Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_I21
(910 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 90 2e-18
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 79 4e-15
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 77 2e-14
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 76 3e-14
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 76 4e-14
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 75 7e-14
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 75 7e-14
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 75 7e-14
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 73 2e-13
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 73 2e-13
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 73 2e-13
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 73 3e-13
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 72 7e-13
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 71 9e-13
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 71 9e-13
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 70 3e-12
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 69 5e-12
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 67 1e-11
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 67 1e-11
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 67 1e-11
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 67 2e-11
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 67 2e-11
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 66 4e-11
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 65 6e-11
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 65 6e-11
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 65 6e-11
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 64 1e-10
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 64 2e-10
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 63 2e-10
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 62 7e-10
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 61 1e-09
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 61 1e-09
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 61 1e-09
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 60 2e-09
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 60 3e-09
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 60 3e-09
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 59 5e-09
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 58 7e-09
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 56 3e-08
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 56 3e-08
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 55 8e-08
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 55 8e-08
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 54 1e-07
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 54 1e-07
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 54 1e-07
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 50 2e-06
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 39 0.004
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 39 0.006
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related... 31 0.86
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related... 31 0.86
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical p... 31 1.5
Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical pr... 31 1.5
AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase... 31 1.5
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 29 3.5
U80027-18|AAC48115.1| 198|Caenorhabditis elegans Hypothetical p... 28 8.0
AF067949-10|AAC19239.4| 304|Caenorhabditis elegans Seven tm rec... 28 8.0
AF067949-9|AAX22283.1| 323|Caenorhabditis elegans Seven tm rece... 28 8.0
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 90.2 bits (214), Expect = 2e-18
Identities = 43/113 (38%), Positives = 74/113 (65%)
Frame = +2
Query: 404 KTFEDIGLKDNLVKVVKDLGFTLPTAIQTKAVPAILNGHNTVITAETGCGKTLAYLXPII 583
KT+ G+ ++ V+K ++ PT+IQ +A+P+I++G + + A+TG GKTLA+L P+
Sbjct: 304 KTWAQCGVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMF 363
Query: 584 QHILEWKPTIQEEFNSPLAVVITPNRELALQIGEVAQTIAQSININVTTLIGG 742
+HIL+ +P + EE + P+AV++ P RELA+Q + A A+ + + V GG
Sbjct: 364 RHILD-QPEL-EEGDGPIAVILAPTRELAMQTYKEANKFAKPLGLKVACTYGG 414
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 79.0 bits (186), Expect = 4e-15
