Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_I23
(933 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 23 4.0
EF032397-1|ABM97933.1| 200|Apis mellifera arginine kinase protein. 22 6.9
AF023619-1|AAC39040.1| 355|Apis mellifera arginine kinase protein. 22 6.9
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 22 9.2
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 22 9.2
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 22 9.2
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 22 9.2
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 22 9.2
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 22 9.2
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 22 9.2
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 22 9.2
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 23.0 bits (47), Expect = 4.0
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +3
Query: 72 GIXRGLVVTQXSATMSGGLERARPQRGRMSPKCLLQPPILGQKM 203
G+ G+++ + G L A QRG + CLL I K+
Sbjct: 318 GLVEGVIIDCSNHIGRGKLVTALIQRGTLKKGCLLVSGIASAKV 361
>EF032397-1|ABM97933.1| 200|Apis mellifera arginine kinase protein.
Length = 200
Score = 22.2 bits (45), Expect = 6.9
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +2
Query: 563 KXPPKNFGNLXSL 601
K PPK+FG++ SL
Sbjct: 81 KHPPKDFGDVDSL 93
>AF023619-1|AAC39040.1| 355|Apis mellifera arginine kinase protein.
Length = 355
Score = 22.2 bits (45), Expect = 6.9
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +2
Query: 563 KXPPKNFGNLXSL 601
K PPK+FG++ SL
Sbjct: 97 KHPPKDFGDVDSL 109
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.8 bits (44), Expect = 9.2
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 130 NVLALNEEECHQNACCNHPS 189
NVL ++++ H+N+ N PS
Sbjct: 344 NVLDIDDDIRHKNSAANPPS 363
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.8 bits (44), Expect = 9.2
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 130 NVLALNEEECHQNACCNHPS 189
NVL ++++ H+N+ N PS
Sbjct: 344 NVLDIDDDIRHKNSAANPPS 363
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.8 bits (44), Expect = 9.2
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 130 NVLALNEEECHQNACCNHPS 189
NVL ++++ H+N+ N PS
Sbjct: 344 NVLDIDDDIRHKNSAANPPS 363
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.8 bits (44), Expect = 9.2
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 130 NVLALNEEECHQNACCNHPS 189
NVL ++++ H+N+ N PS
Sbjct: 344 NVLDIDDDIRHKNSAANPPS 363
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.8 bits (44), Expect = 9.2
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 130 NVLALNEEECHQNACCNHPS 189
NVL ++++ H+N+ N PS
Sbjct: 344 NVLDIDDDIRHKNSAANPPS 363
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.8 bits (44), Expect = 9.2
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 130 NVLALNEEECHQNACCNHPS 189
NVL ++++ H+N+ N PS
Sbjct: 344 NVLDIDDDIRHKNSAANPPS 363
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 9.2
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 130 NVLALNEEECHQNACCNHPS 189
NVL ++++ H+N+ N PS
Sbjct: 412 NVLDIDDDIRHKNSAANPPS 431
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 9.2
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 130 NVLALNEEECHQNACCNHPS 189
NVL ++++ H+N+ N PS
Sbjct: 412 NVLDIDDDIRHKNSAANPPS 431
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,722
Number of Sequences: 438
Number of extensions: 4165
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30476628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -