Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_I24
         (895 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF289023-1|AAG01854.1|  495|Homo sapiens formiminotransferase cy...    30   9.9  
AB058686-1|BAB47412.1| 1560|Homo sapiens KIAA1783 protein protein.     30   9.9  

>AF289023-1|AAG01854.1|  495|Homo sapiens formiminotransferase
           cyclodeaminase form D protein.
          Length = 495

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +2

Query: 485 PAKGQEP*KGRVAGVFHRLRPPDEHHK 565
           P  GQ P  GRV  +F R   P+ HH+
Sbjct: 466 PGGGQSPGDGRVWRIFQRAHQPEGHHR 492


>AB058686-1|BAB47412.1| 1560|Homo sapiens KIAA1783 protein protein.
          Length = 1560

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 2/74 (2%)
 Frame = -3

Query: 704  PEGRKADRYPVSXRVGTGERTRSFQGETPGIF--IVLSGFATSDLSVDFCDARQGGGAYG 531
            P    A   P     G  +R+ S  G    IF  ++ SG +  + S       +GGGA G
Sbjct: 784  PPPGPAPTLPSRDHTGEVQRSGSLDGFLDQIFQPVISSGLSDLEQSWALSSRMKGGGAIG 843

Query: 530  KRQQRGLFTVPGLL 489
              QQ      PG++
Sbjct: 844  PTQQGYPMVYPGMI 857


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,545,435
Number of Sequences: 237096
Number of extensions: 1909624
Number of successful extensions: 5685
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5685
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)