Identities = 39/120 (32%), Positives = 66/120 (55%), Gaps = 2/120 (1%)
Frame = +2
Query: 404 KTFEDIGLKDNLVKVVKDLGFTLPTAIQTKAVPAILNGHNTVITAETGCGKTLAYLXPII 583
+ +E+ G D + + VK++G+ PT IQ +A+P L + + AETG GKT A+L P++
Sbjct: 301 RNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVIGVAETGSGKTAAFLLPLL 360
Query: 584 QHILEWKPTIQEEFN--SPLAVVITPNRELALQIGEVAQTIAQSININVTTLIGGKRKKN 757
I ++E P A+++ P RELA QI E + + I ++IGG +++
Sbjct: 361 VWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFGKLLGIKTVSVIGGASRED 420
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 76.6 bits (180), Expect = 2e-14
Identities = 39/105 (37%), Positives = 63/105 (60%)
Frame = +2
Query: 437 LVKVVKDLGFTLPTAIQTKAVPAILNGHNTVITAETGCGKTLAYLXPIIQHILEWKPTIQ 616
L++ ++ + PT IQ A+P+ L+G + + A+TG GKT AYL P I HI++ +P ++
Sbjct: 276 LMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVHIMD-QPDLK 334
Query: 617 EEFNSPLAVVITPNRELALQIGEVAQTIAQSININVTTLIGGKRK 751
P+AV++ P RELA+Q+ + A+ + NIN GG K
Sbjct: 335 AG-EGPVAVIVVPTRELAIQVFQEAKKFCKVYNINPICAYGGGSK 378
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 76.2 bits (179), Expect = 3e-14
Identities = 39/108 (36%), Positives = 63/108 (58%), Gaps = 2/108 (1%)
Frame = +2
Query: 434 NLVKVVKDLGFTLPTAIQTKAVPAILNGHNTVITAETGCGKTLAYLXPIIQ--HILEWKP 607
NL+K V+ LGFT T IQ K++ +L G + + +A+TG GKTLA+L P I+ H L WK
Sbjct: 78 NLLKAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAIELLHKLNWK- 136
Query: 608 TIQEEFNSPLAVVITPNRELALQIGEVAQTIAQSININVTTLIGGKRK 751
+ N ++++P REL++Q V + + N+ ++GG +
Sbjct: 137 ----QHNGTGVIIVSPTRELSMQTYGVLSELLEGSNLTYGLVMGGSNR 180
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 75.8 bits (178), Expect = 4e-14
Identities = 40/129 (31%), Positives = 66/129 (51%)
Frame = +2
Query: 356 IIHGNANKKEETPVYRKTFEDIGLKDNLVKVVKDLGFTLPTAIQTKAVPAILNGHNTVIT 535
++ K +E V K+F ++G+ L + LG+ P+ IQ A+P L G + +
Sbjct: 28 VVTEEIEKDDEEDVKEKSFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGL 87
Query: 536 AETGCGKTLAYLXPIIQHILEWKPTIQEEFNSPLAVVITPNRELALQIGEVAQTIAQSIN 715
AETG GKT A+ P++Q +L+ +V+TP RELA QIG+ + + I
Sbjct: 88 AETGSGKTGAFAIPVLQSLLDHPQAF-------FCLVLTPTRELAFQIGQQFEALGSGIG 140
Query: 716 INVTTLIGG 742
+ ++GG
Sbjct: 141 LIAAVIVGG 149
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 74.9 bits (176), Expect = 7e-14
Identities = 43/129 (33%), Positives = 69/129 (53%), Gaps = 8/129 (6%)
Frame = +2
Query: 383 EETPVYRKTFEDIGLKDNLVKVVKDLGFTLPTAIQTKAVPAILNGHNTVITAETGCGKTL 562
+ P + F + G +++ V G++ PT +Q ++P +L + + A+TG GKT
Sbjct: 132 DSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTA 191
Query: 563 AYLXPIIQHILEWKPTIQE--EFNS------PLAVVITPNRELALQIGEVAQTIAQSINI 718
A+L PIIQHIL P + + F + P A+V++P RELA+QI + A + NI
Sbjct: 192 AFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNI 251
Query: 719 NVTTLIGGK 745
L GG+
Sbjct: 252 QTAILYGGR 260
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 74.9 bits (176), Expect = 7e-14
Identities = 43/129 (33%), Positives = 69/129 (53%), Gaps = 8/129 (6%)
Frame = +2
Query: 383 EETPVYRKTFEDIGLKDNLVKVVKDLGFTLPTAIQTKAVPAILNGHNTVITAETGCGKTL 562
+ P + F + G +++ V G++ PT +Q ++P +L + + A+TG GKT
Sbjct: 116 DSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTA 175
Query: 563 AYLXPIIQHILEWKPTIQE--EFNS------PLAVVITPNRELALQIGEVAQTIAQSINI 718
A+L PIIQHIL P + + F + P A+V++P RELA+QI + A + NI
Sbjct: 176 AFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNI 235
Query: 719 NVTTLIGGK 745
L GG+
Sbjct: 236 QTAILYGGR 244
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 74.9 bits (176), Expect = 7e-14
Identities = 43/129 (33%), Positives = 69/129 (53%), Gaps = 8/129 (6%)
Frame = +2
Query: 383 EETPVYRKTFEDIGLKDNLVKVVKDLGFTLPTAIQTKAVPAILNGHNTVITAETGCGKTL 562
+ P + F + G +++ V G++ PT +Q ++P +L + + A+TG GKT
Sbjct: 113 DSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTA 172
Query: 563 AYLXPIIQHILEWKPTIQE--EFNS------PLAVVITPNRELALQIGEVAQTIAQSINI 718
A+L PIIQHIL P + + F + P A+V++P RELA+QI + A + NI
Sbjct: 173 AFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNI 232
Query: 719 NVTTLIGGK 745
L GG+
Sbjct: 233 QTAILYGGR 241
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 73.3 bits (172), Expect = 2e-13
Identities = 38/113 (33%), Positives = 64/113 (56%)
Frame = +2
Query: 404 KTFEDIGLKDNLVKVVKDLGFTLPTAIQTKAVPAILNGHNTVITAETGCGKTLAYLXPII 583
++F+D+ LK+ L++ + GF P+AIQ +A+ G + + A++G GKT + I+
Sbjct: 29 ESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSIL 88
