Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_J16
         (924 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058248-1|AAL13477.1|  320|Drosophila melanogaster GH01229p pro...   169   5e-42
AE014297-2466|AAF55514.2|  320|Drosophila melanogaster CG7993-PA...   169   5e-42
AY118353-1|AAM48382.1|  488|Drosophila melanogaster RE01052p pro...    33   0.42 
AE014296-1305|AAF50525.3| 1571|Drosophila melanogaster CG7462-PB...    32   1.3  
AL024484-8|CAA19673.1|  301|Drosophila melanogaster EG:96G10.6,F...    29   9.0  

>AY058248-1|AAL13477.1|  320|Drosophila melanogaster GH01229p
           protein.
          Length = 320

 Score =  169 bits (411), Expect = 5e-42
 Identities = 84/169 (49%), Positives = 111/169 (65%)
 Frame = +2

Query: 275 LQRIKKPTTRKGKKVLLSKEPKPIEGPKQSIFLQGRNPSERTRKLLKDIYDLKKPDAAYL 454
           L RI+KP TRKGKKVLL++EP+ IE  +  +FL GR      +  +KD+  LKKP    L
Sbjct: 3   LLRIRKPKTRKGKKVLLAREPQLIESARTMLFLDGRKCGGNVKLCMKDLQALKKPLVKVL 62

Query: 455 SRKNDFVPFEDSSLIEKLCYKKEAALFGVGSHSKKRPHNIVLGRTFDYGILDMIELGAEE 634
           +RKND  PF+D S +E L  K +AALF  GS SKKRP NI+LGR F+  +LDM ELG + 
Sbjct: 63  NRKNDITPFDDPSSLEFLTMKNDAALFTFGSTSKKRPDNIILGRIFENEVLDMFELGIKR 122

Query: 635 YKAMSEFHNIKVLAGSKPCLLFNGPAWELNQDLND*SHCSLISFTEKKV 781
           Y+A+SEF N K+ A  KPCL+FNGP W   ++L    +  + +F  +KV
Sbjct: 123 YQAISEFKNEKIGACVKPCLVFNGPKWAQTEELRRLRNLFIDTFQREKV 171



 Score = 58.4 bits (135), Expect = 1e-08
 Identities = 32/65 (49%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
 Frame = +1

Query: 733 KRLKSLFSDFFHREKGETIXLQGLXHVLSFTATDDGLIYFXSYXISLKKVA-KNXQXGXE 909
           +RL++LF D F REK ++I LQG+ HVLSFT  DD  I   SY I LKK   +  +   E
Sbjct: 156 RRLRNLFIDTFQREKVDSIRLQGIEHVLSFTVIDDMNILMRSYRILLKKSGQRTPRIELE 215

Query: 910 KIXPS 924
           +I PS
Sbjct: 216 EIGPS 220


>AE014297-2466|AAF55514.2|  320|Drosophila melanogaster CG7993-PA
           protein.
          Length = 320

 Score =  169 bits (411), Expect = 5e-42
 Identities = 84/169 (49%), Positives = 111/169 (65%)
 Frame = +2

Query: 275 LQRIKKPTTRKGKKVLLSKEPKPIEGPKQSIFLQGRNPSERTRKLLKDIYDLKKPDAAYL 454
           L RI+KP TRKGKKVLL++EP+ IE  +  +FL GR      +  +KD+  LKKP    L
Sbjct: 3   LLRIRKPKTRKGKKVLLAREPQLIESARTMLFLDGRKCGGNVKLCMKDLQALKKPLVKVL 62

Query: 455 SRKNDFVPFEDSSLIEKLCYKKEAALFGVGSHSKKRPHNIVLGRTFDYGILDMIELGAEE 634
           +RKND  PF+D S +E L  K +AALF  GS SKKRP NI+LGR F+  +LDM ELG + 
Sbjct: 63  NRKNDITPFDDPSSLEFLTMKNDAALFTFGSTSKKRPDNIILGRIFENEVLDMFELGIKR 122

Query: 635 YKAMSEFHNIKVLAGSKPCLLFNGPAWELNQDLND*SHCSLISFTEKKV 781
           Y+A+SEF N K+ A  KPCL+FNGP W   ++L    +  + +F  +KV
Sbjct: 123 YQAISEFKNEKIGACVKPCLVFNGPKWAQTEELRRLRNLFIDTFQREKV 171



 Score = 60.9 bits (141), Expect = 2e-09
 Identities = 33/65 (50%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
 Frame = +1

Query: 733 KRLKSLFSDFFHREKGETIXLQGLXHVLSFTATDDGLIYFXSYXISLKKVA-KNXQXGXE 909
           +RL++LF D F REK ++I LQG+ HVLSFT TDD  I   SY I LKK   +  +   E
Sbjct: 156 RRLRNLFIDTFQREKVDSIRLQGIEHVLSFTVTDDMNILMRSYRILLKKSGQRTPRIELE 215

Query: 910 KIXPS 924
           +I PS
Sbjct: 216 EIGPS 220


>AY118353-1|AAM48382.1|  488|Drosophila melanogaster RE01052p
           protein.
          Length = 488

 Score = 33.5 bits (73), Expect = 0.42
 Identities = 27/99 (27%), Positives = 41/99 (41%), Gaps = 7/99 (7%)
 Frame = -2

Query: 668 LLYCEILTLPYILQHQVQSYPIFHNQKFYPKQC----CGGASCCVNQHQTELPLFCNITS 501
           L  C + T+ ++L+HQ++S    H+     K C    C    C  N+  +     C+  S
Sbjct: 368 LAICHLATMNHVLRHQLRSRTSSHSNSCSSKSCSSNKCSSNKCSSNRCSSNK---CSSNS 424

Query: 500 -QSNYCL--QMGQNRFCG*DKRRQAFLNHRYPLVAFLSF 393
             SN C   +   NR+      R   L HR PL   + F
Sbjct: 425 CSSNRCSSNKCSSNRY---SSNRCMLLLHRQPLAILVPF 460


>AE014296-1305|AAF50525.3| 1571|Drosophila melanogaster CG7462-PB,
            isoform B protein.
          Length = 1571

 Score = 31.9 bits (69), Expect = 1.3
 Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
 Frame = +2

Query: 155  VVVCPNSSMYLIMSGSN*PSLK-GDPRPRVFLKFNVNKMPVLQRIKKPTTRKGKKVLLSK 331
            V V      Y+ M+G+  P  K GD     F  F  N++P   R+K        + L  K
Sbjct: 1302 VEVLEGKPQYIEMAGNLVPVTKSGDQLQVQFKAFRENRLPFTVRVKDQHADIVGRTLFMK 1361

Query: 332  EPKPIEG--PKQSI 367
            EPK  +G  P+Q I
Sbjct: 1362 EPKVAKGEPPQQPI 1375


>AL024484-8|CAA19673.1|  301|Drosophila melanogaster
           EG:96G10.6,FBgn0003374;Sgs4 protein.
          Length = 301

 Score = 29.1 bits (62), Expect = 9.0
 Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
 Frame = +2

Query: 149 ILVVVCPNSSMYLIMSGSN*PSLKGDPRPRVFLKFNVNKMP-VLQRIKKPTTRKGKK 316
           +L   CP+S      S    P  K DP+P+   K      P V    KK TT+K +K
Sbjct: 237 LLTPKCPDSKPKSQASCKPSPKCKSDPKPKAASKATSKPKPKVCDSGKKNTTKKPRK 293


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,950,646
Number of Sequences: 53049
Number of extensions: 743937
Number of successful extensions: 1751
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1749
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4546383066
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)