Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_J05
         (977 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL035436-1|CAB36503.1|  975|Drosophila melanogaster EG:163A10.1 ...    29   7.4  
AJ289882-1|CAB96574.2|  959|Drosophila melanogaster dumbfounded ...    29   7.4  
AF196553-1|AAF86308.1|  959|Drosophila melanogaster KIRRE protein.     29   7.4  
AE014298-492|AAN09598.1|  956|Drosophila melanogaster CG3653-PB,...    29   7.4  
AE014298-491|AAF45847.2|  956|Drosophila melanogaster CG3653-PA,...    29   7.4  

>AL035436-1|CAB36503.1|  975|Drosophila melanogaster EG:163A10.1
           protein.
          Length = 975

 Score = 29.5 bits (63), Expect = 7.4
 Identities = 10/28 (35%), Positives = 19/28 (67%)
 Frame = -3

Query: 375 NYPIIFLVMSNFYCHAVSLICIMILKCY 292
           N P++ +VM + +C A+ L+ +MI+  Y
Sbjct: 574 NIPVLLVVMGSMFCVAIILMIVMIIIVY 601


>AJ289882-1|CAB96574.2|  959|Drosophila melanogaster dumbfounded
           protein.
          Length = 959

 Score = 29.5 bits (63), Expect = 7.4
 Identities = 10/28 (35%), Positives = 19/28 (67%)
 Frame = -3

Query: 375 NYPIIFLVMSNFYCHAVSLICIMILKCY 292
           N P++ +VM + +C A+ L+ +MI+  Y
Sbjct: 570 NIPVLLVVMGSMFCVAIILMIVMIIIVY 597


>AF196553-1|AAF86308.1|  959|Drosophila melanogaster KIRRE protein.
          Length = 959

 Score = 29.5 bits (63), Expect = 7.4
 Identities = 10/28 (35%), Positives = 19/28 (67%)
 Frame = -3

Query: 375 NYPIIFLVMSNFYCHAVSLICIMILKCY 292
           N P++ +VM + +C A+ L+ +MI+  Y
Sbjct: 570 NIPVLLVVMGSMFCVAIILMIVMIIIVY 597


>AE014298-492|AAN09598.1|  956|Drosophila melanogaster CG3653-PB,
           isoform B protein.
          Length = 956

 Score = 29.5 bits (63), Expect = 7.4
 Identities = 10/28 (35%), Positives = 19/28 (67%)
 Frame = -3

Query: 375 NYPIIFLVMSNFYCHAVSLICIMILKCY 292
           N P++ +VM + +C A+ L+ +MI+  Y
Sbjct: 567 NIPVLLVVMGSMFCVAIILMIVMIIIVY 594


>AE014298-491|AAF45847.2|  956|Drosophila melanogaster CG3653-PA,
           isoform A protein.
          Length = 956

 Score = 29.5 bits (63), Expect = 7.4
 Identities = 10/28 (35%), Positives = 19/28 (67%)
 Frame = -3

Query: 375 NYPIIFLVMSNFYCHAVSLICIMILKCY 292
           N P++ +VM + +C A+ L+ +MI+  Y
Sbjct: 567 NIPVLLVVMGSMFCVAIILMIVMIIIVY 594


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,479,207
Number of Sequences: 53049
Number of extensions: 289198
Number of successful extensions: 363
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 363
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4915008720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)