Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_J05
         (977 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC016950-1|AAH16950.1|   75|Homo sapiens KLHL23 protein protein.       33   2.1  
AK128416-1|BAC87430.1|  303|Homo sapiens protein ( Homo sapiens ...    32   3.7  
AK124805-1|BAC85954.1|  189|Homo sapiens protein ( Homo sapiens ...    31   4.8  

>BC016950-1|AAH16950.1|   75|Homo sapiens KLHL23 protein protein.
          Length = 75

 Score = 32.7 bits (71), Expect = 2.1
 Identities = 17/56 (30%), Positives = 25/56 (44%)
 Frame = -3

Query: 444 YKLMYVYIYNLFTITKYTCLIIYNYPIIFLVMSNFYCHAVSLICIMILKCYYIKLY 277
           Y  +YV+I     I  Y  + +Y Y  ++  M    C  +  IC+ I  C YI  Y
Sbjct: 6   YTHIYVFICMRSYIRAYVYIYVYTYVCMYTYMCIHTCVCIH-ICVYIYMCVYIYTY 60


>AK128416-1|BAC87430.1|  303|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46559 fis, clone THYMU3040126. ).
          Length = 303

 Score = 31.9 bits (69), Expect = 3.7
 Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = -3

Query: 444 YKLMYVYIYNLFTITKYTCLIIYNYPIIFL-VMSNFYCHAVSLICIMILKCYYI 286
           Y  M VY++    I  YT   IY Y  +++ + S+ Y H    +C+ I  C ++
Sbjct: 4   YMCMCVYVHIYTCIYVYTHTYIYTYTCMYVCIYSHTYIHTHVYVCVHIHICIHM 57



 Score = 30.7 bits (66), Expect = 8.5
 Identities = 14/51 (27%), Positives = 24/51 (47%)
 Frame = -3

Query: 429 VYIYNLFTITKYTCLIIYNYPIIFLVMSNFYCHAVSLICIMILKCYYIKLY 277
           +Y+Y    I  YTC+ +  Y   ++    + C  +  ICI +  C Y  +Y
Sbjct: 17  IYVYTHTYIYTYTCMYVCIYSHTYIHTHVYVCVHIH-ICIHMYMCVYTHIY 66


>AK124805-1|BAC85954.1|  189|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42815 fis, clone BRCAN2014143. ).
          Length = 189

 Score = 31.5 bits (68), Expect = 4.8
 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
 Frame = -3

Query: 444 YKLMYVYIYNLFTITKYTCLIIYNYPIIFLVMSNFYCHAVSLICIMILKCY-YIKLYHV 271
           Y  +Y YI     I  Y C+ ++ YP I   +    C  V +   M ++ Y +I   HV
Sbjct: 26  YLHVYTYICMYIHIYPYLCMYVHIYPYICTCIYTHICMRVHVYAYMYVRTYIHIMCMHV 84


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,970,398
Number of Sequences: 237096
Number of extensions: 986569
Number of successful extensions: 1200
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1195
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 13047299170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)