Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_J10
(986 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 35 0.10
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 35 0.10
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 35 0.10
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 34 0.14
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 31 1.7
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 31 1.7
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 2.2
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 2.2
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 30 2.9
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 30 2.9
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 2.9
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 2.9
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 2.9
Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 28 8.9
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 28 8.9
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 28 8.9
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 34.7 bits (76), Expect = 0.10
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +1
Query: 721 PPPPXXXKKTPPXXXGGGAPPPPXXXXXRGXRXXXXPXXP 840
PPPP K +PP G PPPP R P P
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPP 276
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +1
Query: 721 PPPPXXXKKTPPXXXGGGAPPPP 789
PPPP +PP GG+PPPP
Sbjct: 272 PPPPPTG--SPPPPPAGGSPPPP 292
Score = 29.9 bits (64), Expect = 2.9
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 721 PPPPXXXKKTPPXXXGGGAPPPP 789
PPPP PP G PPPP
Sbjct: 280 PPPPPAGGSPPPPRAGSPPPPPP 302
Score = 29.1 bits (62), Expect = 5.1
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +1
Query: 721 PPPPXXXKKTPPXXXGGGAPPPPXXXXXRGXRXXXXPXXPLP 846
PPPP PP G PPPP R P P P
Sbjct: 264 PPPPRTGSPPPPPT--GSPPPPPAGGSPPPPRAGSPPPPPPP 303
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 34.7 bits (76), Expect = 0.10
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +1
Query: 721 PPPPXXXKKTPPXXXGGGAPPPPXXXXXRGXRXXXXPXXP 840
PPPP K +PP G PPPP R P P
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPP 297
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +1
Query: 721 PPPPXXXKKTPPXXXGGGAPPPP 789
PPPP +PP GG+PPPP
Sbjct: 293 PPPPPTG--SPPPPPAGGSPPPP 313
Score = 29.9 bits (64), Expect = 2.9
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 721 PPPPXXXKKTPPXXXGGGAPPPP 789
PPPP PP G PPPP
Sbjct: 301 PPPPPAGGSPPPPRAGSPPPPPP 323
Score = 29.1 bits (62), Expect = 5.1
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +1
Query: 721 PPPPXXXKKTPPXXXGGGAPPPPXXXXXRGXRXXXXPXXPLP 846
PPPP PP G PPPP R P P P
Sbjct: 285 PPPPRTGSPPPPPT--GSPPPPPAGGSPPPPRAGSPPPPPPP 324
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 34.7 bits (76), Expect = 0.10
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +1
Query: 721 PPPPXXXKKTPPXXXGGGAPPPPXXXXXRGXRXXXXPXXP 840
PPPP K +PP G PPPP R P P
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPP 282
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +1
Query: 721 PPPPXXXKKTPPXXXGGGAPPPP 789
PPPP +PP GG+PPPP
Sbjct: 278 PPPPPTG--SPPPPPAGGSPPPP 298
Score = 29.9 bits (64), Expect = 2.9
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 721 PPPPXXXKKTPPXXXGGGAPPPP 789
PPPP PP G PPPP
Sbjct: 286 PPPPPAGGSPPPPRAGSPPPPPP 308
Score = 29.1 bits (62), Expect = 5.1
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +1
Query: 721 PPPPXXXKKTPPXXXGGGAPPPPXXXXXRGXRXXXXPXXPLP 846
PPPP PP G PPPP R P P P
Sbjct: 270 PPPPRTGSPPPPPT--GSPPPPPAGGSPPPPRAGSPPPPPPP 309
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 34.3 bits (75), Expect = 0.14
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +1
