Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_I23
         (933 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z37983-1|CAA86061.1|  276|Caenorhabditis elegans Hypothetical pr...    71   1e-12
U58760-7|AAK31463.1|  188|Caenorhabditis elegans Hypothetical pr...    31   0.89 
Z81579-4|CAE17915.1|  212|Caenorhabditis elegans Hypothetical pr...    31   1.2  
Z66499-4|CAA91301.1|  164|Caenorhabditis elegans Hypothetical pr...    31   1.2  
U55854-7|AAK68158.1|  166|Caenorhabditis elegans Hypothetical pr...    31   1.2  
U55854-6|AAK68161.1|  197|Caenorhabditis elegans Hypothetical pr...    31   1.2  
Z69792-3|CAA93666.1|  284|Caenorhabditis elegans Hypothetical pr...    30   2.1  
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr...    28   8.3  

>Z37983-1|CAA86061.1|  276|Caenorhabditis elegans Hypothetical
           protein B0393.1 protein.
          Length = 276

 Score = 70.9 bits (166), Expect = 1e-12
 Identities = 35/66 (53%), Positives = 43/66 (65%)
 Frame = +3

Query: 282 KKLVLAARAVVTIEKPADVFVISSRAFGQRAVLXFAGPTGATPIXGRFKPXGFNNXIQLX 461
           +KL+LAARA+  +E PADV V+S+R + QRA+L FA  TGAT I GRF P    N IQ  
Sbjct: 56  EKLLLAARAIAAVENPADVVVVSARPYAQRALLKFAAHTGATAIFGRFSPGCLTNQIQKT 115

Query: 462 SXNPFL 479
              P L
Sbjct: 116 FKEPRL 121



 Score = 68.5 bits (160), Expect = 6e-12
 Identities = 28/50 (56%), Positives = 39/50 (78%)
 Frame = +2

Query: 137 SPSTRKNVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEK 286
           S  T ++V K+LA   HLG+ N+NFQM+ YVYKRR DG ++IN+++TWEK
Sbjct: 8   SALTEEDVMKLLATQAHLGSTNLNFQMQQYVYKRRFDGPNIINVKKTWEK 57


>U58760-7|AAK31463.1|  188|Caenorhabditis elegans Hypothetical
           protein C27A2.5 protein.
          Length = 188

 Score = 31.5 bits (68), Expect = 0.89
 Identities = 13/35 (37%), Positives = 15/35 (42%)
 Frame = +2

Query: 296 GCSCCRNHRETR*CVRHLITGLRSACCTEXCRAHR 400
           GC CC    +   C R   T  R+ CCT  C   R
Sbjct: 82  GCGCCCCRPKCCCCCRRCCTCCRTCCCTRCCTCCR 116


>Z81579-4|CAE17915.1|  212|Caenorhabditis elegans Hypothetical
           protein R13H4.8 protein.
          Length = 212

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 13/35 (37%), Positives = 14/35 (40%)
 Frame = +2

Query: 296 GCSCCRNHRETR*CVRHLITGLRSACCTEXCRAHR 400
           GC CC        C R   T  R+ CCT  C   R
Sbjct: 83  GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCR 117


>Z66499-4|CAA91301.1|  164|Caenorhabditis elegans Hypothetical
           protein T01B7.8 protein.
          Length = 164

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 13/35 (37%), Positives = 14/35 (40%)
 Frame = +2

Query: 296 GCSCCRNHRETR*CVRHLITGLRSACCTEXCRAHR 400
           GC CC        C R   T  R+ CCT  C   R
Sbjct: 81  GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCR 115


>U55854-7|AAK68158.1|  166|Caenorhabditis elegans Hypothetical
           protein C04G6.10 protein.
          Length = 166

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 13/35 (37%), Positives = 14/35 (40%)
 Frame = +2

Query: 296 GCSCCRNHRETR*CVRHLITGLRSACCTEXCRAHR 400
           GC CC        C R   T  R+ CCT  C   R
Sbjct: 82  GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCR 116


>U55854-6|AAK68161.1|  197|Caenorhabditis elegans Hypothetical
           protein C04G6.7 protein.
          Length = 197

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 13/35 (37%), Positives = 14/35 (40%)
 Frame = +2

Query: 296 GCSCCRNHRETR*CVRHLITGLRSACCTEXCRAHR 400
           GC CC        C R   T  R+ CCT  C   R
Sbjct: 83  GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCR 117


>Z69792-3|CAA93666.1|  284|Caenorhabditis elegans Hypothetical
           protein F40E10.5 protein.
          Length = 284

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = +2

Query: 266 LRRTWEKTCSGCSCCRNHRETR*CVRHLITGLRSACCTEXC 388
           + + WEK   G +C + H ETR  +R L T  R       C
Sbjct: 55  ITKIWEKYVEGNTCEKEHEETRNIIRGLTTEERDKVFAGRC 95


>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical
           protein H02I12.1 protein.
          Length = 1319

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = -3

Query: 352 DEMTNTSAGFSMVTTARAARTSFFPGTTQVDHMGTISTSF 233
           D +  T+ GF  VTT    +T F     QV+  G  S+ F
Sbjct: 283 DAIETTTTGFDAVTTTTTTQTPFVCQEGQVNSFGMCSSRF 322


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,997,310
Number of Sequences: 27780
Number of extensions: 327988
Number of successful extensions: 576
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 535
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 575
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2402214122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)