Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_J10
         (986 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            26   1.5  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           25   4.6  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 26.2 bits (55), Expect = 1.5
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = +2

Query: 455 PLXXPPPPPXGG 490
           PL  PPPPP GG
Sbjct: 527 PLGPPPPPPPGG 538



 Score = 23.8 bits (49), Expect = 8.1
 Identities = 12/36 (33%), Positives = 12/36 (33%)
 Frame = +3

Query: 768 GGXXPPPXXXXXPGXPXXXXPXXXPPPXNFSRRSTF 875
           GG   PP      G      P   PPP N  R   F
Sbjct: 525 GGPLGPPPPPPPGGAVLNIPPQFLPPPLNLLRAPFF 560


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 24.6 bits (51), Expect = 4.6
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +2

Query: 530  KXPXPXGXGGGGG 568
            K P P G GGGGG
Sbjct: 1414 KPPGPEGVGGGGG 1426


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.316    0.141    0.446 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 396,422
Number of Sequences: 2352
Number of extensions: 5257
Number of successful extensions: 13
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 108119037
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)