Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_J01
         (907 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02588-1|AAA18901.1|  110|Anopheles gambiae translation initiati...   224   3e-60
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    24   7.3  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    24   7.3  
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    23   9.6  

>U02588-1|AAA18901.1|  110|Anopheles gambiae translation initiation
           factor protein.
          Length = 110

 Score =  224 bits (548), Expect = 3e-60
 Identities = 102/110 (92%), Positives = 107/110 (97%)
 Frame = +3

Query: 183 MSIQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRAC 362
           MSIQNLNTFDPFADAIK ++ DVQDGLVH+RIQQRNGRKTLTTVQGLS+EYDLKKIVRAC
Sbjct: 1   MSIQNLNTFDPFADAIKGADYDVQDGLVHIRIQQRNGRKTLTTVQGLSAEYDLKKIVRAC 60

Query: 363 KKEFACNGTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 512
           KKEFACNGTV+EHPEYGEVLQLQGDQRENICQWLTKSGL KPEQLKVHGF
Sbjct: 61  KKEFACNGTVIEHPEYGEVLQLQGDQRENICQWLTKSGLAKPEQLKVHGF 110


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 23.8 bits (49), Expect = 7.3
 Identities = 19/43 (44%), Positives = 21/43 (48%), Gaps = 10/43 (23%)
 Frame = -2

Query: 369 PSCMPAR--SSSGHI------PRKGLA--P*SASYARFVAGYG 271
           PS  P    SSSG        P  G A  P +ASY RF+AG G
Sbjct: 228 PSIFPTEVGSSSGRFRPILWTPENGYAEEPSNASYPRFIAGPG 270


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 23.8 bits (49), Expect = 7.3
 Identities = 19/43 (44%), Positives = 21/43 (48%), Gaps = 10/43 (23%)
 Frame = -2

Query: 369 PSCMPAR--SSSGHI------PRKGLA--P*SASYARFVAGYG 271
           PS  P    SSSG        P  G A  P +ASY RF+AG G
Sbjct: 228 PSIFPTEVGSSSGRFRPILWTPENGYAEEPSNASYPRFIAGPG 270


>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 23.4 bits (48), Expect = 9.6
 Identities = 17/54 (31%), Positives = 28/54 (51%)
 Frame = +3

Query: 336 DLKKIVRACKKEFACNGTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQL 497
           DL ++V +  ++F C   V+  PE  E+L LQ  +   I  WLT+    +  Q+
Sbjct: 532 DLMQMVSSQMQQFLCLQNVLLEPETDELL-LQFYEASAI--WLTQLSAREASQI 582


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 634,850
Number of Sequences: 2352
Number of extensions: 12720
Number of successful extensions: 21
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97987887
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)