Query: 584 QHILEWKPTIQEEFNSPLAVVITPNRELALQIGEVAQTIAQSININVTTLIGG 742
Q I P +Q A+V+ P RELA QI +V + + +N+N+ IGG
Sbjct: 89 QRIDHEDPHVQ-------ALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGG 134
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 73.3 bits (172), Expect = 2e-13
Identities = 38/113 (33%), Positives = 64/113 (56%)
Frame = +2
Query: 404 KTFEDIGLKDNLVKVVKDLGFTLPTAIQTKAVPAILNGHNTVITAETGCGKTLAYLXPII 583
++F+D+ LK+ L++ + GF P+AIQ +A+ G + + A++G GKT + I+
Sbjct: 29 ESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSIL 88
Query: 584 QHILEWKPTIQEEFNSPLAVVITPNRELALQIGEVAQTIAQSININVTTLIGG 742
Q I P +Q A+V+ P RELA QI +V + + +N+N+ IGG
Sbjct: 89 QRIDHEDPHVQ-------ALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGG 134
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 73.3 bits (172), Expect = 2e-13
Identities = 36/112 (32%), Positives = 65/112 (58%)
Frame = +2
Query: 407 TFEDIGLKDNLVKVVKDLGFTLPTAIQTKAVPAILNGHNTVITAETGCGKTLAYLXPIIQ 586
TF+ +GL+++L++ + GF P+AIQ +AVPAIL + + A++G GKT + ++Q
Sbjct: 27 TFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSISVLQ 86
Query: 587 HILEWKPTIQEEFNSPLAVVITPNRELALQIGEVAQTIAQSININVTTLIGG 742
++ + A++++P RELA+QI +V + +N+ IGG
Sbjct: 87 -------SLDTQVRETQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGG 131
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 72.9 bits (171), Expect = 3e-13
Identities = 35/112 (31%), Positives = 65/112 (58%)
Frame = +2
Query: 407 TFEDIGLKDNLVKVVKDLGFTLPTAIQTKAVPAILNGHNTVITAETGCGKTLAYLXPIIQ 586
TF+ +GL+++L++ + GF P+AIQ +A+PAIL + + A++G GKT + ++Q
Sbjct: 27 TFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISVLQ 86
Query: 587 HILEWKPTIQEEFNSPLAVVITPNRELALQIGEVAQTIAQSININVTTLIGG 742
++ + A++++P RELA+QI +V + +N+ IGG
Sbjct: 87 -------SLDTQVRETQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGG 131
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 71.7 bits (168), Expect = 7e-13
Identities = 39/129 (30%), Positives = 72/129 (55%), Gaps = 5/129 (3%)
Frame = +2
Query: 371 ANKKEETPVYRKTFEDIGLKDNLVKVVKDLGFTLPTAIQTKAVPAILNGHNTVI-TAETG 547
A+KK + +++ + L + +++ ++ +GF+ PT IQ+ +PA + V+ AETG
Sbjct: 147 ASKKTDISAWKQFYF---LPNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETG 203
Query: 548 CGKTLAYLXPIIQHILEWKPTIQE----EFNSPLAVVITPNRELALQIGEVAQTIAQSIN 715
GKTLA+ P++ +LE QE E P A+++ P REL +QI + + +
Sbjct: 204 SGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMKHINALISTTQ 263
Query: 716 INVTTLIGG 742
+ T+++GG
Sbjct: 264 LIATSIVGG 272
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 71.3 bits (167), Expect = 9e-13
Identities = 35/111 (31%), Positives = 63/111 (56%)
Frame = +2
Query: 410 FEDIGLKDNLVKVVKDLGFTLPTAIQTKAVPAILNGHNTVITAETGCGKTLAYLXPIIQH 589
++ IGL ++ K ++ GF PT IQ K +P I++G + V + TG GKT A++ P++Q
Sbjct: 26 WQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQK 85
Query: 590 ILEWKPTIQEEFNSPLAVVITPNRELALQIGEVAQTIAQSININVTTLIGG 742
+ + + A++++P RELALQ +V + + + + L+GG
Sbjct: 86 LK------RRDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGG 130
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 71.3 bits (167), Expect = 9e-13
Identities = 35/111 (31%), Positives = 63/111 (56%)
Frame = +2
Query: 410 FEDIGLKDNLVKVVKDLGFTLPTAIQTKAVPAILNGHNTVITAETGCGKTLAYLXPIIQH 589
++ IGL ++ K ++ GF PT IQ K +P I++G + V + TG GKT A++ P++Q
Sbjct: 26 WQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQK 85
Query: 590 ILEWKPTIQEEFNSPLAVVITPNRELALQIGEVAQTIAQSININVTTLIGG 742
+ + + A++++P RELALQ +V + + + + L+GG
Sbjct: 86 LK------RRDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGG 130
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 69.7 bits (163), Expect = 3e-12
Identities = 46/152 (30%), Positives = 75/152 (49%), Gaps = 11/152 (7%)
Frame = +2
Query: 383 EETPVYRKTFEDIGLKDNLVKVVKDLGFTLPTAIQTKAVPAILNGHNTVITAETGCGKTL 562
++ P F D+ L + + + +K G+ PT +Q ++PA+ G + + A+TG GKT
Sbjct: 159 DDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTGSGKTA 218
Query: 563 AYLXPIIQHILEWKP-TIQEEFNS--------PLAVVITPNRELALQIGEVAQTIAQSIN 715
A+L P++ IL+ P + S P A+V++P REL+LQI ++ A
Sbjct: 219 AFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQIFNESRKFAYRTP 278
Query: 716 INVTTLIGGKR--KKNVXXLQLSP*XXITTLG 805
I L GG+ K + L+L I T G
Sbjct: 279 ITSALLYGGRENYKDQIHKLRLGCHILIATPG 310
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 68.9 bits (161), Expect = 5e-12
Identities = 35/96 (36%), Positives = 54/96 (56%)
