Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_I17
         (946 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0686 - 30900748-30902167,30903442-30904742                       31   1.8  
01_01_0895 + 7052118-7053110,7053249-7053252,7054450-7055189           29   5.4  

>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 19/63 (30%), Positives = 19/63 (30%)
 Frame = +1

Query: 253 PPPXXXQKXXKXXXPPPXXKKXXGKKXXPXXGGXPPXGGGGXPXKKKXXXXGGXXPXKXG 432
           PPP    K      PPP   K       P  G  PP    G P            P   G
Sbjct: 313 PPPPPPPKPAAAAPPPPPPPKA-APPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPG 371

Query: 433 GKK 441
           GKK
Sbjct: 372 GKK 374


>01_01_0895 + 7052118-7053110,7053249-7053252,7054450-7055189
          Length = 578

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +1

Query: 577 KKKXPPPXGXGGXXXGAPPXP 639
           KK+ PPP G GG     PP P
Sbjct: 32  KKRPPPPCGDGGRRLPLPPSP 52


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,016,450
Number of Sequences: 37544
Number of extensions: 234153
Number of successful extensions: 579
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 403
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 553
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2717819680
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)