Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_J05
(977 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 25 1.4
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 22 7.3
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 22 7.3
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 22 7.3
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 22 7.3
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 22 7.3
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 22 7.3
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 22 7.3
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 22 9.7
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 22 9.7
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 22 9.7
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 24.6 bits (51), Expect = 1.4
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -2
Query: 412 IYNNKIYMFNYLQLSYNISSY 350
I+NN Y +NY +YN ++Y
Sbjct: 323 IHNNNNYKYNYNNNNYNNNNY 343
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 22.2 bits (45), Expect = 7.3
Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Frame = -3
Query: 393 TCLIIYNY--PIIFLVMSNFYCHAVSLI 316
TC+ I+ Y P+IF+++ FY +S I
Sbjct: 222 TCIFIWAYVIPLIFIIL--FYSRLLSSI 247
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 22.2 bits (45), Expect = 7.3
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 412 IYNNKIYMFNYLQLSYN 362
I+NN Y +NY +YN
Sbjct: 90 IHNNNNYKYNYNNNNYN 106
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.2 bits (45), Expect = 7.3
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 412 IYNNKIYMFNYLQLSYN 362
I+NN Y +NY +YN
Sbjct: 90 IHNNNNYKYNYNNNNYN 106
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.2 bits (45), Expect = 7.3
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 412 IYNNKIYMFNYLQLSYN 362
I+NN Y +NY +YN
Sbjct: 90 IHNNNNYKYNYNNNNYN 106
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.2 bits (45), Expect = 7.3
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 412 IYNNKIYMFNYLQLSYN 362
I+NN Y +NY +YN
Sbjct: 90 IHNNNNYKYNYNNNNYN 106
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 22.2 bits (45), Expect = 7.3
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = -3
Query: 363 IFLVMSNFYCHAVSLICIMIL 301
+FL M++ + +LIC+M+L
Sbjct: 268 LFLNMASVFMRIFNLICMMLL 288
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 22.2 bits (45), Expect = 7.3
Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Frame = -3
Query: 393 TCLIIYNY--PIIFLVMSNFYCHAVSLI 316
TC+ I+ Y P+IF+++ FY +S I
Sbjct: 222 TCIFIWAYVIPLIFIIL--FYSRLLSSI 247
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 9.7
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 4/22 (18%)
Frame = -2
Query: 409 YNN----KIYMFNYLQLSYNIS 356
YNN K+Y NY +L YNI+
Sbjct: 91 YNNNNYKKLYCNNYKKLYYNIN 112
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 9.7
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 4/22 (18%)
Frame = -2
Query: 409 YNN----KIYMFNYLQLSYNIS 356
YNN K+Y NY +L YNI+
Sbjct: 91 YNNNNYKKLYCNNYKKLYYNIN 112
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 9.7
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 4/22 (18%)
Frame = -2
Query: 409 YNN----KIYMFNYLQLSYNIS 356
YNN K+Y NY +L YNI+
Sbjct: 91 YNNNNYKKLYCNNYRKLYYNIN 112
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,336
Number of Sequences: 438
Number of extensions: 2388
Number of successful extensions: 24
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 32290713
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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