Frame = +2
Query: 464 FTLPTAIQTKAVPAILNGHNTVITAETGCGKTLAYLXPIIQHILEWKPTIQEEFNSPLAV 643
F PT IQ+ + P ++G + + A+TG GKTLA++ P + HI K ++ P +
Sbjct: 149 FQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHIT--KQAHRQRGEGPAVL 206
Query: 644 VITPNRELALQIGEVAQTIAQSININVTTLIGGKRK 751
V+ P RELA Q+ EV+ S+ + +T L GG K
Sbjct: 207 VLLPTRELAQQVQEVSIDFCHSLGLKMTCLFGGASK 242
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 67.3 bits (157), Expect = 1e-11
Identities = 38/115 (33%), Positives = 58/115 (50%), Gaps = 2/115 (1%)
Frame = +2
Query: 404 KTFEDIGLKDNLVKVVKDLGFTLPTAIQTKAVPAILNGHNTVITAETGCGKTLAYLXPII 583
KTF + L + + K V G+T T IQ +P I GH+ + A+TG GKT A+L PI+
Sbjct: 552 KTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIM 611
Query: 584 QHILEWKP--TIQEEFNSPLAVVITPNRELALQIGEVAQTIAQSININVTTLIGG 742
+++ T E P +++TP REL QI + A + + + GG
Sbjct: 612 ARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGG 666
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 67.3 bits (157), Expect = 1e-11
Identities = 38/115 (33%), Positives = 58/115 (50%), Gaps = 2/115 (1%)
Frame = +2
Query: 404 KTFEDIGLKDNLVKVVKDLGFTLPTAIQTKAVPAILNGHNTVITAETGCGKTLAYLXPII 583
KTF + L + + K V G+T T IQ +P I GH+ + A+TG GKT A+L PI+
Sbjct: 552 KTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIM 611
Query: 584 QHILEWKP--TIQEEFNSPLAVVITPNRELALQIGEVAQTIAQSININVTTLIGG 742
+++ T E P +++TP REL QI + A + + + GG
Sbjct: 612 ARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGG 666
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 67.3 bits (157), Expect = 1e-11
Identities = 38/115 (33%), Positives = 58/115 (50%), Gaps = 2/115 (1%)
Frame = +2
Query: 404 KTFEDIGLKDNLVKVVKDLGFTLPTAIQTKAVPAILNGHNTVITAETGCGKTLAYLXPII 583
KTF + L + + K V G+T T IQ +P I GH+ + A+TG GKT A+L PI+
Sbjct: 552 KTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIM 611
Query: 584 QHILEWKP--TIQEEFNSPLAVVITPNRELALQIGEVAQTIAQSININVTTLIGG 742
+++ T E P +++TP REL QI + A + + + GG
Sbjct: 612 ARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGG 666
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 66.9 bits (156), Expect = 2e-11
Identities = 39/124 (31%), Positives = 64/124 (51%), Gaps = 3/124 (2%)
Frame = +2
Query: 377 KKEETPVYRKTFEDIGLKDNLVKVVKDLGFTLPTAIQTKAVPAILNGHNTVITAETGCGK 556
+ E V ++ + GL +++ +K + + IQ +P +L+GH+ + AET GK
Sbjct: 372 RNAEKDVRLTSWTNSGLHPTILETLKRIKYNNVRTIQGAMIPQVLDGHDVLGQAETSAGK 431
Query: 557 TLAYLXPIIQHILEWKPTIQ---EEFNSPLAVVITPNRELALQIGEVAQTIAQSININVT 727
T A+ PII IL + + + PLA+++ P RELA QI E +T Q+ +I V
Sbjct: 432 TAAFGLPIIDKILRMDEETRNKARQDDGPLALILAPTRELAAQIHEALRTYCQNTDIIVL 491
Query: 728 TLIG 739
G
Sbjct: 492 LSYG 495
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 66.9 bits (156), Expect = 2e-11
Identities = 32/74 (43%), Positives = 48/74 (64%)
Frame = +2
Query: 410 FEDIGLKDNLVKVVKDLGFTLPTAIQTKAVPAILNGHNTVITAETGCGKTLAYLXPIIQH 589
FE+ G+ L + L +TLPTA+Q++A+PAIL G + +I AETG GKT A+ PI Q
Sbjct: 4 FEEFGIIPELSDALSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLPIAQI 63
Query: 590 ILEWKPTIQEEFNS 631
+ E + + ++ NS
Sbjct: 64 VWERRKSAEKSQNS 77
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 65.7 bits (153), Expect = 4e-11
Identities = 39/134 (29%), Positives = 68/134 (50%), Gaps = 1/134 (0%)
Frame = +2
Query: 407 TFEDIGLKDNLVKVVKDLGFTLPTAIQTKAVPAILNGHNTVITAETGCGKTLAYLXPIIQ 586
+FE + L ++K G++ PT IQ +P L G + A TG GKT A++ PI++
Sbjct: 149 SFEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPILE 208
Query: 587 HILEWKPTIQEEFNSPLAVVITPNRELALQIGEVAQTIAQSININVTTLIGG-KRKKNVX 763
++ ++P + + +V+ P RELA+Q+ +V + ++ I + V GG K
Sbjct: 209 RMI-YRP---KGASCTRVLVLVPTRELAIQVFQVFRKLSTFIQLEVCLCAGGLDLKAQEA 264
Query: 764 XLQLSP*XXITTLG 805
L+ P + T G
Sbjct: 265 ALRSGPDVVVATPG 278
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 65.3 bits (152), Expect = 6e-11
Identities = 37/115 (32%), Positives = 60/115 (52%), Gaps = 2/115 (1%)
Frame = +2
Query: 404 KTFEDIGLKDNLVKVVKDLGFTLPTAIQTKAVPAILNGHNTVITAETGCGKTLAYLXPII 583
KTF + L + + K V G++ T IQ A+P + G++ + A+TG GKT A+L PI+
Sbjct: 341 KTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIM 400
Query: 584 QHILEWK--PTIQEEFNSPLAVVITPNRELALQIGEVAQTIAQSININVTTLIGG 742
+++ T E P +++TP RELA QI + A + + + GG
Sbjct: 401 TRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGG 455
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 65.3 bits (152), Expect = 6e-11