Query: 721 PPPPXXXKKTPPXXXGGGAPPPP 789
PPPP P GGGAPPPP
Sbjct: 34 PPPPPACAPPPAPACGGGAPPPP 56
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 30.7 bits (66), Expect = 1.7
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +1
Query: 721 PPPPXXXKKTPPXXXGGGAPPPP 789
PPPP PP GG PPPP
Sbjct: 772 PPPPPSAIPLPPRLQGGIPPPPP 794
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/24 (50%), Positives = 12/24 (50%), Gaps = 1/24 (4%)
Frame = +1
Query: 721 PPPPXXXKKTP-PXXXGGGAPPPP 789
PPPP P P GG PPPP
Sbjct: 770 PPPPPPPSAIPLPPRLQGGIPPPP 793
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 30.7 bits (66), Expect = 1.7
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +1
Query: 721 PPPPXXXKKTPPXXXGGGAPPPP 789
PPPP PP GG PPPP
Sbjct: 772 PPPPPSAIPLPPRLQGGIPPPPP 794
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/24 (50%), Positives = 12/24 (50%), Gaps = 1/24 (4%)
Frame = +1
Query: 721 PPPPXXXKKTP-PXXXGGGAPPPP 789
PPPP P P GG PPPP
Sbjct: 770 PPPPPPPSAIPLPPRLQGGIPPPP 793
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +1
Query: 721 PPPPXXXKKTPPXXXGGGAPPPPXXXXXRGXRXXXXPXXP 840
PPPP + PP G PPPP G P P
Sbjct: 317 PPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYP 356
Score = 29.9 bits (64), Expect = 2.9
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +1
Query: 721 PPPPXXXKKTPPXXXGGGAPPPPXXXXXRGXRXXXXPXXP 840
PPPP PP G PPPP G P P
Sbjct: 300 PPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPP 339
Score = 29.5 bits (63), Expect = 3.9
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = +1
Query: 721 PPPPXXXKKTPPXXXGGGAPPPPXXXXXRGXRXXXXPXXPLP 846
PP P + PP G PPPP R P P P
Sbjct: 278 PPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPP 319
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +1
Query: 721 PPPPXXXKKTPPXXXGGGAPPPP 789
PPPP +TP G PPPP
Sbjct: 298 PPPPPPPGRTPGPPGMPGMPPPP 320
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 721 PPPPXXXKKTPPXXXGGGAPPPP 789
PPPP PP G PPPP
Sbjct: 364 PPPPPSRPPAPPSGHGMIPPPPP 386
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +1
Query: 721 PPPPXXXKKTPPXXXGGGAPPPPXXXXXRGXRXXXXPXXP 840
PPPP + PP G PPPP G P P
Sbjct: 327 PPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYP 366
Score = 29.9 bits (64), Expect = 2.9
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +1
Query: 721 PPPPXXXKKTPPXXXGGGAPPPPXXXXXRGXRXXXXPXXP 840
PPPP PP G PPPP G P P
Sbjct: 310 PPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPP 349
Score = 29.5 bits (63), Expect = 3.9
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = +1
Query: 721 PPPPXXXKKTPPXXXGGGAPPPPXXXXXRGXRXXXXPXXPLP 846
PP P + PP G PPPP R P P P
Sbjct: 288 PPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPP 329
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +1
Query: 721 PPPPXXXKKTPPXXXGGGAPPPP 789
PPPP +TP G PPPP
Sbjct: 308 PPPPPPPGRTPGPPGMPGMPPPP 330
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 721 PPPPXXXKKTPPXXXGGGAPPPP 789
PPPP PP G PPPP
Sbjct: 374 PPPPPSRPPAPPSGHGMIPPPPP 396
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 29.9 bits (64), Expect = 2.9
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 594 PPXGGXXNXPPPPPXPXGXG 535
PP GG PPPPP P G
Sbjct: 45 PPCGGGYEAPPPPPPPSYAG 64
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +1
Query: 706 FFXXXPPPPXXXKKTPPXXXGGGAPPPP 789
F PPPP PP GAPPPP
Sbjct: 90 FAGGIPPPPPMMGGIPPPPPMFGAPPPP 117
Score = 29.1 bits (62), Expect = 5.1
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 709 FXXXPPPPXXXKKTPPXXXGGGAPPPP 789
F PP P PP GG PPPP
Sbjct: 73 FIPPPPGPGGIPPPPPMFAGGIPPPPP 99
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 724 PPPXXXKKTPPXXXGGGAPPPP 789
PPP PP GG PPPP
Sbjct: 66 PPPVPNGFIPPPPGPGGIPPPP 87
