLXXEKXGGGNPPPXXKXXXKK---XXPXPPPXGG 521
GG PPP GG PPP P PPP GG
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGG 333
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/50 (36%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
Frame = +3
Query: 378 GGPRGEXXXRGGGXPPPLXXEKXGGGNPPPXXKXXXK-KXXPXPPPXGGG 524
GG GG PPP GG PPP P PPP GG
Sbjct: 284 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGG 333
Score = 28.7 bits (61), Expect = 4.8
Identities = 22/57 (38%), Positives = 22/57 (38%)
Frame = -3
Query: 524 PPPXXGGXGXXFFXXXFXXGGGVXPPXFFPXKXGGXXPPPXXXFPPGAPKXGFXXPP 354
PPP GG GG PP P GG PPP PPG K G PP
Sbjct: 327 PPPPPGGLPPI--------SGGPPPP---PPPPGGCPPPPPP-PPPGGFKGGPPPPP 371
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 34.3 bits (75), Expect = 0.097
Identities = 23/62 (37%), Positives = 24/62 (38%), Gaps = 2/62 (3%)
Frame = -3
Query: 533 FFXPPPXXGGXGXXFFXXXFXXGGGVXPPXFFPXKXGGXXPPPXXX--FPPGAPKXGFXX 360
FF PPP G F GG+ PP P GG PPP PP P G
Sbjct: 63 FFIPPPVPNG-----FIPPPPGPGGIPPPP--PMFAGGIPPPPPMMGGIPPPPPMFGAPP 115
Query: 359 PP 354
PP
Sbjct: 116 PP 117
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 34.3 bits (75), Expect = 0.097
Identities = 23/60 (38%), Positives = 25/60 (41%), Gaps = 4/60 (6%)
Frame = -1
Query: 586 GAPPPFXXXFXKKKXXXXFFXPPPXGGGXGXFFXKXXFXXG----GGXPPPXFSXKXGGG 419
GAPPP F + F PPP GG F G GG PPP F + GGG
Sbjct: 754 GAPPP---PFGRGAGPMSSFPPPPRGG-MHHMPPPPSFRGGRGGHGGPPPPHFDRRGGGG 809
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +3
Query: 369 PXFGGPRGEXXXRGGGXPPPLXXEKXGGGNPP 464
P F G RG G G PPP ++ GGG PP
Sbjct: 785 PSFRGGRG-----GHGGPPPPHFDRRGGGGPP 811
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/35 (34%), Positives = 14/35 (40%)
Frame = +3
Query: 420 PPPLXXEKXGGGNPPPXXKXXXKKXXPXPPPXGGG 524
PPP+ + G PPP PPP GG
Sbjct: 743 PPPMFQQGFNAGAPPPPFGRGAGPMSSFPPPPRGG 777
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 33.1 bits (72), Expect = 0.22
Identities = 19/59 (32%), Positives = 21/59 (35%)
Frame = -3
Query: 530 FXPPPXXGGXGXXFFXXXFXXGGGVXPPXFFPXKXGGXXPPPXXXFPPGAPKXGFXXPP 354
+ PPP G + GG PP P G PPP P GAP G P
Sbjct: 409 YGPPPPGGPGAPGSYGPPQGGPGGFGPPP--PGGPGAYGPPPTGFPPVGAPPPGAAGAP 465
Score = 30.3 bits (65), Expect = 1.6
Identities = 21/70 (30%), Positives = 24/70 (34%), Gaps = 1/70 (1%)
Frame = +3
Query: 315 GNXSQKPXXXPK-IWGXXEPXFGGPRGEXXXRGGGXPPPLXXEKXGGGNPPPXXKXXXKK 491
GN + P P + FG P+G G G PPP G PP
Sbjct: 376 GNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGF-- 433
Query: 492 XXPXPPPXGG 521
PPP GG
Sbjct: 434 ---GPPPPGG 440
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 31.9 bits (69), Expect = 0.52
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +3
Query: 420 PPPLXXEKXGGGNPPPXXKXXXKKXXPXPPPXGG 521