Identities = 37/115 (32%), Positives = 60/115 (52%), Gaps = 2/115 (1%)
Frame = +2
Query: 404 KTFEDIGLKDNLVKVVKDLGFTLPTAIQTKAVPAILNGHNTVITAETGCGKTLAYLXPII 583
KTF + L + + K V G++ T IQ A+P + G++ + A+TG GKT A+L PI+
Sbjct: 341 KTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIM 400
Query: 584 QHILEWK--PTIQEEFNSPLAVVITPNRELALQIGEVAQTIAQSININVTTLIGG 742
+++ T E P +++TP RELA QI + A + + + GG
Sbjct: 401 TRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGG 455
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 65.3 bits (152), Expect = 6e-11
Identities = 37/115 (32%), Positives = 60/115 (52%), Gaps = 2/115 (1%)
Frame = +2
Query: 404 KTFEDIGLKDNLVKVVKDLGFTLPTAIQTKAVPAILNGHNTVITAETGCGKTLAYLXPII 583
KTF + L + + K V G++ T IQ A+P + G++ + A+TG GKT A+L PI+
Sbjct: 341 KTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIM 400
Query: 584 QHILEWK--PTIQEEFNSPLAVVITPNRELALQIGEVAQTIAQSININVTTLIGG 742
+++ T E P +++TP RELA QI + A + + + GG
Sbjct: 401 TRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGG 455
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 64.1 bits (149), Expect = 1e-10
Identities = 41/124 (33%), Positives = 69/124 (55%), Gaps = 6/124 (4%)
Frame = +2
Query: 407 TFED-IGLKDNLVKVVKDLGFTLPTAIQTKAVPAILNGHNTVITAETGCGKTLAYLXPII 583
+FE G +++ ++ GF P+ IQ++ P +L+G + + ++TG GKTLA+L P +
Sbjct: 84 SFEQAFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPAL 143
Query: 584 QHI----LEWKPTIQEEFNSPLAVVITPNRELALQI-GEVAQTIAQSININVTTLIGGKR 748
HI +++ +E+ SP +V++P RELA QI GEV + +V GG R
Sbjct: 144 LHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIEGEVKKYSYNGYK-SVCLYGGGSR 202
Query: 749 KKNV 760
+ V
Sbjct: 203 PEQV 206
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 63.7 bits (148), Expect = 2e-10
Identities = 33/103 (32%), Positives = 56/103 (54%)
Frame = +2
Query: 404 KTFEDIGLKDNLVKVVKDLGFTLPTAIQTKAVPAILNGHNTVITAETGCGKTLAYLXPII 583
KTF D GL + ++K + +LG+ +Q + L N + A TG GKT A+L P++
Sbjct: 89 KTFADFGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIPLV 148
Query: 584 QHILEWKPTIQEEFNSPLAVVITPNRELALQIGEVAQTIAQSI 712
Q ++ T + P AV+I P +EL QI ++ ++Q++
Sbjct: 149 QKLIAESKT-NDGSVGPSAVIIAPTKELITQIYKLFVKLSQAL 190
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 63.3 bits (147), Expect = 2e-10
Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Frame = +2
Query: 464 FTLPTAIQTKAVPAILNGHNTVI-TAETGCGKTLAYLXPIIQHILEWKPTIQE----EFN 628
F+ PT IQ+ +PA + V+ AETG GKTLA+ P++ +LE QE E
Sbjct: 8 FSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVR 67
Query: 629 SPLAVVITPNRELALQIGEVAQTIAQSININVTTLIGG 742
P A+++ P REL +QI + + + + T+++GG
Sbjct: 68 GPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGG 105
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 61.7 bits (143), Expect = 7e-10
Identities = 36/111 (32%), Positives = 57/111 (51%)
Frame = +2
Query: 410 FEDIGLKDNLVKVVKDLGFTLPTAIQTKAVPAILNGHNTVITAETGCGKTLAYLXPIIQH 589
FED L ++ +KD +T PT IQ + L G + V A+TG GKTLA + P+++
Sbjct: 78 FEDFPLSWRTLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLEA 137
Query: 590 ILEWKPTIQEEFNSPLAVVITPNRELALQIGEVAQTIAQSININVTTLIGG 742
+ W+ ++ A++I+P RELALQ + + +IGG
Sbjct: 138 L--WRAKWSPDYGLG-ALIISPTRELALQTFSTINAVGAHHGFSCGLVIGG 185
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 60.9 bits (141), Expect = 1e-09
Identities = 33/114 (28%), Positives = 58/114 (50%)
Frame = +2
Query: 404 KTFEDIGLKDNLVKVVKDLGFTLPTAIQTKAVPAILNGHNTVITAETGCGKTLAYLXPII 583
K F +G+ + + ++ + T +Q +P IL G + + A TG GKTLA+ PI+
Sbjct: 89 KKFSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPIL 148
Query: 584 QHILEWKPTIQEEFNSPLAVVITPNRELALQIGEVAQTIAQSININVTTLIGGK 745
Q + + A+++TP RELA QI E + + I + + ++GG+
Sbjct: 149 Q-------KLSVDPYGIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGR 195
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 60.9 bits (141), Expect = 1e-09
Identities = 33/114 (28%), Positives = 58/114 (50%)
Frame = +2
Query: 404 KTFEDIGLKDNLVKVVKDLGFTLPTAIQTKAVPAILNGHNTVITAETGCGKTLAYLXPII 583
K F +G+ + + ++ + T +Q +P IL G + + A TG GKTLA+ PI+
Sbjct: 89 KKFSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPIL 148
Query: 584 QHILEWKPTIQEEFNSPLAVVITPNRELALQIGEVAQTIAQSININVTTLIGGK 745
Q + + A+++TP RELA QI E + + I + + ++GG+
Sbjct: 149 Q-------KLSVDPYGIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGR 195
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 60.9 bits (141), Expect = 1e-09
Identities = 37/111 (33%), Positives = 57/111 (51%)
