Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_I17
(946 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 2.1
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 2.1
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 2.1
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 2.8
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 2.8
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 2.8
U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific ... 29 3.7
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 4.8
AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical ... 29 6.4
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 29 6.4
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 29 6.4
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 6.4
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Frame = -3
Query: 434 PPXFXGXXPPXXXFFFXXGXPPPPX-GGXPPXXG 336
PP G PP G PPPP GG PP G
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITG 740
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Frame = -3
Query: 434 PPXFXGXXPPXXXFFFXXGXPPPPX-GGXPPXXG 336
PP G PP G PPPP GG PP G
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITG 740
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Frame = -3
Query: 434 PPXFXGXXPPXXXFFFXXGXPPPPX-GGXPPXXG 336
PP G PP G PPPP GG PP G
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITG 323
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = +1
Query: 253 PPPXXXQKXXKXXXPPPXXKKXXGKKXXPXXGGXPPXGGGGXP 381
PPP + PPP G P GG PP G G P
Sbjct: 289 PPPP--RAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSP 329
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = +1
Query: 253 PPPXXXQKXXKXXXPPPXXKKXXGKKXXPXXGGXPPXGGGGXP 381
PPP + PPP G P GG PP G G P
Sbjct: 310 PPPP--RAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSP 350
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = +1
Query: 253 PPPXXXQKXXKXXXPPPXXKKXXGKKXXPXXGGXPPXGGGGXP 381
PPP + PPP G P GG PP G G P
Sbjct: 295 PPPP--RAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSP 335
>U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific
family, class qprotein 4 protein.
Length = 373
Score = 29.5 bits (63), Expect = 3.7
Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = +1
Query: 346 GGXPPXGGGGXPXKKKXXXXG-GXXPXKXGGKKXFFXXKGGXVGGFG 483
GG GGGG P G G G + +F GG VGG G
Sbjct: 32 GGNKSAGGGGAPPPGVSCYLGAGAGGAASGSQSAYFGVGGGPVGGGG 78
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Frame = -3
Query: 434 PPXFXGXXPPXXXFFFXXGXPPPPX-GGXPP 345
PP G PP F PPPP GG PP
Sbjct: 76 PPPGPGGIPPPPPMFAGGIPPPPPMMGGIPP 106
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -3
Query: 434 PPXFXGXXPPXXXFFFXXGXPPPPXGGXPP 345
PP F G PP PPP G PP
Sbjct: 87 PPMFAGGIPPPPPMMGGIPPPPPMFGAPPP 116
>AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical
protein Y66H1A.4 protein.
Length = 244
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +1
Query: 346 GGXPPXGGGGXPXKKKXXXXGGXXPXKXGGKKXFFXXKGGXVGGFG 483
GG GGGG + GG + G + F +GG GG G
Sbjct: 175 GGFGRGGGGGFRGGDRGGFGGGRGGFRGGDRGGFRGGRGGDFGGRG 220
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 28.7 bits (61), Expect = 6.4
Identities = 19/58 (32%), Positives = 19/58 (32%), Gaps = 5/58 (8%)
Frame = -3
Query: 440 FXPPXFXGXXPPXXXFFFXXG-----XPPPPXGGXPPXXGXXFFPXXFFXXGGGXXXF 282
F PP G PP F G PPPP G P G P GG F
Sbjct: 295 FFPPPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGGPYPPF 352
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 28.7 bits (61), Expect = 6.4
Identities = 19/58 (32%), Positives = 19/58 (32%), Gaps = 5/58 (8%)
Frame = -3
Query: 440 FXPPXFXGXXPPXXXFFFXXG-----XPPPPXGGXPPXXGXXFFPXXFFXXGGGXXXF 282
F PP G PP F G PPPP G P G P GG F
Sbjct: 295 FFPPPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGGPYPPF 352
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.7 bits (61), Expect = 6.4
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -3
Query: 434 PPXFXGXXPPXXXFFFXXGXPPPPXGGXPP 345
PP G PP PPPP GG PP
Sbjct: 1585 PPPLMGGPPPRLGM--PPPGPPPPNGGPPP 1612
Score = 23.4 bits (48), Expect(2) = 8.4
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +1
Query: 589 PPPXGXGGXXXGAPPXPXKKXXXQG 663
PPP G G PP P QG
Sbjct: 1560 PPPHGGMNGWRGGPPPPRGGSHCQG 1584
Score = 23.0 bits (47), Expect(2) = 8.4
Identities = 18/75 (24%), Positives = 20/75 (26%)
Frame = +1
Query: 256 PPXXXQKXXKXXXPPPXXKKXXGKKXXPXXGGXPPXGGGGXPXKKKXXXXGGXXPXKXGG 435
PP + PP P GG PP GG P + G P G
Sbjct: 1457 PPLGMMRGRGGPPPPRGMNSPMRGMPPPMRGGGPPM-RGGPPMRGGPPMFRGGPPGPGRG 1515
Query: 436 KKXFFXXKGGXVGGF 480
GGF
Sbjct: 1516 MPSPMMRGSSMRGGF 1530
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,483,749
Number of Sequences: 27780
Number of extensions: 143736
Number of successful extensions: 515
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 201
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 449
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2444174194
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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