PPPL G PPP P PPP GG
Sbjct: 565 PPPLPQNLSGAPPPPPPPPPMLGGPPPPPPPPGG 598
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +3
Query: 420 PPPLXXEKXGGGNPPPXXKXXXKKXXPXPPPXGGG 524
PPP + G PPP P PPP GG
Sbjct: 564 PPPPLPQNLSGAPPPPPPPPPMLGGPPPPPPPPGG 598
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 31.5 bits (68), Expect = 0.68
Identities = 21/56 (37%), Positives = 23/56 (41%), Gaps = 4/56 (7%)
Frame = +3
Query: 369 PXFGGPRGEXXXRGGGXP----PPLXXEKXGGGNPPPXXKXXXKKXXPXPPPXGGG 524
P GG G GG P PPL + GG PPP + P PP GGG
Sbjct: 1438 PVMGGHEGSWR---GGPPMRGMPPLGMMRGRGGPPPPRGMNSPMRGMP-PPMRGGG 1489
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/49 (34%), Positives = 19/49 (38%), Gaps = 3/49 (6%)
Frame = +3
Query: 384 PRGEXXXRGGGXPPPLXXEKXGGGNPPP---XXKXXXKKXXPXPPPXGG 521
P+G G G PPP G+PPP P PPP GG
Sbjct: 243 PKGSPPLAGSGSPPP----PPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 287
Score = 27.9 bits (59), Expect = 8.4
Identities = 18/60 (30%), Positives = 19/60 (31%)
Frame = +3
Query: 345 PKIWGXXEPXFGGPRGEXXXRGGGXPPPLXXEKXGGGNPPPXXKXXXKKXXPXPPPXGGG 524
P+ P G P GG PPP G PPP PPP GG
Sbjct: 267 PRTGSPPPPPTGSP--PPPPAGGSPPPP-----RAGSPPPPPPPRGSPPTGSLPPPQAGG 319
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/49 (34%), Positives = 19/49 (38%), Gaps = 3/49 (6%)
Frame = +3
Query: 384 PRGEXXXRGGGXPPPLXXEKXGGGNPPP---XXKXXXKKXXPXPPPXGG 521
P+G G G PPP G+PPP P PPP GG
Sbjct: 264 PKGSPPLAGSGSPPP----PPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 308
Score = 27.9 bits (59), Expect = 8.4
Identities = 18/60 (30%), Positives = 19/60 (31%)
Frame = +3
Query: 345 PKIWGXXEPXFGGPRGEXXXRGGGXPPPLXXEKXGGGNPPPXXKXXXKKXXPXPPPXGGG 524
P+ P G P GG PPP G PPP PPP GG
Sbjct: 288 PRTGSPPPPPTGSP--PPPPAGGSPPPP-----RAGSPPPPPPPRGSPPTGSLPPPQAGG 340
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/49 (34%), Positives = 19/49 (38%), Gaps = 3/49 (6%)
Frame = +3
Query: 384 PRGEXXXRGGGXPPPLXXEKXGGGNPPP---XXKXXXKKXXPXPPPXGG 521
P+G G G PPP G+PPP P PPP GG
Sbjct: 249 PKGSPPLAGSGSPPP----PPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 293
Score = 27.9 bits (59), Expect = 8.4
Identities = 18/60 (30%), Positives = 19/60 (31%)
Frame = +3
Query: 345 PKIWGXXEPXFGGPRGEXXXRGGGXPPPLXXEKXGGGNPPPXXKXXXKKXXPXPPPXGGG 524
P+ P G P GG PPP G PPP PPP GG
Sbjct: 273 PRTGSPPPPPTGSP--PPPPAGGSPPPP-----RAGSPPPPPPPRGSPPTGSLPPPQAGG 325
>AL132860-3|CAB60514.2| 342|Caenorhabditis elegans Hypothetical
protein Y56A3A.4 protein.
Length = 342
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +3
Query: 381 GPRGEXXXRGGGXPPPLXXEKXGGGNPP 464
GP G GG PP ++ GGG PP
Sbjct: 139 GPSGHLMGMVGGPPPQHMMQQQGGGGPP 166
>U97193-15|AAB52443.1| 1932|Caenorhabditis elegans Hypothetical
protein C06A5.1 protein.