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 721 PPPPXXXKKTPPXXXGGGAPPPP 789
PPPP PP G PPPP
Sbjct: 96 PPPPMMGGIPPPPPMFGAPPPPP 118
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/38 (34%), Positives = 14/38 (36%)
Frame = +1
Query: 727 PPXXXKKTPPXXXGGGAPPPPXXXXXRGXRXXXXPXXP 840
PP PP GG PPPP G + P P
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 29.5 bits (63), Expect = 3.9
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -3
Query: 594 PPXGGXXNXPPPPPXP 547
PP GG PPPPP P
Sbjct: 775 PPPGGFKGGPPPPPPP 790
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 721 PPPPXXXKKTPPXXXGGGAPPPP 789
PPPP PP G PPPP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPP 748
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 721 PPPPXXXKKTPPXXXGGGAPPPP 789
PPPP PP G PPPP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPP 764
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/38 (34%), Positives = 14/38 (36%)
Frame = +1
Query: 727 PPXXXKKTPPXXXGGGAPPPPXXXXXRGXRXXXXPXXP 840
PP PP GG PPPP G + P P
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 29.5 bits (63), Expect = 3.9
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -3
Query: 594 PPXGGXXNXPPPPPXP 547
PP GG PPPPP P
Sbjct: 775 PPPGGFKGGPPPPPPP 790
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 721 PPPPXXXKKTPPXXXGGGAPPPP 789
PPPP PP G PPPP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPP 748
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 721 PPPPXXXKKTPPXXXGGGAPPPP 789
PPPP PP G PPPP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPP 764
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/38 (34%), Positives = 14/38 (36%)
Frame = +1
Query: 727 PPXXXKKTPPXXXGGGAPPPPXXXXXRGXRXXXXPXXP 840
PP PP GG PPPP G + P P
Sbjct: 335 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 372
Score = 29.5 bits (63), Expect = 3.9
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -3
Query: 594 PPXGGXXNXPPPPPXP 547
PP GG PPPPP P
Sbjct: 358 PPPGGFKGGPPPPPPP 373
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 721 PPPPXXXKKTPPXXXGGGAPPPP 789
PPPP PP G PPPP
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPP 331
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 721 PPPPXXXKKTPPXXXGGGAPPPP 789
PPPP PP G PPPP
Sbjct: 325 PPPPPPPGGLPPISGGPPPPPPP 347
>Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical
protein C36H8.1 protein.
Length = 418
Score = 29.5 bits (63), Expect = 3.9
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +1
Query: 721 PPPPXXXKKTPPXXXGGGAPPPP 789
PPPP + PP APPPP
Sbjct: 177 PPPPRPPPQEPPKPVEQAAPPPP 199
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +1
Query: 721 PPPPXXXKKTPPXXXGGGAPPPP 789
P PP + P G GAPPPP
Sbjct: 771 PAPPGGRQAPMPPRGGPGAPPPP 793
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +1
Query: 721 PPPPXXXKKTPPXXXGGGAPPPP 789
P PP + P G GAPPPP
Sbjct: 771 PAPPGGRQAPMPPRGGPGAPPPP 793
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +1
Query: 721 PPPPXXXKKTPPXXXGGGAPPPP 789
P PP + P G GAPPPP
Sbjct: 771 PAPPGGRQAPMPPRGGPGAPPPP 793
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +1
Query: 721 PPPPXXXKKTPPXXXGGGAPPPP 789
P PP + P G GAPPPP
Sbjct: 771 PAPPGGRQAPMPPRGGPGAPPPP 793
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.316 0.141 0.446
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,565,660
Number of Sequences: 27780
Number of extensions: 172151
Number of successful extensions: 1314
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 429
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1062
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2573710548
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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