Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_J02
         (1143 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0892 + 7037384-7037795,7038447-7038962,7039507-7039593,703...    25   2.7  
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076           26   7.4  
11_06_0561 - 24984960-24985205,24985283-24985354,24985906-249859...    29   9.1  
02_02_0240 + 8196140-8198248,8198381-8198650                           29   9.1  

>01_01_0892 +
           7037384-7037795,7038447-7038962,7039507-7039593,
           7039698-7039768,7040148-7040224,7040380-7040527,
           7040973-7041134,7041374-7041694
          Length = 597

 Score = 25.4 bits (53), Expect(2) = 2.7
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = +1

Query: 556 PPPXXXXXXXXXXPPPPPP 612
           PPP          PPPPPP
Sbjct: 113 PPPPPHLLHYYGHPPPPPP 131



 Score = 23.4 bits (48), Expect(2) = 2.7
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +1

Query: 595 PPPPPPXXXXXXGG 636
           PPPPPP      GG
Sbjct: 130 PPPPPPFKGDHYGG 143


>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
          Length = 906

 Score = 25.8 bits (54), Expect(2) = 7.4
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +3

Query: 588 GXXPPPPPXXXXKXGGG 638
           G  PPPPP    + GGG
Sbjct: 367 GPGPPPPPGAAGRGGGG 383



 Score = 21.4 bits (43), Expect(2) = 7.4
 Identities = 8/19 (42%), Positives = 8/19 (42%)
 Frame = +3

Query: 555 PPPRXXXXXXXGXXPPPPP 611
           PP         G  PPPPP
Sbjct: 335 PPAPSPSAAGAGSGPPPPP 353


>11_06_0561 -
           24984960-24985205,24985283-24985354,24985906-24985977,
           24986612-24986782,24987464-24987653,24987733-24987976,
           24988162-24988474,24988687-24989517,24989628-24989672,
           24989677-24989790,24989877-24990371,24990627-24990824,
           24990902-24991357
          Length = 1148

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 13/38 (34%), Positives = 14/38 (36%)
 Frame = -2

Query: 638 PPPXFXXXXGGGGGGXXXXXXXXXXGGGXKKKKXXXPP 525
           PPP      GGGGGG          GG     +   PP
Sbjct: 63  PPPTAAGGQGGGGGGPVSGGGGSAPGGAATAPRQGAPP 100


>02_02_0240 + 8196140-8198248,8198381-8198650
          Length = 792

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = -2

Query: 728 PPPPPPGGGXXXXXXP 681
           PPPPPPGGG      P
Sbjct: 22  PPPPPPGGGAKPEPPP 37


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,487,968
Number of Sequences: 37544
Number of extensions: 543419
Number of successful extensions: 9613
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5809
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3468127212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)