Frame = +2
Query: 410 FEDIGLKDNLVKVVKDLGFTLPTAIQTKAVPAILNGHNTVITAETGCGKTLAYLXPIIQH 589
FED L +L+ + + G+ P+ IQ ++ L G + + A+ G GKT AY P+I+
Sbjct: 45 FEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEK 104
Query: 590 ILEWKPTIQEEFNSPLAVVITPNRELALQIGEVAQTIAQSININVTTLIGG 742
I IQ A+VI P RELALQ ++ +++ I + V GG
Sbjct: 105 IQPALKAIQ-------AMVIVPTRELALQTSQICVELSKHIQLKVMVTTGG 148
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 60.1 bits (139), Expect = 2e-09
Identities = 39/127 (30%), Positives = 68/127 (53%), Gaps = 7/127 (5%)
Frame = +2
Query: 320 GWLHNKSKGDYFIIH---GNANKKEETPVYRKTFEDIGLKDNLVKVV-KDLGFTLPTAIQ 487
G + +S+ DY I G + + + P +F ++ +L++ + K G PTAIQ
Sbjct: 158 GHIRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTAIQ 217
Query: 488 TKAVPAILNGHNTVITAETGCGKTLAYLXPIIQHILEWK---PTIQEEFNSPLAVVITPN 658
+ +P L+G + + A TG GKT+ ++ P++ LE + P ++ E P ++I P+
Sbjct: 218 IQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSE--GPFGLIIVPS 275
Query: 659 RELALQI 679
RELA QI
Sbjct: 276 RELARQI 282
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 59.7 bits (138), Expect = 3e-09
Identities = 36/115 (31%), Positives = 59/115 (51%), Gaps = 2/115 (1%)
Frame = +2
Query: 404 KTFEDIGLKDNLVKVVKDLGFTLPTAIQTKAVPAILNGHNTVITAETGCGKTLAYLXPII 583
K+F D + ++ + V+ G+T T IQ +P + +G + + A+TG GKT A+L PI+
Sbjct: 298 KSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIM 357
Query: 584 QH-ILEWKPTIQEEFNS-PLAVVITPNRELALQIGEVAQTIAQSININVTTLIGG 742
ILE E P +++TP RELA QI + + + + + GG
Sbjct: 358 SRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGG 412
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 59.7 bits (138), Expect = 3e-09
Identities = 36/115 (31%), Positives = 59/115 (51%), Gaps = 2/115 (1%)
Frame = +2
Query: 404 KTFEDIGLKDNLVKVVKDLGFTLPTAIQTKAVPAILNGHNTVITAETGCGKTLAYLXPII 583
K+F D + ++ + V+ G+T T IQ +P + +G + + A+TG GKT A+L PI+
Sbjct: 298 KSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIM 357
Query: 584 QH-ILEWKPTIQEEFNS-PLAVVITPNRELALQIGEVAQTIAQSININVTTLIGG 742
ILE E P +++TP RELA QI + + + + + GG
Sbjct: 358 SRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGG 412
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 58.8 bits (136), Expect = 5e-09
Identities = 42/124 (33%), Positives = 70/124 (56%), Gaps = 1/124 (0%)
Frame = +2
Query: 392 PVYRKTFEDIGLKDNLVKVVKDLGFTLPTAIQTKAVPAILNGHNTVITAETGCGKTLAYL 571
PV KTF + L L++V D + T +Q + +LN + V+ + TG GKTLA++
Sbjct: 7 PVALKTFRE-KLGPELLEVF-DKSYKSFTDVQVLSGTHLLNLSDVVVESPTGSGKTLAFV 64
Query: 572 XPIIQHILEWKPTIQEEFNSPLAVVITPNRELALQIGEVAQTIAQSININVTTLIGGKR- 748
P+++ I K +Q A++++P+REL QI V Q A+ +N+ V T+ GG++
Sbjct: 65 LPMMRMIQNAK--LQPADIG--ALILSPSRELCSQIVSVIQPFAEKLNLTVETVTGGQKV 120
Query: 749 KKNV 760
KN+
Sbjct: 121 DKNI 124
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 58.4 bits (135), Expect = 7e-09
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Frame = +2
Query: 410 FEDIGLKDNLVKVVKDLGFTLPTAIQTKAVPAILNGHNTVITAETGCGKTLAYLXPIIQH 589
F D + +L+ + + P+ IQ +++P + N + +A TG GKTLA+ P+I
Sbjct: 128 FSDSSMSPSLLNRLSENSIRQPSPIQMQSIPFMTERRNVLASAPTGSGKTLAFALPVIDE 187
Query: 590 ILEWKPTIQ-EEFNSP--LAVVITPNRELALQ 676
ILE K NS LAVV+ P RELA Q
Sbjct: 188 ILELKQRADYSSSNSSKLLAVVLEPTRELAAQ 219
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 56.4 bits (130), Expect = 3e-08
Identities = 38/135 (28%), Positives = 70/135 (51%), Gaps = 2/135 (1%)
Frame = +2
Query: 407 TFEDIGLKDNLVKVVKDLGFTLPTAIQTKAVPAILNGHNTVITAETGCGKTLAYLXPIIQ 586
TFE + + ++ +K+ F P+ +Q +A+P L G + ++ A++G GKTL + ++
Sbjct: 23 TFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVE 82
Query: 587 HILEWKPTIQEEFNSPLAVVITPNRELALQIGEVAQTIAQSININVTTLIGGK-RKKNVX 763
++ IQ+ V++TP RE+++QI E + +A + + +GG K N+
Sbjct: 83 NLDSRSSHIQK-------VIVTPTREISVQIKETVRKVAPT-GARTSVYVGGSAHKLNLI 134
Query: 764 XL-QLSP*XXITTLG 805
L Q P I T G
Sbjct: 135 DLKQTRPQIVIGTPG 149
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 56.4 bits (130), Expect = 3e-08
Identities = 38/135 (28%), Positives = 70/135 (51%), Gaps = 2/135 (1%)
Frame = +2
Query: 407 TFEDIGLKDNLVKVVKDLGFTLPTAIQTKAVPAILNGHNTVITAETGCGKTLAYLXPIIQ 586
TFE + + ++ +K+ F P+ +Q +A+P L G + ++ A++G GKTL + ++
Sbjct: 23 TFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVE 82
Query: 587 HILEWKPTIQEEFNSPLAVVITPNRELALQIGEVAQTIAQSININVTTLIGGK-RKKNVX 763
++ IQ+ V++TP RE+++QI E + +A + + +GG K N+
Sbjct: 83 NLDSRSSHIQK-------VIVTPTREISVQIKETVRKVAPT-GARTSVYVGGSAHKLNLI 134
