Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_I20
         (913 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1815 - 40064351-40064887,40064987-40065634,40065834-400658...    34   0.14 

>01_06_1815 -
           40064351-40064887,40064987-40065634,40065834-40065890,
           40065921-40065941,40066714-40066941
          Length = 496

 Score = 34.3 bits (75), Expect = 0.14
 Identities = 29/95 (30%), Positives = 43/95 (45%)
 Frame = -3

Query: 566 LCFQHYSILSGKIVCLETSSSILSYNRRFSHLLCYGHTCAFFLQANDFWTWNVCGSHDFP 387
           +CF    IL+   +  + SS+  S      +L+  G  C F   A  F T N  G     
Sbjct: 349 MCFGILMILAIAWLAFQRSSTTGSNMPITFNLILLGIICGF---AGRFCT-NTLGGDGNT 404

Query: 386 WI*CWQNLCLVNLIHLMKN*ILHCVYHNLYLPLTV 282
           W+  W+ LC    IHL+ N     +YH L+ P++V
Sbjct: 405 WLMYWEVLCS---IHLLGNLFPSLLYHVLHGPISV 436


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,881,434
Number of Sequences: 37544
Number of extensions: 202960
Number of successful extensions: 393
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 389
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 393
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)