Length = 1932
Score = 25.8 bits (54), Expect(2) = 3.0
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 375 FGGPRGEXXXRGGGXPP 425
FGG R RGGG PP
Sbjct: 1722 FGGKRSAGDRRGGGPPP 1738
Score = 21.8 bits (44), Expect(2) = 3.0
Identities = 8/23 (34%), Positives = 11/23 (47%)
Frame = +3
Query: 438 EKXGGGNPPPXXKXXXKKXXPXP 506
++ GGG PP + K P P
Sbjct: 1730 DRRGGGPPPKKGRFISAKDLPVP 1752
>AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical
protein R12E2.6 protein.
Length = 74
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/34 (41%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Frame = +3
Query: 420 PPPLXXEKXGGG-NPPPXXKXXXKKXXPXPPPXG 518
PPP GGG PPP P PPP G
Sbjct: 35 PPPACGNPCGGGFGPPPPPFGPVGYALPPPPPNG 68
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +3
Query: 408 GGGXPPPLXXEKXGGGNPPP 467
GGG PPL + G G PPP
Sbjct: 805 GGGMYPPLIPTRPGPGGPPP 824
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/59 (28%), Positives = 19/59 (32%)
Frame = -3
Query: 530 FXPPPXXGGXGXXFFXXXFXXGGGVXPPXFFPXKXGGXXPPPXXXFPPGAPKXGFXXPP 354
F PP G + G PP +P G PPP PP P PP
Sbjct: 325 FGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPP 383
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/59 (28%), Positives = 19/59 (32%)
Frame = -3
Query: 530 FXPPPXXGGXGXXFFXXXFXXGGGVXPPXFFPXKXGGXXPPPXXXFPPGAPKXGFXXPP 354
F PP G + G PP +P G PPP PP P PP
Sbjct: 335 FGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPP 393
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +3
Query: 408 GGGXPPPLXXEKXGGGNPPP 467
GGG PPL + G G PPP
Sbjct: 805 GGGMYPPLIPTRPGPGGPPP 824
>AF016430-2|AAB65371.1| 1106|Caenorhabditis elegans Gex interacting
protein protein 6 protein.
Length = 1106
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Frame = -3
Query: 467 GGGVXPPXFFPXKXGGXXPPPXXX-FPPGAPKXGFXXPPN 351
G G PP P PP FPP P G+ PPN
Sbjct: 1058 GNGFYPPQ--PRDFSPPQPPQQSRMFPPSQPPFGYAGPPN 1095
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = +3
Query: 420 PPPLXXEKXGGGNPPPXXKXXXKKXXPXPPPXGGG 524
PPP+ G G PPP P PPP G G
Sbjct: 636 PPPMGLPAVGAGAPPP---------PPPPPPSGAG 661
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = +3
Query: 420 PPPLXXEKXGGGNPPPXXKXXXKKXXPXPPPXGGG 524
PPP+ G G PPP P PPP G G
Sbjct: 462 PPPMGLPAVGAGAPPP---------PPPPPPSGAG 487
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/57 (33%), Positives = 21/57 (36%), Gaps = 2/57 (3%)
Frame = -3
Query: 533 FFXPPPXXGGXGXXFFXXXFXXGGGVXPPXFFPXK--XGGXXPPPXXXFPPGAPKXG 369
F+ P GG G + GGG P P GG PPP PP P G
Sbjct: 632 FYTSPGARGGAGAKANKGWYGSGGGSSMPMPVPPPGGLGGFMPPP----PPPPPMPG 684
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/57 (33%), Positives = 21/57 (36%), Gaps = 2/57 (3%)
Frame = -3
Query: 533 FFXPPPXXGGXGXXFFXXXFXXGGGVXPPXFFPXK--XGGXXPPPXXXFPPGAPKXG 369
F+ P GG G + GGG P P GG PPP PP P G
Sbjct: 632 FYTSPGARGGAGAKANKGWYGSGGGSSMPMPVPPPGGLGGFMPPP----PPPPPMPG 684
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,994,655
Number of Sequences: 27780
Number of extensions: 252858
Number of successful extensions: 719
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 284
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 531
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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