Query: 764 XL-QLSP*XXITTLG 805
L Q P I T G
Sbjct: 135 DLKQTRPQIVIGTPG 149
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 54.8 bits (126), Expect = 8e-08
Identities = 38/120 (31%), Positives = 57/120 (47%), Gaps = 4/120 (3%)
Frame = +2
Query: 425 LKDNLVKVVKDLGFTLPTAIQTKAVPAILNGHNTVITAETGCGKTLAYLXPIIQHILEW- 601
L DNL K + PT IQ + I++G++ V A TG GKTLA+L P + ++E
Sbjct: 747 LHDNL----KRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEF 802
Query: 602 --KPTIQEEFNSPLAVVITPNRELALQIGEVAQTIAQSININVTTLIGG-KRKKNVXXLQ 772
+ +E SP +++ P REL Q A+ + + GG R NV L+
Sbjct: 803 EKDRDVTDEKPSPRLLIVAPTRELVNQTFTTARQLTYETGLKCGLAFGGYSRNANVQHLR 862
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 54.8 bits (126), Expect = 8e-08
Identities = 38/120 (31%), Positives = 57/120 (47%), Gaps = 4/120 (3%)
Frame = +2
Query: 425 LKDNLVKVVKDLGFTLPTAIQTKAVPAILNGHNTVITAETGCGKTLAYLXPIIQHILEW- 601
L DNL K + PT IQ + I++G++ V A TG GKTLA+L P + ++E
Sbjct: 747 LHDNL----KRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEF 802
Query: 602 --KPTIQEEFNSPLAVVITPNRELALQIGEVAQTIAQSININVTTLIGG-KRKKNVXXLQ 772
+ +E SP +++ P REL Q A+ + + GG R NV L+
Sbjct: 803 EKDRDVTDEKPSPRLLIVAPTRELVNQTFTTARQLTYETGLKCGLAFGGYSRNANVQHLR 862
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 54.0 bits (124), Expect = 1e-07
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 4/123 (3%)
Frame = +2
Query: 386 ETPVYR-KTFEDIGLKDNLVKVVKDLGFTLPTAIQTKAVPAIL--NGHNTVITAETGCGK 556
++P+Y +F ++ LK ++K + + F PT IQ A+P +L N + A++G GK
Sbjct: 202 KSPLYSISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGK 261
Query: 557 TLAYLXPIIQHILEWKPTIQEEFNSPLAVVITPNRELALQIGEVAQTIAQSI-NINVTTL 733
T A+ +L I P + + P ELA QIGEV + + + I N+ +
Sbjct: 262 TAAF-------VLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYA 314
Query: 734 IGG 742
I G
Sbjct: 315 IKG 317
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 54.0 bits (124), Expect = 1e-07
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 4/123 (3%)
Frame = +2
Query: 386 ETPVYR-KTFEDIGLKDNLVKVVKDLGFTLPTAIQTKAVPAIL--NGHNTVITAETGCGK 556
++P+Y +F ++ LK ++K + + F PT IQ A+P +L N + A++G GK
Sbjct: 227 KSPLYSISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGK 286
Query: 557 TLAYLXPIIQHILEWKPTIQEEFNSPLAVVITPNRELALQIGEVAQTIAQSI-NINVTTL 733
T A+ +L I P + + P ELA QIGEV + + + I N+ +
Sbjct: 287 TAAF-------VLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYA 339
Query: 734 IGG 742
I G
Sbjct: 340 IKG 342
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 54.0 bits (124), Expect = 1e-07
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 4/123 (3%)
Frame = +2
Query: 386 ETPVYR-KTFEDIGLKDNLVKVVKDLGFTLPTAIQTKAVPAIL--NGHNTVITAETGCGK 556
++P+Y +F ++ LK ++K + + F PT IQ A+P +L N + A++G GK
Sbjct: 611 KSPLYSISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGK 670
Query: 557 TLAYLXPIIQHILEWKPTIQEEFNSPLAVVITPNRELALQIGEVAQTIAQSI-NINVTTL 733
T A+ +L I P + + P ELA QIGEV + + + I N+ +
Sbjct: 671 TAAF-------VLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYA 723
Query: 734 IGG 742
I G
Sbjct: 724 IKG 726
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 50.0 bits (114), Expect = 2e-06
Identities = 30/103 (29%), Positives = 53/103 (51%)
Frame = +2
Query: 425 LKDNLVKVVKDLGFTLPTAIQTKAVPAILNGHNTVITAETGCGKTLAYLXPIIQHILEWK 604
LK+ L++ + GF P+AIQ AV G + I ++ G GKT+ L I+Q I
Sbjct: 3 LKEELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGIDCED 62
Query: 605 PTIQEEFNSPLAVVITPNRELALQIGEVAQTIAQSININVTTL 733
+Q +++ P R +A + E +++ +++N+N T L
Sbjct: 63 AHLQ-------VILLAPQRGMAQRAHEQLKSLGRNLNVNATCL 98
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 39.1 bits (87), Expect = 0.004
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = +2
Query: 479 AIQTKAVPAILNGHNTVITAETGCGKTLAYLXPIIQHILEWKPTIQEEFNSPLAVVI 649
A+Q K++ AI + ++ A TG GKT A+L P I+ L +P + +P ++
Sbjct: 117 AVQQKSIQAIRDRRGLLVDAPTGIGKTYAFLIPAIEIALRERPLLTNISTTPSPTIL 173
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 38.7 bits (86), Expect = 0.006
Identities = 21/66 (31%), Positives = 34/66 (51%)
Frame = +2
Query: 437 LVKVVKDLGFTLPTAIQTKAVPAILNGHNTVITAETGCGKTLAYLXPIIQHILEWKPTIQ 616
+V +K + T A+Q ++ I G V+ A TG GKT A+L P I+ L+ + +
Sbjct: 104 IVNNLKCVHVTTFNAVQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIEAALKNRQSNC 163
Query: 617 EEFNSP 634
E+ P
Sbjct: 164 FEYTKP 169
>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
helicase protein.
Length = 1037
Score = 31.5 bits (68), Expect = 0.86
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = +2
Query: 485 QTKAVPAILNGHNTVITAETGCGKTLAYLXPIIQHILEWKPTIQEEFNSPLAVVITPN 658
Q + L G NT++TA TG GKT+ I +H E + + + F A+ +TPN
Sbjct: 297 QEELCQVALQGKNTIVTAPTGSGKTVIAANIIKEH-FESRSSEGKRFK---ALFMTPN 350
>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
helicase protein 1 protein.
Length = 1037
Score = 31.5 bits (68), Expect = 0.86
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = +2
Query: 485 QTKAVPAILNGHNTVITAETGCGKTLAYLXPIIQHILEWKPTIQEEFNSPLAVVITPN 658
Q + L G NT++TA TG GKT+ I +H E + + + F A+ +TPN
Sbjct: 297 QEELCQVALQGKNTIVTAPTGSGKTVIAANIIKEH-FESRSSEGKRFK---ALFMTPN 350
>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical
protein D2005.5 protein.
Length = 1119
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +2
Query: 485 QTKAVPAILNGHNTVITAETGCGKTLAYLXPIIQHILE 598
Q + V L G N VI A TG GKT + ++HI E
Sbjct: 375 QEELVQPALEGKNCVIVAPTGSGKTEVAIYAALKHIEE 412
>Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical
protein T04A11.6 protein.
Length = 988
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 485 QTKAVPAILNGHNTVITAETGCGKTLAYLXPII 583
Q + + + L GH+T + TG GK+L Y P +
Sbjct: 252 QKQCILSTLMGHDTFVLMPTGAGKSLCYQLPAV 284
>Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical
protein T07D4.3 protein.
Length = 1301
Score = 30.7 bits (66), Expect = 1.5
Identities = 28/92 (30%), Positives = 40/92 (43%), Gaps = 1/92 (1%)
Frame = +2
Query: 413 EDIGLKDNLVKVVKDLGFTLPTA-IQTKAVPAILNGHNTVITAETGCGKTLAYLXPIIQH 589
ED + L K+ G LP A + V + T+I ETGCGK+ +++
Sbjct: 363 EDFKRGEALDKITAQRG-ELPVAQYRENIVQTVAENRVTLIKGETGCGKSTQVAQFLLES 421
Query: 590 ILEWKPTIQEEFNSPLAVVITPNRELALQIGE 685
LE + FN AVV P R A+ + E
Sbjct: 422 FLE--NSNGASFN---AVVSQPRRISAISLAE 448
>AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase
protein.
Length = 988
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 485 QTKAVPAILNGHNTVITAETGCGKTLAYLXPII 583
Q + + + L GH+T + TG GK+L Y P +
Sbjct: 252 QKQCILSTLMGHDTFVLMPTGAGKSLCYQLPAV 284
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 29.5 bits (63), Expect = 3.5
Identities = 20/70 (28%), Positives = 31/70 (44%)
Frame = +2
Query: 470 LPTAIQTKAVPAILNGHNTVITAETGCGKTLAYLXPIIQHILEWKPTIQEEFNSPLAVVI 649
LP+ P L + I A TG GKT+ Y+ P++ + I + AV++
Sbjct: 141 LPSLFFEIRSPPPLRPRDVAIAAPTGSGKTICYVLPVLAAVGSKPSKILQ------AVIL 194
Query: 650 TPNRELALQI 679
P + L QI
Sbjct: 195 VPVQTLVAQI 204
>U80027-18|AAC48115.1| 198|Caenorhabditis elegans Hypothetical
protein T28A11.3 protein.
Length = 198
Score = 28.3 bits (60), Expect = 8.0
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +1
Query: 163 KLRQLISTSYSRYYSLQQAKKKLPIITCKRPEFNHYEGQSYSKYEG 300
K+ QL + Y+ KK I TC +PE++ + Q + Y G
Sbjct: 142 KVEQLKKDTCKNYFGKDDCMKKEVIETCSQPEWDKFSEQ-FINYSG 186
>AF067949-10|AAC19239.4| 304|Caenorhabditis elegans Seven tm
receptor protein 180,isoform a protein.
Length = 304
Score = 28.3 bits (60), Expect = 8.0
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -3
Query: 341 LIYCVATPCEASFIPSYLL*LCPS**LNSGRLHVII 234
L++ P +IPS L+ +CP +N GR+ V+I
Sbjct: 235 LVWQTVIPIFMVYIPSSLILICPLFNINLGRISVVI 270
>AF067949-9|AAX22283.1| 323|Caenorhabditis elegans Seven tm
receptor protein 180,isoform b protein.
Length = 323
Score = 28.3 bits (60), Expect = 8.0
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -3
Query: 341 LIYCVATPCEASFIPSYLL*LCPS**LNSGRLHVII 234
L++ P +IPS L+ +CP +N GR+ V+I
Sbjct: 254 LVWQTVIPIFMVYIPSSLILICPLFNINLGRISVVI 289
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,288,308
Number of Sequences: 27780
Number of extensions: 368903
Number of successful extensions: 927
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 884
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2318293978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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